RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE2-212ENST00000515533 ZNF526Q8TF50 670 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE2-212ENST00000515533 ADCY9O60503 1353 aa12.15□□□□□ -0.46
CDC42SE2-212ENST00000515533 TJP1Q07157 1748 aa12.14□□□□□ -0.47
CDC42SE2-212ENST00000515533 KDM6AO15550 1401 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE2-212ENST00000515533 CABP4P57796 275 aa12.14□□□□□ -0.47
CDC42SE2-212ENST00000515533 C1orf141Q5JVX7 400 aa12.14□□□□□ -0.47
CDC42SE2-212ENST00000515533 MORC1Q86VD1 984 aa12.14□□□□□ -0.47
CDC42SE2-212ENST00000515533 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
CDC42SE2-212ENST00000515533 MTHFSP49914 203 aa12.13□□□□□ -0.47
CDC42SE2-212ENST00000515533 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
CDC42SE2-212ENST00000515533 PXDNLA1KZ92 1463 aa12.13□□□□□ -0.47
CDC42SE2-212ENST00000515533 CNTNAP4Q9C0A0 1308 aa12.12□□□□□ -0.47
CDC42SE2-212ENST00000515533 RFC4P35249 363 aa12.12□□□□□ -0.47
CDC42SE2-212ENST00000515533 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
CDC42SE2-212ENST00000515533 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
CDC42SE2-212ENST00000515533 KNSTRNQ9Y448 316 aa12.12□□□□□ -0.47
CDC42SE2-212ENST00000515533 SBF1O95248 1867 aa12.11□□□□□ -0.47
CDC42SE2-212ENST00000515533 TGFB2P61812 414 aa12.11□□□□□ -0.47
CDC42SE2-212ENST00000515533 SULT6B1Q6IMI4 303 aa12.11□□□□□ -0.47
CDC42SE2-212ENST00000515533 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
CDC42SE2-212ENST00000515533 AEBP1Q8IUX7 1158 aa12.11□□□□□ -0.47
CDC42SE2-212ENST00000515533 ARHGEF1Q92888 912 aaKnown RBP12.11□□□□□ -0.47
CDC42SE2-212ENST00000515533 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
CDC42SE2-212ENST00000515533 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
CDC42SE2-212ENST00000515533 C10orf71Q711Q0 1435 aa12.11□□□□□ -0.47
CDC42SE2-212ENST00000515533 PTCD1O75127 700 aaKnown RBP12.1□□□□□ -0.47
CDC42SE2-212ENST00000515533 RPS6KA4O75676 772 aa12.1□□□□□ -0.47
CDC42SE2-212ENST00000515533 NBR1Q14596 966 aa12.1□□□□□ -0.47
CDC42SE2-212ENST00000515533 LAPTM4AQ15012 233 aa12.1□□□□□ -0.47
CDC42SE2-212ENST00000515533 TSR1Q2NL82 804 aaKnown RBP12.1□□□□□ -0.47
CDC42SE2-212ENST00000515533 CCER1Q8TC90 406 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE2-212ENST00000515533 BCS1LQ9Y276 419 aa12.1□□□□□ -0.47
CDC42SE2-212ENST00000515533 PARP3Q9Y6F1 533 aa12.1□□□□□ -0.47
CDC42SE2-212ENST00000515533 CCDC88AQ3V6T2 1871 aa12.1□□□□□ -0.47
CDC42SE2-212ENST00000515533 A0A0G2JLW4 131 aa12.09□□□□□ -0.47
CDC42SE2-212ENST00000515533 GYS1P13807 737 aa12.09□□□□□ -0.47
CDC42SE2-212ENST00000515533 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
CDC42SE2-212ENST00000515533 MAP3K7O43318 606 aa12.08□□□□□ -0.48
CDC42SE2-212ENST00000515533 PPP4CP60510 307 aa12.08□□□□□ -0.48
CDC42SE2-212ENST00000515533 ADAMTS7Q9UKP4 1686 aa12.07□□□□□ -0.48
CDC42SE2-212ENST00000515533 FCHSD2O94868 740 aa12.07□□□□□ -0.48
CDC42SE2-212ENST00000515533 HSPA6P17066 643 aa12.07□□□□□ -0.48
CDC42SE2-212ENST00000515533 CRKLP46109 303 aaKnown RBP12.07□□□□□ -0.48
CDC42SE2-212ENST00000515533 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
CDC42SE2-212ENST00000515533 DLEC1Q9Y238 1755 aa12.06□□□□□ -0.48
CDC42SE2-212ENST00000515533 DPEP1P16444 411 aa12.06□□□□□ -0.48
CDC42SE2-212ENST00000515533 IL13P35225 146 aa12.06□□□□□ -0.48
CDC42SE2-212ENST00000515533 PDIA6Q15084 440 aa12.06□□□□□ -0.48
CDC42SE2-212ENST00000515533 AKAP4Q5JQC9 854 aa12.06□□□□□ -0.48
CDC42SE2-212ENST00000515533 ARHGAP27Q6ZUM4 889 aa12.06□□□□□ -0.48
CDC42SE2-212ENST00000515533 USP42Q9H9J4 1324 aaKnown RBP12.06□□□□□ -0.48
CDC42SE2-212ENST00000515533 TJAP1Q5JTD0 557 aa12.05□□□□□ -0.48
CDC42SE2-212ENST00000515533 MRC1P22897 1456 aa12.05□□□□□ -0.48
CDC42SE2-212ENST00000515533 GFRA3O60609 400 aa12.04□□□□□ -0.48
CDC42SE2-212ENST00000515533 ZPR1O75312 459 aa12.04□□□□□ -0.48
CDC42SE2-212ENST00000515533 SLC52A2Q9HAB3 445 aa12.04□□□□□ -0.48
CDC42SE2-212ENST00000515533 PIM2Q9P1W9 311 aa12.04□□□□□ -0.48
CDC42SE2-212ENST00000515533 SRP68Q9UHB9 627 aaKnown RBP12.04□□□□□ -0.48
CDC42SE2-212ENST00000515533 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
CDC42SE2-212ENST00000515533 TNRC6CQ9HCJ0 1690 aaKnown RBP12.03□□□□□ -0.48
CDC42SE2-212ENST00000515533 SIPA1L3O60292 1781 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE2-212ENST00000515533 SMAPO00193 183 aa12.03□□□□□ -0.48
CDC42SE2-212ENST00000515533 HMOX1P09601 288 aa12.03□□□□□ -0.48
CDC42SE2-212ENST00000515533 SAMD7Q7Z3H4 446 aa12.03□□□□□ -0.48
CDC42SE2-212ENST00000515533 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
CDC42SE2-212ENST00000515533 KIF7Q2M1P5 1343 aa12.03□□□□□ -0.48
CDC42SE2-212ENST00000515533 WDR90Q96KV7 1748 aa12.03□□□□□ -0.48
CDC42SE2-212ENST00000515533 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
CDC42SE2-212ENST00000515533 KCPQ6ZWJ8 1503 aa12.02□□□□□ -0.48
CDC42SE2-212ENST00000515533 DDR1Q08345 913 aa12.02□□□□□ -0.49
CDC42SE2-212ENST00000515533 DALRD3Q5D0E6 543 aaKnown RBP12.02□□□□□ -0.49
CDC42SE2-212ENST00000515533 DNAJC10Q8IXB1 793 aa12.02□□□□□ -0.49
CDC42SE2-212ENST00000515533 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
CDC42SE2-212ENST00000515533 RNMTO43148 476 aaKnown RBP12.01□□□□□ -0.49
CDC42SE2-212ENST00000515533 TOMM70O94826 608 aa12.01□□□□□ -0.49
CDC42SE2-212ENST00000515533 KCNA3P22001 575 aa12.01□□□□□ -0.49
CDC42SE2-212ENST00000515533 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
CDC42SE2-212ENST00000515533 INTS5Q6P9B9 1019 aaKnown RBP12.01□□□□□ -0.49
CDC42SE2-212ENST00000515533 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
CDC42SE2-212ENST00000515533 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
CDC42SE2-212ENST00000515533 COL15A1P39059 1388 aa12.01□□□□□ -0.49
CDC42SE2-212ENST00000515533 TIAM2Q8IVF5 1701 aa12□□□□□ -0.49
CDC42SE2-212ENST00000515533 DICER1Q9UPY3 1922 aaKnown RBP12□□□□□ -0.49
CDC42SE2-212ENST00000515533 POLRMTO00411 1230 aaKnown RBP12□□□□□ -0.49
CDC42SE2-212ENST00000515533 DIAPH1O60610 1272 aaKnown RBP12□□□□□ -0.49
CDC42SE2-212ENST00000515533 PRSS12P56730 875 aa12□□□□□ -0.49
CDC42SE2-212ENST00000515533 SLC39A6Q13433 755 aa12□□□□□ -0.49
CDC42SE2-212ENST00000515533 C9orf131Q5VYM1 1079 aa12□□□□□ -0.49
CDC42SE2-212ENST00000515533 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
CDC42SE2-212ENST00000515533 C16orf71Q8IYS4 520 aaPredicted RBP12□□□□□ -0.49
CDC42SE2-212ENST00000515533 PRKD2Q9BZL6 878 aa12□□□□□ -0.49
CDC42SE2-212ENST00000515533 SOS1Q07889 1333 aaPredicted RBP12□□□□□ -0.49
CDC42SE2-212ENST00000515533 PCNTO95613 3336 aa11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 SPDYE16A6NNV3 312 aaPredicted RBP11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 CYP19A1P11511 503 aaPredicted RBP11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 CHRNA5P30532 468 aa11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 APLP1P51693 650 aa11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 MTHFSDQ2M296 383 aaKnown RBP11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms