RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 CALM2P0DP24 149 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 CALM3P0DP25 149 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 SP4Q02446 784 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 NESP48681 1621 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 FERP16591 822 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 KIF4BQ2VIQ3 1234 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 HEATR3Q7Z4Q2 680 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 USP16Q9Y5T5 823 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 SYCE3A1L190 88 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 NCBP1Q09161 790 aaKnown RBP12.68□□□□□ -0.38
TRIM41-209ENST00000515834 AKNAQ7Z591 1439 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRIM41-209ENST00000515834 FANCIQ9NVI1 1328 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 ANXA1P04083 346 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 AKNAD1Q5T1N1 836 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 GIGYF2Q6Y7W6 1299 aaKnown RBP12.68□□□□□ -0.38
TRIM41-209ENST00000515834 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 UBA7P41226 1012 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 IARSP41252 1262 aaKnown RBP12.68□□□□□ -0.38
TRIM41-209ENST00000515834 NLRP3Q96P20 1036 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 GCOM1H8Y6P7 765 aaPredicted RBP12.68□□□□□ -0.38
TRIM41-209ENST00000515834 MYZAPP0CAP1 466 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 BEGAINQ9BUH8 593 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 ACTN2P35609 894 aa12.67□□□□□ -0.38
TRIM41-209ENST00000515834 METAP2P50579 478 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRIM41-209ENST00000515834 ANO10Q9NW15 660 aa12.67□□□□□ -0.38
TRIM41-209ENST00000515834 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
TRIM41-209ENST00000515834 WASLO00401 505 aaPredicted RBP12.67□□□□□ -0.38
TRIM41-209ENST00000515834 HLTFQ14527 1009 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRIM41-209ENST00000515834 DDB1Q16531 1140 aa12.67□□□□□ -0.38
TRIM41-209ENST00000515834 YEATS4O95619 227 aa12.67□□□□□ -0.38
TRIM41-209ENST00000515834 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
TRIM41-209ENST00000515834 SFPQP23246 707 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRIM41-209ENST00000515834 JAG2Q9Y219 1238 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 GJC1P36383 396 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 TERF1P54274 439 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 ATP2B3Q16720 1220 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 SPECC1Q5M775 1068 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 SLC4A4Q9Y6R1 1079 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 IFIT1BQ5T764 474 aaKnown RBP12.66□□□□□ -0.38
TRIM41-209ENST00000515834 TMCO3Q6UWJ1 677 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 SNRPA1P09661 255 aaKnown RBP12.66□□□□□ -0.38
TRIM41-209ENST00000515834 PAFAH1B1P43034 410 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 FSIP1Q8NA03 581 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 LRRC45Q96CN5 670 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 ERICH3Q5RHP9 1530 aa12.66□□□□□ -0.38
TRIM41-209ENST00000515834 TAOK3Q9H2K8 898 aa12.65□□□□□ -0.38
TRIM41-209ENST00000515834 EXOC1Q9NV70 894 aa12.65□□□□□ -0.38
TRIM41-209ENST00000515834 PPP1R14CQ8TAE6 165 aa12.65□□□□□ -0.38
TRIM41-209ENST00000515834 ERMNQ8TAM6 284 aa12.65□□□□□ -0.38
TRIM41-209ENST00000515834 UBXN4Q92575 508 aa12.65□□□□□ -0.38
TRIM41-209ENST00000515834 MRVI1Q9Y6F6 885 aa12.65□□□□□ -0.38
TRIM41-209ENST00000515834 ZC3H12CQ9C0D7 883 aaKnown RBP12.65□□□□□ -0.38
TRIM41-209ENST00000515834 ERICH4A6NGS2 130 aa12.65□□□□□ -0.38
TRIM41-209ENST00000515834 IFT140Q96RY7 1462 aa12.65□□□□□ -0.38
TRIM41-209ENST00000515834 URI1O94763 535 aaPredicted RBP12.64□□□□□ -0.39
TRIM41-209ENST00000515834 FLIIQ13045 1269 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 DDX23Q9BUQ8 820 aaKnown RBP12.64□□□□□ -0.39
TRIM41-209ENST00000515834 NOD1Q9Y239 953 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
TRIM41-209ENST00000515834 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
TRIM41-209ENST00000515834 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 PPM1EQ8WY54 764 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 TBC1D5Q92609 795 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 FSD2A1L4K1 749 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 EVI5LQ96CN4 794 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 ZSCAN12O43309 604 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 WTAPQ15007 396 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
TRIM41-209ENST00000515834 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 GRPEL1Q9HAV7 217 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
TRIM41-209ENST00000515834 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
TRIM41-209ENST00000515834 IKBKGQ9Y6K9 419 aa12.64□□□□□ -0.39
TRIM41-209ENST00000515834 PI4KAP2A4QPH2 592 aa12.63□□□□□ -0.39
TRIM41-209ENST00000515834 NAA16Q6N069 864 aaPredicted RBP12.63□□□□□ -0.39
TRIM41-209ENST00000515834 PI4KAP1Q8N8J0 262 aa12.63□□□□□ -0.39
TRIM41-209ENST00000515834 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM41-209ENST00000515834 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
TRIM41-209ENST00000515834 SSH1Q8WYL5 1049 aa12.63□□□□□ -0.39
TRIM41-209ENST00000515834 ALS2CR12Q96Q35 445 aa12.63□□□□□ -0.39
TRIM41-209ENST00000515834 ORC3Q9UBD5 711 aaPredicted RBP12.63□□□□□ -0.39
TRIM41-209ENST00000515834 B4DLN1 442 aa12.63□□□□□ -0.39
TRIM41-209ENST00000515834 MRPL12P52815 198 aaKnown RBP12.63□□□□□ -0.39
TRIM41-209ENST00000515834 PROCA1Q8NCQ7 364 aaPredicted RBP12.63□□□□□ -0.39
TRIM41-209ENST00000515834 UQCRHLA0A096LP55 91 aa12.63□□□□□ -0.39
TRIM41-209ENST00000515834 UQCRHP07919 91 aa12.63□□□□□ -0.39
TRIM41-209ENST00000515834 KRT13P13646 458 aa12.63□□□□□ -0.39
TRIM41-209ENST00000515834 TMEM110-MUSTN1A8MSY1 372 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 EP400NLQ6ZTU2 488 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 FAM114A1Q8IWE2 563 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 SIRT1Q96EB6 747 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 SH2B1Q9NRF2 756 aaPredicted RBP12.62□□□□□ -0.39
TRIM41-209ENST00000515834 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 TRIM47Q96LD4 638 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms