RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 SYNE4Q8N205 404 aa27.15■■□□□ 1.94
MTCL1-204ENST00000517554 ZNF622Q969S3 477 aaKnown RBP eCLIP27.14■■□□□ 1.94
MTCL1-204ENST00000517554 UTP14AQ9BVJ6 771 aaKnown RBP27.14■■□□□ 1.94
MTCL1-204ENST00000517554 PDZRN3Q9UPQ7 1066 aa27.14■■□□□ 1.94
MTCL1-204ENST00000517554 ADCY9O60503 1353 aa27.14■■□□□ 1.93
MTCL1-204ENST00000517554 C3orf67Q6ZVT6 689 aa27.14■■□□□ 1.93
MTCL1-204ENST00000517554 TTLL6Q8N841 843 aa27.14■■□□□ 1.93
MTCL1-204ENST00000517554 ARFGEF1Q9Y6D6 1849 aa27.13■■□□□ 1.93
MTCL1-204ENST00000517554 RIC1Q4ADV7 1423 aa27.13■■□□□ 1.93
MTCL1-204ENST00000517554 YY1P25490 414 aa27.12■■□□□ 1.93
MTCL1-204ENST00000517554 PI4KAP2A4QPH2 592 aa27.11■■□□□ 1.93
MTCL1-204ENST00000517554 FLIIQ13045 1269 aa27.11■■□□□ 1.93
MTCL1-204ENST00000517554 TRIM28Q13263 835 aaKnown RBP27.11■■□□□ 1.93
MTCL1-204ENST00000517554 CRY2Q49AN0 593 aa27.11■■□□□ 1.93
MTCL1-204ENST00000517554 STYK1Q6J9G0 422 aa27.11■■□□□ 1.93
MTCL1-204ENST00000517554 KSR2Q6VAB6 950 aa27.11■■□□□ 1.93
MTCL1-204ENST00000517554 PI4KAP1Q8N8J0 262 aa27.11■■□□□ 1.93
MTCL1-204ENST00000517554 MASTLQ96GX5 879 aa27.11■■□□□ 1.93
MTCL1-204ENST00000517554 MAP3K2Q9Y2U5 619 aa27.11■■□□□ 1.93
MTCL1-204ENST00000517554 SLC10A5Q5PT55 438 aa27.1■■□□□ 1.93
MTCL1-204ENST00000517554 MYD88Q99836 296 aa27.1■■□□□ 1.93
MTCL1-204ENST00000517554 METTL22Q9BUU2 404 aaPredicted RBP27.1■■□□□ 1.93
MTCL1-204ENST00000517554 TRMT112Q9UI30 125 aaKnown RBP27.1■■□□□ 1.93
MTCL1-204ENST00000517554 DDX58O95786 925 aaKnown RBP27.09■■□□□ 1.93
MTCL1-204ENST00000517554 CHD4Q14839 1912 aa27.09■■□□□ 1.93
MTCL1-204ENST00000517554 ARHGAP27Q6ZUM4 889 aa27.09■■□□□ 1.93
MTCL1-204ENST00000517554 NPR1P16066 1061 aa27.08■■□□□ 1.93
MTCL1-204ENST00000517554 RNF123Q5XPI4 1314 aa27.08■■□□□ 1.93
MTCL1-204ENST00000517554 HCLS1P14317 486 aaPredicted RBP27.07■■□□□ 1.92
MTCL1-204ENST00000517554 HNRNPUQ00839 825 aaKnown RBP eCLIP27.07■■□□□ 1.92
MTCL1-204ENST00000517554 IGKV5-2P06315 115 aa27.06■■□□□ 1.92
MTCL1-204ENST00000517554 PRPF40BQ6NWY9 871 aaKnown RBP27.06■■□□□ 1.92
MTCL1-204ENST00000517554 CNKSR1Q969H4 720 aa27.06■■□□□ 1.92
MTCL1-204ENST00000517554 FAM89AQ96GI7 184 aa27.06■■□□□ 1.92
MTCL1-204ENST00000517554 SLX4Q8IY92 1834 aa27.06■■□□□ 1.92
MTCL1-204ENST00000517554 SH3TC1Q8TE82 1336 aa27.06■■□□□ 1.92
MTCL1-204ENST00000517554 ZNF219Q9P2Y4 722 aaPredicted RBP27.05■■□□□ 1.92
MTCL1-204ENST00000517554 C21orf2O43822 256 aa27.04■■□□□ 1.92
MTCL1-204ENST00000517554 HOXA10P31260 410 aaPredicted RBP27.04■■□□□ 1.92
MTCL1-204ENST00000517554 FKBP5Q13451 457 aaPredicted RBP27.04■■□□□ 1.92
MTCL1-204ENST00000517554 RTL5Q5HYW3 569 aaPredicted RBP27.04■■□□□ 1.92
MTCL1-204ENST00000517554 C7orf43Q8WVR3 580 aa27.04■■□□□ 1.92
MTCL1-204ENST00000517554 CCDC191Q8NCU4 936 aa27.03■■□□□ 1.92
MTCL1-204ENST00000517554 NLRP3Q96P20 1036 aa27.03■■□□□ 1.92
MTCL1-204ENST00000517554 PRELPP51888 382 aa27.01■■□□□ 1.92
MTCL1-204ENST00000517554 CWF19L2Q2TBE0 894 aaKnown RBP27.01■■□□□ 1.92
MTCL1-204ENST00000517554 MRPL50Q8N5N7 158 aaKnown RBP27.01■■□□□ 1.92
MTCL1-204ENST00000517554 SSH1Q8WYL5 1049 aa27.01■■□□□ 1.92
MTCL1-204ENST00000517554 CACNA1FO60840 1977 aa27.01■■□□□ 1.91
MTCL1-204ENST00000517554 CACNA1SQ13698 1873 aa27.01■■□□□ 1.91
MTCL1-204ENST00000517554 DDX60Q8IY21 1712 aaKnown RBP27.01■■□□□ 1.91
MTCL1-204ENST00000517554 NFKBIEO00221 500 aa27.01■■□□□ 1.91
MTCL1-204ENST00000517554 OLFM4Q6UX06 510 aa27.01■■□□□ 1.91
MTCL1-204ENST00000517554 SLC51AQ86UW1 340 aa27.01■■□□□ 1.91
MTCL1-204ENST00000517554 JARID2Q92833 1246 aaPredicted RBP27.01■■□□□ 1.91
MTCL1-204ENST00000517554 LAMB2P55268 1798 aa27■■□□□ 1.91
MTCL1-204ENST00000517554 F6X3S4 739 aa27■■□□□ 1.91
MTCL1-204ENST00000517554 RASSF7Q02833 373 aa27■■□□□ 1.91
MTCL1-204ENST00000517554 ZBTB38Q8NAP3 1195 aaPredicted RBP27■■□□□ 1.91
MTCL1-204ENST00000517554 DNAAF4Q8WXU2 420 aa27■■□□□ 1.91
MTCL1-204ENST00000517554 CWC25Q9NXE8 425 aaPredicted RBP27■■□□□ 1.91
MTCL1-204ENST00000517554 RPGRQ92834 1020 aaKnown RBP26.99■■□□□ 1.91
MTCL1-204ENST00000517554 NEURL1BA8MQ27 555 aa26.98■■□□□ 1.91
MTCL1-204ENST00000517554 ALDH1B1P30837 517 aa26.98■■□□□ 1.91
MTCL1-204ENST00000517554 PCCAP05165 728 aaPredicted RBP26.97■■□□□ 1.91
MTCL1-204ENST00000517554 CRAMP1Q96RY5 1269 aa26.97■■□□□ 1.91
MTCL1-204ENST00000517554 IRS4O14654 1257 aaPredicted RBP26.97■■□□□ 1.91
MTCL1-204ENST00000517554 NEXNQ0ZGT2 675 aa26.97■■□□□ 1.91
MTCL1-204ENST00000517554 BCL2L13Q9BXK5 485 aa26.97■■□□□ 1.91
MTCL1-204ENST00000517554 ZNF784Q8NCA9 323 aaPredicted RBP26.96■■□□□ 1.91
MTCL1-204ENST00000517554 RBM17Q96I25 401 aaKnown RBP26.96■■□□□ 1.91
MTCL1-204ENST00000517554 ABCC4O15439 1325 aa26.94■■□□□ 1.9
MTCL1-204ENST00000517554 SNED1Q8TER0 1413 aa26.94■■□□□ 1.9
MTCL1-204ENST00000517554 BEND3Q5T5X7 828 aa26.94■■□□□ 1.9
MTCL1-204ENST00000517554 C9orf131Q5VYM1 1079 aa26.94■■□□□ 1.9
MTCL1-204ENST00000517554 SF3B3Q15393 1217 aaKnown RBP26.93■■□□□ 1.9
MTCL1-204ENST00000517554 LINS1Q8NG48 757 aa26.93■■□□□ 1.9
MTCL1-204ENST00000517554 FER1L6Q2WGJ9 1857 aa26.93■■□□□ 1.9
MTCL1-204ENST00000517554 COL4A1P02462 1669 aa26.93■■□□□ 1.9
MTCL1-204ENST00000517554 GCKRQ14397 625 aa26.92■■□□□ 1.9
MTCL1-204ENST00000517554 ALDH1L2Q3SY69 923 aa26.92■■□□□ 1.9
MTCL1-204ENST00000517554 ZBED9Q6R2W3 1325 aa26.92■■□□□ 1.9
MTCL1-204ENST00000517554 SBF1O95248 1867 aa26.92■■□□□ 1.9
MTCL1-204ENST00000517554 H7C1W4 665 aa26.92■■□□□ 1.9
MTCL1-204ENST00000517554 CT47B1P0C2W7 299 aaPredicted RBP26.92■■□□□ 1.9
MTCL1-204ENST00000517554 CDHR2Q9BYE9 1310 aa26.91■■□□□ 1.9
MTCL1-204ENST00000517554 CASP7P55210 303 aa26.9■■□□□ 1.9
MTCL1-204ENST00000517554 RNF181Q9P0P0 153 aa26.9■■□□□ 1.9
MTCL1-204ENST00000517554 CCDC93Q567U6 631 aa26.89■■□□□ 1.9
MTCL1-204ENST00000517554 SOGA3Q5TF21 947 aa26.89■■□□□ 1.9
MTCL1-204ENST00000517554 LTBP3Q9NS15 1303 aa26.89■■□□□ 1.9
MTCL1-204ENST00000517554 TAF1P21675 1872 aa26.89■■□□□ 1.89
MTCL1-204ENST00000517554 PPEF1O14829 653 aaPredicted RBP26.88■■□□□ 1.89
MTCL1-204ENST00000517554 LMNB1P20700 586 aa26.88■■□□□ 1.89
MTCL1-204ENST00000517554 DDX46Q7L014 1031 aaKnown RBP26.88■■□□□ 1.89
MTCL1-204ENST00000517554 UBE3BQ7Z3V4 1068 aa26.88■■□□□ 1.89
MTCL1-204ENST00000517554 SMC4Q9NTJ3 1288 aa26.88■■□□□ 1.89
MTCL1-204ENST00000517554 PDE8AO60658 829 aa26.88■■□□□ 1.89
MTCL1-204ENST00000517554 RARSP54136 660 aaKnown RBP26.88■■□□□ 1.89
MTCL1-204ENST00000517554 GRAPQ13588 217 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms