RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 TCIRG1Q13488 830 aa24.45■■□□□ 1.5
LPCAT1-206ENST00000514484 HSP90AB3PQ58FF7 597 aa24.45■■□□□ 1.5
LPCAT1-206ENST00000514484 NLRP10Q86W26 655 aa24.45■■□□□ 1.5
LPCAT1-206ENST00000514484 PLBD2Q8NHP8 589 aa24.45■■□□□ 1.5
LPCAT1-206ENST00000514484 UTP14AQ9BVJ6 771 aaKnown RBP24.45■■□□□ 1.5
LPCAT1-206ENST00000514484 PHAXQ9H814 394 aaKnown RBP24.45■■□□□ 1.5
LPCAT1-206ENST00000514484 DDX60Q8IY21 1712 aaKnown RBP24.44■■□□□ 1.5
LPCAT1-206ENST00000514484 IL16Q14005 1332 aa24.44■■□□□ 1.5
LPCAT1-206ENST00000514484 LMNB1P20700 586 aa24.44■■□□□ 1.5
LPCAT1-206ENST00000514484 CRY2Q49AN0 593 aa24.44■■□□□ 1.5
LPCAT1-206ENST00000514484 OLFM4Q6UX06 510 aa24.44■■□□□ 1.5
LPCAT1-206ENST00000514484 ANKRD13DQ6ZTN6 518 aa24.44■■□□□ 1.5
LPCAT1-206ENST00000514484 TCERG1O14776 1098 aaKnown RBP24.43■■□□□ 1.5
LPCAT1-206ENST00000514484 C1QTNF8P60827 252 aa24.43■■□□□ 1.5
LPCAT1-206ENST00000514484 SYNE4Q8N205 404 aa24.43■■□□□ 1.5
LPCAT1-206ENST00000514484 TAF1P21675 1872 aa24.43■■□□□ 1.5
LPCAT1-206ENST00000514484 FANCIQ9NVI1 1328 aa24.42■■□□□ 1.5
LPCAT1-206ENST00000514484 NCBP3Q53F19 620 aaKnown RBP24.42■■□□□ 1.5
LPCAT1-206ENST00000514484 RPGRQ92834 1020 aaKnown RBP24.42■■□□□ 1.5
LPCAT1-206ENST00000514484 ATP5J2-PTCD1G3V325 749 aa24.41■■□□□ 1.5
LPCAT1-206ENST00000514484 CCDC30Q5VVM6 783 aa24.41■■□□□ 1.5
LPCAT1-206ENST00000514484 C7orf43Q8WVR3 580 aa24.41■■□□□ 1.5
LPCAT1-206ENST00000514484 TAOK3Q9H2K8 898 aa24.41■■□□□ 1.5
LPCAT1-206ENST00000514484 GOLGA2Q08379 1002 aa24.4■■□□□ 1.5
LPCAT1-206ENST00000514484 TWISTNBQ3B726 338 aaPredicted RBP24.4■■□□□ 1.5
LPCAT1-206ENST00000514484 SLC51AQ86UW1 340 aa24.4■■□□□ 1.5
LPCAT1-206ENST00000514484 NMRK2Q9NPI5 230 aa24.4■■□□□ 1.5
LPCAT1-206ENST00000514484 TRMT112Q9UI30 125 aaKnown RBP24.4■■□□□ 1.5
LPCAT1-206ENST00000514484 HCLS1P14317 486 aaPredicted RBP24.39■■□□□ 1.49
LPCAT1-206ENST00000514484 CCDC93Q567U6 631 aa24.39■■□□□ 1.49
LPCAT1-206ENST00000514484 SOGA3Q5TF21 947 aa24.39■■□□□ 1.49
LPCAT1-206ENST00000514484 CACNA1FO60840 1977 aa24.38■■□□□ 1.49
LPCAT1-206ENST00000514484 KIF3CO14782 793 aa24.38■■□□□ 1.49
LPCAT1-206ENST00000514484 ALDH1B1P30837 517 aa24.38■■□□□ 1.49
LPCAT1-206ENST00000514484 RIC3Q7Z5B4 369 aa24.38■■□□□ 1.49
LPCAT1-206ENST00000514484 WDR63Q8IWG1 891 aa24.38■■□□□ 1.49
LPCAT1-206ENST00000514484 ISCA1Q9BUE6 129 aa24.38■■□□□ 1.49
LPCAT1-206ENST00000514484 SPINK5Q9NQ38 1064 aaPredicted RBP24.38■■□□□ 1.49
LPCAT1-206ENST00000514484 RNF123Q5XPI4 1314 aa24.37■■□□□ 1.49
LPCAT1-206ENST00000514484 LTBP3Q9NS15 1303 aa24.37■■□□□ 1.49
LPCAT1-206ENST00000514484 NLRP3Q96P20 1036 aa24.37■■□□□ 1.49
LPCAT1-206ENST00000514484 SH3TC1Q8TE82 1336 aa24.36■■□□□ 1.49
LPCAT1-206ENST00000514484 HOXA10P31260 410 aaPredicted RBP24.36■■□□□ 1.49
LPCAT1-206ENST00000514484 RTL5Q5HYW3 569 aaPredicted RBP24.35■■□□□ 1.49
LPCAT1-206ENST00000514484 SLC10A5Q5PT55 438 aa24.35■■□□□ 1.49
LPCAT1-206ENST00000514484 RBM17Q96I25 401 aaKnown RBP24.35■■□□□ 1.49
LPCAT1-206ENST00000514484 MYD88Q99836 296 aa24.35■■□□□ 1.49
LPCAT1-206ENST00000514484 FAM89AQ96GI7 184 aa24.34■■□□□ 1.49
LPCAT1-206ENST00000514484 STK31Q9BXU1 1019 aa24.34■■□□□ 1.49
LPCAT1-206ENST00000514484 SNED1Q8TER0 1413 aa24.34■■□□□ 1.49
LPCAT1-206ENST00000514484 KDM2BQ8NHM5 1336 aa24.34■■□□□ 1.49
LPCAT1-206ENST00000514484 ZC3H4Q9UPT8 1303 aaKnown RBP24.34■■□□□ 1.49
LPCAT1-206ENST00000514484 EXOSC9Q06265 439 aaKnown RBP24.33■■□□□ 1.49
LPCAT1-206ENST00000514484 CRAMP1Q96RY5 1269 aa24.33■■□□□ 1.49
LPCAT1-206ENST00000514484 ZNF277Q9NRM2 450 aaPredicted RBP24.33■■□□□ 1.49
LPCAT1-206ENST00000514484 ABCC4O15439 1325 aa24.33■■□□□ 1.48
LPCAT1-206ENST00000514484 PPEF1O14829 653 aaPredicted RBP24.32■■□□□ 1.48
LPCAT1-206ENST00000514484 FKBP4Q02790 459 aaKnown RBP eCLIP24.32■■□□□ 1.48
LPCAT1-206ENST00000514484 G2E3Q7L622 706 aa24.32■■□□□ 1.48
LPCAT1-206ENST00000514484 CHMP4AQ9BY43 222 aa24.31■■□□□ 1.48
LPCAT1-206ENST00000514484 MAP3K2Q9Y2U5 619 aa24.31■■□□□ 1.48
LPCAT1-206ENST00000514484 COL4A1P02462 1669 aa24.3■■□□□ 1.48
LPCAT1-206ENST00000514484 DDX58O95786 925 aaKnown RBP24.3■■□□□ 1.48
LPCAT1-206ENST00000514484 RTKN2Q8IZC4 609 aa24.3■■□□□ 1.48
LPCAT1-206ENST00000514484 RRAGCQ9HB90 399 aa24.3■■□□□ 1.48
LPCAT1-206ENST00000514484 GLTPD2A6NH11 291 aa24.29■■□□□ 1.48
LPCAT1-206ENST00000514484 SLC4A2P04920 1241 aa24.29■■□□□ 1.48
LPCAT1-206ENST00000514484 METTL22Q9BUU2 404 aaPredicted RBP24.29■■□□□ 1.48
LPCAT1-206ENST00000514484 ZNF521Q96K83 1311 aa24.29■■□□□ 1.48
LPCAT1-206ENST00000514484 WDR90Q96KV7 1748 aa24.28■■□□□ 1.48
LPCAT1-206ENST00000514484 PI4KAP2A4QPH2 592 aa24.28■■□□□ 1.48
LPCAT1-206ENST00000514484 TRIM28Q13263 835 aaKnown RBP24.28■■□□□ 1.48
LPCAT1-206ENST00000514484 PI4KAP1Q8N8J0 262 aa24.28■■□□□ 1.48
LPCAT1-206ENST00000514484 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
LPCAT1-206ENST00000514484 MYH3P11055 1940 aa24.27■■□□□ 1.48
LPCAT1-206ENST00000514484 VAMP4O75379 141 aa24.27■■□□□ 1.48
LPCAT1-206ENST00000514484 JARID2Q92833 1246 aaPredicted RBP24.27■■□□□ 1.48
LPCAT1-206ENST00000514484 COL4A5P29400 1685 aa24.27■■□□□ 1.48
LPCAT1-206ENST00000514484 IRS4O14654 1257 aaPredicted RBP24.26■■□□□ 1.47
LPCAT1-206ENST00000514484 KSR2Q6VAB6 950 aa24.26■■□□□ 1.47
LPCAT1-206ENST00000514484 DDX46Q7L014 1031 aaKnown RBP24.26■■□□□ 1.47
LPCAT1-206ENST00000514484 LRRC37AA6NMS7 1700 aa24.26■■□□□ 1.47
LPCAT1-206ENST00000514484 IARSP41252 1262 aaKnown RBP24.25■■□□□ 1.47
LPCAT1-206ENST00000514484 FLIIQ13045 1269 aa24.25■■□□□ 1.47
LPCAT1-206ENST00000514484 ZBTB38Q8NAP3 1195 aaPredicted RBP24.25■■□□□ 1.47
LPCAT1-206ENST00000514484 CCDC191Q8NCU4 936 aa24.25■■□□□ 1.47
LPCAT1-206ENST00000514484 CWC25Q9NXE8 425 aaPredicted RBP24.25■■□□□ 1.47
LPCAT1-206ENST00000514484 CCER2I3L3R5 266 aa24.24■■□□□ 1.47
LPCAT1-206ENST00000514484 CC2D2BQ6DHV5 1058 aa24.24■■□□□ 1.47
LPCAT1-206ENST00000514484 C16orf71Q8IYS4 520 aaPredicted RBP24.24■■□□□ 1.47
LPCAT1-206ENST00000514484 PSMD1Q99460 953 aa24.24■■□□□ 1.47
LPCAT1-206ENST00000514484 TOMM70O94826 608 aa24.23■■□□□ 1.47
LPCAT1-206ENST00000514484 IGKV5-2P06315 115 aa24.23■■□□□ 1.47
LPCAT1-206ENST00000514484 GRAPQ13588 217 aa24.23■■□□□ 1.47
LPCAT1-206ENST00000514484 GRAPLQ8TC17 118 aaPredicted RBP24.23■■□□□ 1.47
LPCAT1-206ENST00000514484 ATP6V0A2Q9Y487 856 aa24.23■■□□□ 1.47
LPCAT1-206ENST00000514484 ZNF541Q9H0D2 1346 aa24.23■■□□□ 1.47
LPCAT1-206ENST00000514484 SPEF2Q9C093 1822 aa24.23■■□□□ 1.47
LPCAT1-206ENST00000514484 DDNO94850 711 aaPredicted RBP24.22■■□□□ 1.47
LPCAT1-206ENST00000514484 FKBP5Q13451 457 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms