RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 UBN2Q6ZU65 1347 aa30.27■■■□□ 2.44
SMAD1-214ENST00000514831 HOXA10P31260 410 aaPredicted RBP30.27■■■□□ 2.44
SMAD1-214ENST00000514831 VEGFBP49765 207 aa30.27■■■□□ 2.44
SMAD1-214ENST00000514831 TTLL7Q6ZT98 887 aa30.27■■■□□ 2.44
SMAD1-214ENST00000514831 RPGRQ92834 1020 aaKnown RBP30.26■■■□□ 2.43
SMAD1-214ENST00000514831 PLEKHF1Q96S99 279 aa30.25■■■□□ 2.43
SMAD1-214ENST00000514831 PRDM10Q9NQV6 1147 aa30.25■■■□□ 2.43
SMAD1-214ENST00000514831 RRP7AQ9Y3A4 280 aaKnown RBP30.25■■■□□ 2.43
SMAD1-214ENST00000514831 GRIPAP1Q4V328 841 aa30.24■■■□□ 2.43
SMAD1-214ENST00000514831 CNTROBQ8N137 903 aa30.24■■■□□ 2.43
SMAD1-214ENST00000514831 GPTP24298 496 aa30.23■■■□□ 2.43
SMAD1-214ENST00000514831 NFE2L2Q16236 605 aa30.23■■■□□ 2.43
SMAD1-214ENST00000514831 MAP1SQ66K74 1059 aaPredicted RBP30.23■■■□□ 2.43
SMAD1-214ENST00000514831 AIDAQ96BJ3 306 aa30.23■■■□□ 2.43
SMAD1-214ENST00000514831 ZBTB3Q9H5J0 574 aa30.23■■■□□ 2.43
SMAD1-214ENST00000514831 ERBB4Q15303 1308 aa30.22■■■□□ 2.43
SMAD1-214ENST00000514831 RASSF10A6NK89 507 aa30.22■■■□□ 2.43
SMAD1-214ENST00000514831 MYL6BP14649 208 aa30.22■■■□□ 2.43
SMAD1-214ENST00000514831 EIF6P56537 245 aaKnown RBP30.22■■■□□ 2.43
SMAD1-214ENST00000514831 CTCFP49711 727 aaPredicted RBP30.21■■■□□ 2.43
SMAD1-214ENST00000514831 SUSD4Q5VX71 490 aa30.21■■■□□ 2.43
SMAD1-214ENST00000514831 ZNF34Q8IZ26 560 aa30.21■■■□□ 2.43
SMAD1-214ENST00000514831 CRAMP1Q96RY5 1269 aa30.21■■■□□ 2.43
SMAD1-214ENST00000514831 THUMPD2Q9BTF0 503 aaKnown RBP30.21■■■□□ 2.43
SMAD1-214ENST00000514831 THSD7BQ9C0I4 1608 aa30.21■■■□□ 2.43
SMAD1-214ENST00000514831 NTSR2O95665 410 aa30.2■■■□□ 2.43
SMAD1-214ENST00000514831 GIGYF2Q6Y7W6 1299 aaKnown RBP30.19■■■□□ 2.42
SMAD1-214ENST00000514831 RBM17Q96I25 401 aaKnown RBP30.19■■■□□ 2.42
SMAD1-214ENST00000514831 WBP1LQ9NX94 342 aa30.19■■■□□ 2.42
SMAD1-214ENST00000514831 ANKRD36CQ5JPF3 1778 aa30.18■■■□□ 2.42
SMAD1-214ENST00000514831 PPEF1O14829 653 aaPredicted RBP30.18■■■□□ 2.42
SMAD1-214ENST00000514831 LMOD1P29536 600 aaPredicted RBP30.18■■■□□ 2.42
SMAD1-214ENST00000514831 LARGE2Q8N3Y3 721 aa30.18■■■□□ 2.42
SMAD1-214ENST00000514831 GJA3Q9Y6H8 435 aa30.18■■■□□ 2.42
SMAD1-214ENST00000514831 TRPM7Q96QT4 1865 aa30.17■■■□□ 2.42
SMAD1-214ENST00000514831 SCNN1DP51172 638 aa30.17■■■□□ 2.42
SMAD1-214ENST00000514831 DEFB115Q30KQ5 88 aa30.17■■■□□ 2.42
SMAD1-214ENST00000514831 MAPK8IP3Q9UPT6 1336 aa30.16■■■□□ 2.42
SMAD1-214ENST00000514831 LAMB2P55268 1798 aa30.15■■■□□ 2.42
SMAD1-214ENST00000514831 PARP10Q53GL7 1025 aa30.15■■■□□ 2.42
SMAD1-214ENST00000514831 C3orf67Q6ZVT6 689 aa30.15■■■□□ 2.42
SMAD1-214ENST00000514831 PPP1R42Q7Z4L9 355 aa30.15■■■□□ 2.42
SMAD1-214ENST00000514831 SLC51AQ86UW1 340 aa30.15■■■□□ 2.42
SMAD1-214ENST00000514831 PNNQ9H307 717 aaKnown RBP30.15■■■□□ 2.42
SMAD1-214ENST00000514831 DDX21Q9NR30 783 aaKnown RBP eCLIP30.15■■■□□ 2.42
SMAD1-214ENST00000514831 LRP10Q7Z4F1 713 aa30.14■■■□□ 2.42
SMAD1-214ENST00000514831 ABT1Q9ULW3 272 aaKnown RBP30.13■■■□□ 2.41
SMAD1-214ENST00000514831 WDR33Q9C0J8 1336 aaKnown RBP30.13■■■□□ 2.41
SMAD1-214ENST00000514831 EPS15P42566 896 aa30.12■■■□□ 2.41
SMAD1-214ENST00000514831 NIM1KQ8IY84 436 aa30.12■■■□□ 2.41
SMAD1-214ENST00000514831 NLRP3Q96P20 1036 aa30.11■■■□□ 2.41
SMAD1-214ENST00000514831 TSPYL4Q9UJ04 414 aa30.11■■■□□ 2.41
SMAD1-214ENST00000514831 TCERG1O14776 1098 aaKnown RBP30.1■■■□□ 2.41
SMAD1-214ENST00000514831 PPIP5K2O43314 1243 aa30.1■■■□□ 2.41
SMAD1-214ENST00000514831 LBX1P52954 281 aa30.1■■■□□ 2.41
SMAD1-214ENST00000514831 PDIA6Q15084 440 aa30.1■■■□□ 2.41
SMAD1-214ENST00000514831 USP50Q70EL3 339 aaPredicted RBP30.1■■■□□ 2.41
SMAD1-214ENST00000514831 VPS33BQ9H267 617 aa30.1■■■□□ 2.41
SMAD1-214ENST00000514831 MAP2K1Q02750 393 aaPredicted RBP30.09■■■□□ 2.41
SMAD1-214ENST00000514831 SLC10A5Q5PT55 438 aa30.09■■■□□ 2.41
SMAD1-214ENST00000514831 ATP6V0A2Q9Y487 856 aa30.09■■■□□ 2.41
SMAD1-214ENST00000514831 HSPA8P11142 646 aaKnown RBP30.08■■■□□ 2.41
SMAD1-214ENST00000514831 UTP14AQ9BVJ6 771 aaKnown RBP30.08■■■□□ 2.41
SMAD1-214ENST00000514831 TMX4Q9H1E5 349 aaPredicted RBP30.08■■■□□ 2.41
SMAD1-214ENST00000514831 ABCC4O15439 1325 aa30.07■■■□□ 2.4
SMAD1-214ENST00000514831 AOC3Q16853 763 aa30.07■■■□□ 2.4
SMAD1-214ENST00000514831 BABAM1Q9NWV8 329 aa30.06■■■□□ 2.4
SMAD1-214ENST00000514831 FMR1Q06787 632 aaKnown RBP eCLIP30.05■■■□□ 2.4
SMAD1-214ENST00000514831 PROSER3Q2NL68 480 aa30.05■■■□□ 2.4
SMAD1-214ENST00000514831 RTFDC1Q9BY42 306 aaPredicted RBP30.05■■■□□ 2.4
SMAD1-214ENST00000514831 GPRC5DQ9NZD1 345 aa30.05■■■□□ 2.4
SMAD1-214ENST00000514831 EIF2S2P20042 333 aaKnown RBP30.04■■■□□ 2.4
SMAD1-214ENST00000514831 SUPT20HQ8NEM7 779 aa30.04■■■□□ 2.4
SMAD1-214ENST00000514831 ECE1P42892 770 aa30.03■■■□□ 2.4
SMAD1-214ENST00000514831 CAPNS2Q96L46 248 aa30.03■■■□□ 2.4
SMAD1-214ENST00000514831 ADARB2Q9NS39 739 aaKnown RBP30.03■■■□□ 2.4
SMAD1-214ENST00000514831 LRRC37AA6NMS7 1700 aa30.02■■■□□ 2.4
SMAD1-214ENST00000514831 ANXA1P04083 346 aa30.02■■■□□ 2.4
SMAD1-214ENST00000514831 HSP90AB3PQ58FF7 597 aa30.02■■■□□ 2.4
SMAD1-214ENST00000514831 ZNRF3Q9ULT6 936 aa30.02■■■□□ 2.4
SMAD1-214ENST00000514831 TRAF5O00463 557 aa30.01■■■□□ 2.39
SMAD1-214ENST00000514831 RIPK4P57078 832 aa30.01■■■□□ 2.39
SMAD1-214ENST00000514831 CXCL9Q07325 125 aa30.01■■■□□ 2.39
SMAD1-214ENST00000514831 CST9Q5W186 159 aa30.01■■■□□ 2.39
SMAD1-214ENST00000514831 CDHR2Q9BYE9 1310 aa30■■■□□ 2.39
SMAD1-214ENST00000514831 BBOX1O75936 387 aa30■■■□□ 2.39
SMAD1-214ENST00000514831 TLL2Q9Y6L7 1015 aa30■■■□□ 2.39
SMAD1-214ENST00000514831 DUOX1Q9NRD9 1551 aa29.99■■■□□ 2.39
SMAD1-214ENST00000514831 LMOD3Q0VAK6 560 aa29.99■■■□□ 2.39
SMAD1-214ENST00000514831 DPP8Q6V1X1 898 aaPredicted RBP29.99■■■□□ 2.39
SMAD1-214ENST00000514831 PAXIP1Q6ZW49 1069 aaPredicted RBP29.99■■■□□ 2.39
SMAD1-214ENST00000514831 NLRP10Q86W26 655 aa29.99■■■□□ 2.39
SMAD1-214ENST00000514831 SP8Q8IXZ3 490 aa29.99■■■□□ 2.39
SMAD1-214ENST00000514831 TAF1P21675 1872 aa29.98■■■□□ 2.39
SMAD1-214ENST00000514831 KIAA2012Q0VF49 1180 aa29.98■■■□□ 2.39
SMAD1-214ENST00000514831 CYP4F22Q6NT55 531 aa29.98■■■□□ 2.39
SMAD1-214ENST00000514831 DDX60Q8IY21 1712 aaKnown RBP29.98■■■□□ 2.39
SMAD1-214ENST00000514831 COPS6Q7L5N1 327 aa29.97■■■□□ 2.39
SMAD1-214ENST00000514831 HCLS1P14317 486 aaPredicted RBP29.96■■■□□ 2.39
SMAD1-214ENST00000514831 TMPOP42166 694 aaKnown RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms