RNA–Protein interactions for RNA: ENST00000515129.5

SEMA6A-215, Transcript of semaphorin 6A, human

TSL 2

Gene SEMA6A, Length 2,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA6A-215	ENST00000515129	HOXB7	P09629	217 aa		13.42	□□□□□ -0.26
SEMA6A-215	ENST00000515129	TEF	Q10587	303 aa		13.42	□□□□□ -0.26
SEMA6A-215	ENST00000515129	TTC22	Q5TAA0	569 aa		13.42	□□□□□ -0.26
SEMA6A-215	ENST00000515129	NLGN1	Q8N2Q7	840 aa		13.42	□□□□□ -0.26
SEMA6A-215	ENST00000515129	USP42	Q9H9J4	1324 aa	Known RBP	13.41	□□□□□ -0.26
SEMA6A-215	ENST00000515129		F6X3S4	739 aa		13.41	□□□□□ -0.26
SEMA6A-215	ENST00000515129	VSIG10	Q8N0Z9	540 aa		13.41	□□□□□ -0.26
SEMA6A-215	ENST00000515129	CHMP5	Q9NZZ3	219 aa		13.41	□□□□□ -0.26
SEMA6A-215	ENST00000515129	HDGFL1	Q5TGJ6	251 aa		13.4	□□□□□ -0.26
SEMA6A-215	ENST00000515129	DDR1	Q08345	913 aa		13.4	□□□□□ -0.26
SEMA6A-215	ENST00000515129	TTC5	Q8N0Z6	440 aa		13.39	□□□□□ -0.27
SEMA6A-215	ENST00000515129	HEG1	Q9ULI3	1381 aa		13.39	□□□□□ -0.27
SEMA6A-215	ENST00000515129	KIAA1551	Q9HCM1	1747 aa		13.39	□□□□□ -0.27
SEMA6A-215	ENST00000515129	CHD4	Q14839	1912 aa		13.39	□□□□□ -0.27
SEMA6A-215	ENST00000515129	USPL1	Q5W0Q7	1092 aa		13.39	□□□□□ -0.27
SEMA6A-215	ENST00000515129	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.39	□□□□□ -0.27
SEMA6A-215	ENST00000515129	BCL2L12	Q9HB09	334 aa		13.39	□□□□□ -0.27
SEMA6A-215	ENST00000515129	PRAMEF22	A3QJZ6	481 aa		13.38	□□□□□ -0.27
SEMA6A-215	ENST00000515129	BTBD11	A6QL63	1104 aa		13.38	□□□□□ -0.27
SEMA6A-215	ENST00000515129	GSPT1	P15170	499 aa	Known RBP	13.38	□□□□□ -0.27
SEMA6A-215	ENST00000515129	TM4SF1	P30408	202 aa		13.38	□□□□□ -0.27
SEMA6A-215	ENST00000515129	HOMEZ	Q8IX15	550 aa		13.38	□□□□□ -0.27
SEMA6A-215	ENST00000515129	KIF13B	Q9NQT8	1826 aa		13.38	□□□□□ -0.27
SEMA6A-215	ENST00000515129	PXDNL	A1KZ92	1463 aa		13.38	□□□□□ -0.27
SEMA6A-215	ENST00000515129	EIF4A1	P60842	406 aa	Known RBP	13.37	□□□□□ -0.27
SEMA6A-215	ENST00000515129	C10orf71	Q711Q0	1435 aa		13.37	□□□□□ -0.27
SEMA6A-215	ENST00000515129	COL15A1	P39059	1388 aa		13.37	□□□□□ -0.27
SEMA6A-215	ENST00000515129		A0A0G2JLW4	131 aa		13.37	□□□□□ -0.27
SEMA6A-215	ENST00000515129	APBB1	O00213	710 aa		13.37	□□□□□ -0.27
SEMA6A-215	ENST00000515129	EIF2S2	P20042	333 aa	Known RBP	13.37	□□□□□ -0.27
SEMA6A-215	ENST00000515129	EIF5	P55010	431 aa	Known RBP	13.37	□□□□□ -0.27
SEMA6A-215	ENST00000515129	ATP8B2	P98198	1209 aa		13.37	□□□□□ -0.27
SEMA6A-215	ENST00000515129	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.37	□□□□□ -0.27
SEMA6A-215	ENST00000515129	A1BG	P04217	495 aa		13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	UBTFL1	P0CB47	393 aa	Predicted RBP	13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	OSBPL3	Q9H4L5	887 aa		13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	NARF	Q9UHQ1	456 aa		13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	POLRMT	O00411	1230 aa	Known RBP	13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	ANXA1	P04083	346 aa		13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	SPRYD3	Q8NCJ5	442 aa		13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	FMNL2	Q96PY5	1086 aa		13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	LRRCC1	Q9C099	1032 aa		13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	USP16	Q9Y5T5	823 aa		13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	PARP3	Q9Y6F1	533 aa		13.36	□□□□□ -0.27
SEMA6A-215	ENST00000515129	SMARCA5	O60264	1052 aa	Predicted RBP	13.35	□□□□□ -0.27
SEMA6A-215	ENST00000515129	GRIN3B	O60391	1043 aa		13.35	□□□□□ -0.27
SEMA6A-215	ENST00000515129	REC8	O95072	547 aa		13.35	□□□□□ -0.27
SEMA6A-215	ENST00000515129	STARD3NL	O95772	234 aa		13.35	□□□□□ -0.27
SEMA6A-215	ENST00000515129	HSP90AA1	P07900	732 aa	Known RBP	13.35	□□□□□ -0.27
SEMA6A-215	ENST00000515129	DPEP1	P16444	411 aa		13.35	□□□□□ -0.27
SEMA6A-215	ENST00000515129	KCNA3	P22001	575 aa		13.35	□□□□□ -0.27
SEMA6A-215	ENST00000515129	PHAX	Q9H814	394 aa	Known RBP	13.35	□□□□□ -0.27
SEMA6A-215	ENST00000515129	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.35	□□□□□ -0.27
SEMA6A-215	ENST00000515129	ZPR1	O75312	459 aa		13.34	□□□□□ -0.27
SEMA6A-215	ENST00000515129	SDS	P20132	328 aa		13.34	□□□□□ -0.27
SEMA6A-215	ENST00000515129	PIP4K2A	P48426	406 aa	Predicted RBP	13.34	□□□□□ -0.27
SEMA6A-215	ENST00000515129	NFIX	Q14938	502 aa		13.34	□□□□□ -0.27
SEMA6A-215	ENST00000515129	SRCIN1	Q9C0H9	1055 aa		13.34	□□□□□ -0.27
SEMA6A-215	ENST00000515129	RABEP1	Q15276	862 aa		13.34	□□□□□ -0.27
SEMA6A-215	ENST00000515129	PDE1A	P54750	535 aa		13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129	TGFB2	P61812	414 aa		13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129	HDAC5	Q9UQL6	1122 aa		13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129		K7ELQ4	463 aa	Predicted RBP	13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129	KIF2C	Q99661	725 aa		13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129	USP44	Q9H0E7	712 aa		13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129	TBC1D2B	Q9UPU7	963 aa		13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129	LRRFIP2	Q9Y608	721 aa	Known RBP	13.33	□□□□□ -0.28
SEMA6A-215	ENST00000515129	DBF4	Q9UBU7	674 aa	Predicted RBP	13.32	□□□□□ -0.28
SEMA6A-215	ENST00000515129	EXOC6B	Q9Y2D4	811 aa		13.32	□□□□□ -0.28
SEMA6A-215	ENST00000515129	RAB11FIP3	O75154	756 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	MCM4	P33991	863 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	USP26	Q9BXU7	913 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	CHPF2	Q9P2E5	772 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	CACNA1F	O60840	1977 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	KDM3B	Q7LBC6	1761 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	NBPF26	B4DH59	902 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	ERC2	O15083	957 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	CHRNA5	P30532	468 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	IL6ST	P40189	918 aa	Predicted RBP	13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	NBPF10	Q6P3W6	841 aa	Known RBP	13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	NBPF15	Q8N660	670 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	DNAAF4	Q8WXU2	420 aa		13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.31	□□□□□ -0.28
SEMA6A-215	ENST00000515129	AFDN	P55196	1824 aa	Known RBP	13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	PNMA6E	A0A0J9YXQ4	647 aa		13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	DDX11L8	A8MPP1	907 aa		13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	SNRPA1	P09661	255 aa	Known RBP	13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	MX1	P20591	662 aa		13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	PROSER3	Q2NL68	480 aa		13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	TBC1D9B	Q66K14	1250 aa		13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	BRCA1	P38398	1863 aa	Known RBP	13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	GIGYF1	O75420	1035 aa	Predicted RBP	13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	CAMTA2	O94983	1202 aa		13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	HSP90AB4P	Q58FF6	505 aa		13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	BICDL1	Q6ZP65	573 aa		13.3	□□□□□ -0.28
SEMA6A-215	ENST00000515129	SSH3	Q8TE77	659 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms