RNA–Protein interactions for RNA: ENST00000516581.1

RNU5F-4P-201, Transcript of RNA, U5F small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU5F-4P, Length 114 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5F-4P-201ENST00000516581 SNRPBP14678 240 aaKnown RBP3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 EPB42P16452 691 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 PCSK2P16519 638 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 ITGA6P23229 1130 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 GRNP28799 593 aaKnown RBP3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 FMR1Q06787 632 aaKnown RBP eCLIP3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 DBN1Q16643 649 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 PDE12Q6L8Q7 609 aaKnown RBP3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 NPAS3Q8IXF0 933 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 PIK3R5Q8WYR1 880 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 EDEM1Q92611 657 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 ZNF837Q96EG3 531 aaPredicted RBP3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 GAS2L1Q99501 681 aaPredicted RBP3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 ZCCHC2Q9C0B9 1178 aaKnown RBP3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 NUCKS1Q9H1E3 243 aaKnown RBP3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 EFCC1Q9HA90 598 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 GPAMQ9HCL2 828 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 NEUROD4Q9HD90 331 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 POLIQ9UNA4 740 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 PCDHGC4Q9Y5F7 938 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 KCNMB2Q9Y691 235 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 GJA3Q9Y6H8 435 aa3.84□□□□□ -1.79
RNU5F-4P-201ENST00000516581 C11orf95C9JLR9 678 aaPredicted RBP3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 GPR182O15218 404 aa3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ATXN7O15265 892 aaPredicted RBP3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 TNP2Q05952 138 aa3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 FAM182BQ5T319 152 aa3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 FBXO33Q7Z6M2 555 aa3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 GPR152Q8TDT2 470 aa3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 NUDT16Q96DE0 195 aaKnown RBP3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 CEP63Q96MT8 703 aa3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 CFHR5Q9BXR6 569 aa3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 BRD7Q9NPI1 651 aa3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 CUEDC1Q9NWM3 386 aaPredicted RBP3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ATXN7L1Q9ULK2 861 aaPredicted RBP3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 FNDC3AQ9Y2H6 1198 aaKnown RBP3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 RTCBQ9Y3I0 505 aaKnown RBP3.83□□□□□ -1.8
RNU5F-4P-201ENST00000516581 PPFIA3O75145 1194 aa3.82□□□□□ -1.8
RNU5F-4P-201ENST00000516581 FGD1P98174 961 aa3.82□□□□□ -1.8
RNU5F-4P-201ENST00000516581 DNM1Q05193 864 aaKnown RBP3.82□□□□□ -1.8
RNU5F-4P-201ENST00000516581 AAMPQ13685 434 aa3.82□□□□□ -1.8
RNU5F-4P-201ENST00000516581 TRIP4Q15650 581 aaPredicted RBP3.82□□□□□ -1.8
RNU5F-4P-201ENST00000516581 RIPOR1Q6ZS17 1223 aa3.82□□□□□ -1.8
RNU5F-4P-201ENST00000516581 GGNBP2Q9H3C7 697 aa3.82□□□□□ -1.8
RNU5F-4P-201ENST00000516581 HCN2Q9UL51 889 aa3.82□□□□□ -1.8
RNU5F-4P-201ENST00000516581 KCNH4Q9UQ05 1017 aa3.82□□□□□ -1.8
RNU5F-4P-201ENST00000516581 POTECB2RU33 542 aa3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 BNIP3LO60238 219 aa3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 NEFLP07196 543 aa3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 VSIG8P0DPA2 414 aa3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 MAPTP10636 758 aaKnown RBP3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 GSX2Q9BZM3 304 aa3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 DNAJC25Q9H1X3 360 aa3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 MARK1Q9P0L2 795 aa3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 NXF1Q9UBU9 619 aaKnown RBP3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 PHF24Q9UPV7 400 aa3.81□□□□□ -1.8
RNU5F-4P-201ENST00000516581 UBAP1LF5GYI3 381 aa3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 KHNYNO15037 678 aaKnown RBP3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 XYLBO75191 536 aa3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 TNFRSF21O75509 655 aa3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 P4HBP07237 508 aaKnown RBP3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 HOXD8P13378 290 aaPredicted RBP3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ZNF16P17020 682 aaPredicted RBP3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 PLCB3Q01970 1234 aa3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 SFSWAPQ12872 951 aaKnown RBP3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 CCINQ13939 588 aa3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ENOX2Q16206 610 aaKnown RBP3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 NLRP13Q86W25 1043 aa3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 CMTR1Q8N1G2 835 aaKnown RBP3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 SNX29Q8TEQ0 813 aa3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 FBF1Q8TES7 1133 aa3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 FOXD4L4Q8WXT5 416 aaPredicted RBP3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 BCL2L13Q9BXK5 485 aa3.8□□□□□ -1.8
RNU5F-4P-201ENST00000516581 DCDC2BA2VCK2 349 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 H3BM21 787 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 MAP3K6O95382 1288 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 FGFR3P22607 806 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 VAMP1P23763 118 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 SOX18P35713 384 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 C8orf34Q49A92 452 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 EAPPQ56P03 285 aaPredicted RBP3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 FOXR1Q6PIV2 292 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 SV2AQ7L0J3 742 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 TTC16Q8NEE8 873 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 TMC1Q8TDI8 760 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 GTPBP3Q969Y2 492 aaKnown RBP3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ABHD17AQ96GS6 310 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 TRERF1Q96PN7 1200 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 NIF3L1Q9GZT8 377 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ELP3Q9H9T3 547 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 AVENQ9NQS1 362 aaPredicted RBP3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 STRN4Q9NRL3 753 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ABI2Q9NYB9 513 aaPredicted RBP3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 USP20Q9Y2K6 914 aa3.79□□□□□ -1.8
RNU5F-4P-201ENST00000516581 PRPF40AO75400 957 aaKnown RBP3.78□□□□□ -1.8
RNU5F-4P-201ENST00000516581 VEGFBP49765 207 aa3.78□□□□□ -1.8
RNU5F-4P-201ENST00000516581 SPEM2Q0P670 501 aa3.78□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ZNF326Q5BKZ1 582 aaKnown RBP3.78□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ALG1LQ6GMV1 187 aa3.78□□□□□ -1.8
RNU5F-4P-201ENST00000516581 ZNF438Q7Z4V0 828 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms