RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	HSP90B1	P14625	803 aa	Known RBP	7.61	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	NBPF10	Q6P3W6	841 aa	Known RBP	7.61	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	BICDL1	Q6ZP65	573 aa		7.61	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	MEIOB	Q8N635	442 aa		7.61	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	SNX29	Q8TEQ0	813 aa		7.61	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	NLRP2	Q9NX02	1062 aa		7.61	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	PRKAG2	Q9UGJ0	569 aa		7.61	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	GIPC1	O14908	333 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	TNFRSF21	O75509	655 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	PHKA2	P46019	1235 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	ARSD	P51689	593 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	ZNF438	Q7Z4V0	828 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	CYP4X1	Q8N118	509 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	ZNF280C	Q8ND82	737 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	C7orf43	Q8WVR3	580 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	HSH2D	Q96JZ2	352 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	INSM2	Q96T92	566 aa	Predicted RBP	7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	TSEN34	Q9BSV6	310 aa	Known RBP	7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	C12orf49	Q9H741	205 aa		7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	POLM	Q9NP87	494 aa	Predicted RBP	7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	DMGDH	Q9UI17	866 aa	Known RBP	7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	FOXD3	Q9UJU5	478 aa	Predicted RBP	7.6	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	SPATA31C2	B4DYI2	1134 aa		7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	ATP2B1	P20020	1258 aa		7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	TNNI2	P48788	182 aa		7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	PDE12	Q6L8Q7	609 aa	Known RBP	7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	XKR5	Q6UX68	686 aa		7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	HS2ST1	Q7LGA3	356 aa		7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	ZNF654	Q8IZM8	581 aa		7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	CMTR1	Q8N1G2	835 aa	Known RBP	7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	CCDC74A	Q96AQ1	378 aa		7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	NEUROD4	Q9HD90	331 aa		7.59	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	SMARCA5	O60264	1052 aa	Predicted RBP	7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	CANX	P27824	592 aa	Known RBP	7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	ZNF394	Q53GI3	561 aa		7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	USPL1	Q5W0Q7	1092 aa		7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	PI16	Q6UXB8	463 aa		7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	USP48	Q86UV5	1035 aa		7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	EPS8L3	Q8TE67	593 aa	Known RBP	7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	SPATA32	Q96LK8	384 aa		7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	DDX41	Q9UJV9	622 aa	Known RBP	7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	INPP5F	Q9Y2H2	1132 aa		7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	USP20	Q9Y2K6	914 aa		7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	RTCB	Q9Y3I0	505 aa	Known RBP	7.58	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	UBAP1L	F5GYI3	381 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	SPINT1	O43278	529 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	PHACTR2	O75167	634 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	UPP2	O95045	317 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	DNAJA1	P31689	397 aa	Known RBP	7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	INPP5B	P32019	993 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	PTPN12	Q05209	780 aa	Known RBP	7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	IFFO2	Q5TF58	517 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	DPH6	Q7L8W6	267 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	BTLA	Q7Z6A9	289 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	KLRG1	Q96E93	195 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	DNAJC2	Q99543	621 aa	Known RBP	7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	OSBPL7	Q9BZF2	842 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	ZFYVE28	Q9HCC9	887 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	FAM8A1	Q9UBU6	413 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	PCDHGB7	Q9Y5F8	929 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	USP31	Q70CQ4	1352 aa		7.57	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.56	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	IRS1	P35568	1242 aa		7.56	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	TAF1C	Q15572	869 aa	Predicted RBP	7.56	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	TRIP4	Q15650	581 aa	Predicted RBP	7.56	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	GML	Q99445	158 aa		7.56	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	SRCIN1	Q9C0H9	1055 aa		7.56	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	ELP3	Q9H9T3	547 aa		7.56	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	GGT7	Q9UJ14	662 aa		7.56	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	EPB42	P16452	691 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	SMPD1	P17405	629 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	ATP4A	P20648	1035 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	CTSO	P43234	321 aa	Predicted RBP	7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	RACK1	P63244	317 aa	Known RBP	7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	ARID5A	Q03989	594 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	POU4F2	Q12837	409 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	LRRC69	Q6ZNQ3	347 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	LINC00528	Q8N1L1	170 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	DHX38	Q92620	1227 aa	Known RBP	7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	ARMC5	Q96C12	935 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	NPHS2	Q9NP85	383 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	TOR4A	Q9NXH8	423 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	KCNMB2	Q9Y691	235 aa		7.55	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	TNFRSF10A	O00220	468 aa		7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	GDF9	O60383	454 aa		7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	GADD45B	O75293	160 aa	Predicted RBP	7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	USP17L7	P0C7H9	530 aa		7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	WDR44	Q5JSH3	913 aa		7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	MEI1	Q5TIA1	1274 aa		7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	PRICKLE2	Q7Z3G6	844 aa		7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	VPS37D	Q86XT2	251 aa		7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	ZIC5	Q96T25	663 aa		7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	TMEM63C	Q9P1W3	806 aa		7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006		V9GY48	417 aa	Predicted RBP	7.54	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	ST13	P50502	369 aa	Known RBP	7.53	□□□□□ -1.2
CALCOCO2-222	ENST00000514006	SRA1	Q9HD15	236 aa	Known RBP	7.53	□□□□□ -1.2
CALCOCO2-222	ENST00000514006		A0A1B0GTH6	734 aa		7.52	□□□□□ -1.21
CALCOCO2-222	ENST00000514006	POLR3D	P05423	398 aa	Predicted RBP	7.52	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms