RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 FGFR3P22607 806 aa10.28□□□□□ -0.76
CPNE3-201ENST00000517354 TYRO3Q06418 890 aa10.28□□□□□ -0.76
CPNE3-201ENST00000517354 ZNF775Q96BV0 537 aaPredicted RBP10.28□□□□□ -0.76
CPNE3-201ENST00000517354 DMGDHQ9UI17 866 aaKnown RBP10.28□□□□□ -0.76
CPNE3-201ENST00000517354 PRR12Q9ULL5 1215 aa10.28□□□□□ -0.76
CPNE3-201ENST00000517354 OPLAHO14841 1288 aa10.27□□□□□ -0.77
CPNE3-201ENST00000517354 NPR3P17342 541 aa10.27□□□□□ -0.77
CPNE3-201ENST00000517354 MX2P20592 715 aa10.27□□□□□ -0.77
CPNE3-201ENST00000517354 DNM1Q05193 864 aaKnown RBP10.27□□□□□ -0.77
CPNE3-201ENST00000517354 SFSWAPQ12872 951 aaKnown RBP10.27□□□□□ -0.77
CPNE3-201ENST00000517354 GPR152Q8TDT2 470 aa10.27□□□□□ -0.77
CPNE3-201ENST00000517354 BRPF3Q9ULD4 1205 aa10.27□□□□□ -0.77
CPNE3-201ENST00000517354 FNDC3AQ9Y2H6 1198 aaKnown RBP10.27□□□□□ -0.77
CPNE3-201ENST00000517354 RTCBQ9Y3I0 505 aaKnown RBP10.27□□□□□ -0.77
CPNE3-201ENST00000517354 RPLP1P05386 114 aaKnown RBP10.26□□□□□ -0.77
CPNE3-201ENST00000517354 BMP4P12644 408 aa10.26□□□□□ -0.77
CPNE3-201ENST00000517354 INPP5BP32019 993 aa10.26□□□□□ -0.77
CPNE3-201ENST00000517354 NFX1Q12986 1120 aaKnown RBP10.26□□□□□ -0.77
CPNE3-201ENST00000517354 NEUROD1Q13562 356 aa10.26□□□□□ -0.77
CPNE3-201ENST00000517354 UBAP2LQ14157 1087 aaKnown RBP10.26□□□□□ -0.77
CPNE3-201ENST00000517354 ATCAYQ86WG3 371 aa10.26□□□□□ -0.77
CPNE3-201ENST00000517354 GPR161Q8N6U8 529 aaKnown RBP10.26□□□□□ -0.77
CPNE3-201ENST00000517354 COL25A1Q9BXS0 654 aaPredicted RBP10.26□□□□□ -0.77
CPNE3-201ENST00000517354 CD33P20138 364 aa10.25□□□□□ -0.77
CPNE3-201ENST00000517354 FAM26DQ5JW98 314 aa10.25□□□□□ -0.77
CPNE3-201ENST00000517354 NPM2Q86SE8 214 aaKnown RBP10.25□□□□□ -0.77
CPNE3-201ENST00000517354 TMC1Q8TDI8 760 aa10.25□□□□□ -0.77
CPNE3-201ENST00000517354 EDEM1Q92611 657 aa10.25□□□□□ -0.77
CPNE3-201ENST00000517354 PNMA5Q96PV4 448 aa10.25□□□□□ -0.77
CPNE3-201ENST00000517354 NDFIP2Q9NV92 336 aa10.25□□□□□ -0.77
CPNE3-201ENST00000517354 CTBSQ01459 385 aa10.24□□□□□ -0.77
CPNE3-201ENST00000517354 USP20Q9Y2K6 914 aa10.24□□□□□ -0.77
CPNE3-201ENST00000517354 CCDC9Q9Y3X0 531 aaKnown RBP10.24□□□□□ -0.77
CPNE3-201ENST00000517354 EFSO43281 561 aa10.23□□□□□ -0.77
CPNE3-201ENST00000517354 NDUFB5O43674 189 aa10.23□□□□□ -0.77
CPNE3-201ENST00000517354 VSIG8P0DPA2 414 aa10.23□□□□□ -0.77
CPNE3-201ENST00000517354 MZF1P28698 734 aaPredicted RBP10.23□□□□□ -0.77
CPNE3-201ENST00000517354 USP5P45974 858 aa10.23□□□□□ -0.77
CPNE3-201ENST00000517354 KCNQ4P56696 695 aa10.23□□□□□ -0.77
CPNE3-201ENST00000517354 C8orf34Q49A92 452 aa10.23□□□□□ -0.77
CPNE3-201ENST00000517354 ERBB4Q15303 1308 aa10.23□□□□□ -0.77
CPNE3-201ENST00000517354 CCINQ13939 588 aa10.22□□□□□ -0.77
CPNE3-201ENST00000517354 NUDT16Q96DE0 195 aaKnown RBP10.22□□□□□ -0.77
CPNE3-201ENST00000517354 CNTNAP3BQ96NU0 1288 aa10.22□□□□□ -0.77
CPNE3-201ENST00000517354 CNTNAP3Q9BZ76 1288 aa10.22□□□□□ -0.77
CPNE3-201ENST00000517354 STRN4Q9NRL3 753 aa10.22□□□□□ -0.77
CPNE3-201ENST00000517354 MBIPQ9NS73 344 aa10.22□□□□□ -0.77
CPNE3-201ENST00000517354 UBAP1LF5GYI3 381 aa10.21□□□□□ -0.77
CPNE3-201ENST00000517354 XYLBO75191 536 aa10.21□□□□□ -0.77
CPNE3-201ENST00000517354 MAP2K3P46734 347 aa10.21□□□□□ -0.77
CPNE3-201ENST00000517354 SPEM2Q0P670 501 aa10.21□□□□□ -0.77
CPNE3-201ENST00000517354 FAM182BQ5T319 152 aa10.21□□□□□ -0.77
CPNE3-201ENST00000517354 TREML4Q6UXN2 200 aa10.21□□□□□ -0.77
CPNE3-201ENST00000517354 SND1Q7KZF4 910 aaKnown RBP eCLIP10.21□□□□□ -0.77
CPNE3-201ENST00000517354 C11orf16Q9NQ32 467 aa10.21□□□□□ -0.77
CPNE3-201ENST00000517354 POLIQ9UNA4 740 aa10.21□□□□□ -0.77
CPNE3-201ENST00000517354 CCDC87Q9NVE4 849 aa10.2□□□□□ -0.78
CPNE3-201ENST00000517354 PDGFAP04085 211 aa10.19□□□□□ -0.78
CPNE3-201ENST00000517354 MAPK1P28482 360 aa10.19□□□□□ -0.78
CPNE3-201ENST00000517354 GMPRP36959 345 aa10.19□□□□□ -0.78
CPNE3-201ENST00000517354 KRT25Q7Z3Z0 450 aa10.19□□□□□ -0.78
CPNE3-201ENST00000517354 BHMTQ93088 406 aa10.19□□□□□ -0.78
CPNE3-201ENST00000517354 SASH3O75995 380 aa10.18□□□□□ -0.78
CPNE3-201ENST00000517354 MARSP56192 900 aaKnown RBP10.18□□□□□ -0.78
CPNE3-201ENST00000517354 ARHGAP4P98171 946 aa10.18□□□□□ -0.78
CPNE3-201ENST00000517354 EHHADHQ08426 723 aa10.18□□□□□ -0.78
CPNE3-201ENST00000517354 GAS6Q14393 721 aa10.18□□□□□ -0.78
CPNE3-201ENST00000517354 GSX2Q9BZM3 304 aa10.18□□□□□ -0.78
CPNE3-201ENST00000517354 EFCC1Q9HA90 598 aa10.18□□□□□ -0.78
CPNE3-201ENST00000517354 IGF1RP08069 1367 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 FZD6O60353 706 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 PDE3BQ13370 1112 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 ECM1Q16610 540 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 RNFT1Q5M7Z0 435 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 TMCO4Q5TGY1 634 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 TTC39BQ5VTQ0 682 aaPredicted RBP10.17□□□□□ -0.78
CPNE3-201ENST00000517354 ZSCAN29Q8IWY8 852 aaPredicted RBP10.17□□□□□ -0.78
CPNE3-201ENST00000517354 CITED4Q96RK1 184 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 SLC30A3Q99726 388 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 IGFLR1Q9H665 355 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 DCTN4Q9UJW0 460 aa10.17□□□□□ -0.78
CPNE3-201ENST00000517354 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.17□□□□□ -0.78
CPNE3-201ENST00000517354 GRIN2CQ14957 1233 aa10.16□□□□□ -0.78
CPNE3-201ENST00000517354 ZNF438Q7Z4V0 828 aa10.16□□□□□ -0.78
CPNE3-201ENST00000517354 C2CD2LO14523 706 aa10.15□□□□□ -0.78
CPNE3-201ENST00000517354 RARAP10276 462 aa10.15□□□□□ -0.78
CPNE3-201ENST00000517354 TARSP26639 723 aaKnown RBP10.15□□□□□ -0.78
CPNE3-201ENST00000517354 SRSF11Q05519 484 aaKnown RBP10.15□□□□□ -0.78
CPNE3-201ENST00000517354 CCDC27Q2M243 656 aa10.15□□□□□ -0.78
CPNE3-201ENST00000517354 RAB44Q7Z6P3 723 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-201ENST00000517354 NLRP13Q86W25 1043 aa10.15□□□□□ -0.78
CPNE3-201ENST00000517354 KCNMB2Q9Y691 235 aa10.15□□□□□ -0.78
CPNE3-201ENST00000517354 EGFRP00533 1210 aa10.14□□□□□ -0.79
CPNE3-201ENST00000517354 NEFLP07196 543 aa10.14□□□□□ -0.79
CPNE3-201ENST00000517354 NFKB1P19838 968 aa10.14□□□□□ -0.79
CPNE3-201ENST00000517354 PCBP4P57723 403 aaKnown RBP10.14□□□□□ -0.79
CPNE3-201ENST00000517354 TBC1D8BQ0IIM8 1120 aa10.14□□□□□ -0.79
CPNE3-201ENST00000517354 SYT9Q86SS6 491 aa10.14□□□□□ -0.79
CPNE3-201ENST00000517354 GGNBP2Q9H3C7 697 aa10.14□□□□□ -0.79
CPNE3-201ENST00000517354 ADAMTS2O95450 1211 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms