RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 ORC1Q13415 861 aa6.43□□□□□ -1.38
GYPB-214ENST00000513557 TMC4Q7Z404 712 aa6.43□□□□□ -1.38
GYPB-214ENST00000513557 BTLAQ7Z6A9 289 aa6.43□□□□□ -1.38
GYPB-214ENST00000513557 FAM161BQ96MY7 647 aa6.43□□□□□ -1.38
GYPB-214ENST00000513557 CSRNP1Q96S65 589 aa6.43□□□□□ -1.38
GYPB-214ENST00000513557 SETDB2Q96T68 719 aa6.43□□□□□ -1.38
GYPB-214ENST00000513557 BACH2Q9BYV9 841 aa6.43□□□□□ -1.38
GYPB-214ENST00000513557 FNDC3AQ9Y2H6 1198 aaKnown RBP6.43□□□□□ -1.38
GYPB-214ENST00000513557 RTCBQ9Y3I0 505 aaKnown RBP6.43□□□□□ -1.38
GYPB-214ENST00000513557 GJA3Q9Y6H8 435 aa6.43□□□□□ -1.38
GYPB-214ENST00000513557 A0A1W2PNR3 127 aa6.42□□□□□ -1.38
GYPB-214ENST00000513557 EIF1AYO14602 144 aaKnown RBP6.42□□□□□ -1.38
GYPB-214ENST00000513557 SORBS3O60504 671 aa6.42□□□□□ -1.38
GYPB-214ENST00000513557 RGS20O76081 388 aa6.42□□□□□ -1.38
GYPB-214ENST00000513557 INPP5BP32019 993 aa6.42□□□□□ -1.38
GYPB-214ENST00000513557 FBF1Q8TES7 1133 aa6.42□□□□□ -1.38
GYPB-214ENST00000513557 DNAJC25Q9H1X3 360 aa6.42□□□□□ -1.38
GYPB-214ENST00000513557 SOS2Q07890 1332 aaPredicted RBP6.42□□□□□ -1.38
GYPB-214ENST00000513557 EPB42P16452 691 aa6.41□□□□□ -1.38
GYPB-214ENST00000513557 DAB2P98082 770 aa6.41□□□□□ -1.38
GYPB-214ENST00000513557 CTC1Q2NKJ3 1217 aa6.41□□□□□ -1.38
GYPB-214ENST00000513557 CMTR1Q8N1G2 835 aaKnown RBP6.41□□□□□ -1.38
GYPB-214ENST00000513557 GPAMQ9HCL2 828 aa6.41□□□□□ -1.38
GYPB-214ENST00000513557 RNF19AQ9NV58 838 aa6.41□□□□□ -1.38
GYPB-214ENST00000513557 VTI1BQ9UEU0 232 aa6.41□□□□□ -1.38
GYPB-214ENST00000513557 USP20Q9Y2K6 914 aa6.41□□□□□ -1.38
GYPB-214ENST00000513557 UBAP1LF5GYI3 381 aa6.4□□□□□ -1.38
GYPB-214ENST00000513557 SCAMP3O14828 347 aaKnown RBP6.4□□□□□ -1.38
GYPB-214ENST00000513557 CPNE3O75131 537 aaKnown RBP6.4□□□□□ -1.38
GYPB-214ENST00000513557 GNA15P30679 374 aa6.4□□□□□ -1.38
GYPB-214ENST00000513557 PDE12Q6L8Q7 609 aaKnown RBP6.4□□□□□ -1.38
GYPB-214ENST00000513557 TRIM46Q7Z4K8 759 aa6.4□□□□□ -1.38
GYPB-214ENST00000513557 ZNF438Q7Z4V0 828 aa6.4□□□□□ -1.38
GYPB-214ENST00000513557 PGBD3Q8N328 593 aa6.4□□□□□ -1.38
GYPB-214ENST00000513557 CEP63Q96MT8 703 aa6.4□□□□□ -1.38
GYPB-214ENST00000513557 IGSF3O75054 1194 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 TNFRSF21O75509 655 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 F11P03951 625 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 SMCPP49901 116 aaPredicted RBP6.39□□□□□ -1.39
GYPB-214ENST00000513557 TYRO3Q06418 890 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 TRIP4Q15650 581 aaPredicted RBP6.39□□□□□ -1.39
GYPB-214ENST00000513557 PKDCCQ504Y2 493 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 XKR5Q6UX68 686 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 SNX29Q8TEQ0 813 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 ZFP42Q96MM3 310 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 CFHR5Q9BXR6 569 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 CRISPLD1Q9H336 500 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 RUBCNLQ9H714 662 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 DYRK1BQ9Y463 629 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 KCNMB2Q9Y691 235 aa6.39□□□□□ -1.39
GYPB-214ENST00000513557 AXIN1O15169 862 aa6.38□□□□□ -1.39
GYPB-214ENST00000513557 DGAT1O75907 488 aa6.38□□□□□ -1.39
GYPB-214ENST00000513557 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.38□□□□□ -1.39
GYPB-214ENST00000513557 NLRP8Q86W28 1048 aa6.38□□□□□ -1.39
GYPB-214ENST00000513557 TMEM87AQ8NBN3 555 aa6.38□□□□□ -1.39
GYPB-214ENST00000513557 FRMD6Q96NE9 622 aa6.38□□□□□ -1.39
GYPB-214ENST00000513557 GAS2L1Q99501 681 aaPredicted RBP6.38□□□□□ -1.39
GYPB-214ENST00000513557 ELP3Q9H9T3 547 aa6.38□□□□□ -1.39
GYPB-214ENST00000513557 FOXD3Q9UJU5 478 aaPredicted RBP6.38□□□□□ -1.39
GYPB-214ENST00000513557 DNMT3LQ9UJW3 386 aa6.38□□□□□ -1.39
GYPB-214ENST00000513557 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
GYPB-214ENST00000513557 MAN1A2O60476 641 aa6.37□□□□□ -1.39
GYPB-214ENST00000513557 PHACTR2O75167 634 aa6.37□□□□□ -1.39
GYPB-214ENST00000513557 XYLBO75191 536 aa6.37□□□□□ -1.39
GYPB-214ENST00000513557 EFHC2Q5JST6 749 aa6.37□□□□□ -1.39
GYPB-214ENST00000513557 LDLRAD1Q5T700 205 aa6.37□□□□□ -1.39
GYPB-214ENST00000513557 SAMD5Q5TGI4 173 aa6.37□□□□□ -1.39
GYPB-214ENST00000513557 BRD7Q9NPI1 651 aa6.37□□□□□ -1.39
GYPB-214ENST00000513557 USP35Q9P2H5 1018 aa6.37□□□□□ -1.39
GYPB-214ENST00000513557 ERCC5P28715 1186 aaPredicted RBP6.36□□□□□ -1.39
GYPB-214ENST00000513557 GRNP28799 593 aaKnown RBP6.36□□□□□ -1.39
GYPB-214ENST00000513557 HDLBPQ00341 1268 aaKnown RBP6.36□□□□□ -1.39
GYPB-214ENST00000513557 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.36□□□□□ -1.39
GYPB-214ENST00000513557 USPL1Q5W0Q7 1092 aa6.36□□□□□ -1.39
GYPB-214ENST00000513557 CCDC74AQ96AQ1 378 aa6.36□□□□□ -1.39
GYPB-214ENST00000513557 ZFYVE28Q9HCC9 887 aa6.36□□□□□ -1.39
GYPB-214ENST00000513557 NLRP2Q9NX02 1062 aa6.36□□□□□ -1.39
GYPB-214ENST00000513557 TMEM63CQ9P1W3 806 aa6.36□□□□□ -1.39
GYPB-214ENST00000513557 AK5Q9Y6K8 562 aa6.36□□□□□ -1.39
GYPB-214ENST00000513557 GFRA3O60609 400 aa6.35□□□□□ -1.39
GYPB-214ENST00000513557 EGFRP00533 1210 aa6.35□□□□□ -1.39
GYPB-214ENST00000513557 EIF4BP23588 611 aaKnown RBP6.35□□□□□ -1.39
GYPB-214ENST00000513557 ZC3H6P61129 1189 aaKnown RBP6.35□□□□□ -1.39
GYPB-214ENST00000513557 C9orf131Q5VYM1 1079 aa6.35□□□□□ -1.39
GYPB-214ENST00000513557 CRIPAKQ8N1N5 446 aa6.35□□□□□ -1.39
GYPB-214ENST00000513557 CRELD1Q96HD1 420 aa6.35□□□□□ -1.39
GYPB-214ENST00000513557 C8orf37Q96NL8 207 aa6.35□□□□□ -1.39
GYPB-214ENST00000513557 C11orf16Q9NQ32 467 aa6.35□□□□□ -1.39
GYPB-214ENST00000513557 METTL5Q9NRN9 209 aaKnown RBP6.35□□□□□ -1.39
GYPB-214ENST00000513557 SENP3-EIF4A1A0A087X0R7 540 aa6.34□□□□□ -1.39
GYPB-214ENST00000513557 GIPC1O14908 333 aa6.34□□□□□ -1.39
GYPB-214ENST00000513557 ZNF76P36508 570 aa6.34□□□□□ -1.39
GYPB-214ENST00000513557 LBRQ14739 615 aaKnown RBP6.34□□□□□ -1.39
GYPB-214ENST00000513557 TTC39BQ5VTQ0 682 aaPredicted RBP6.34□□□□□ -1.39
GYPB-214ENST00000513557 FIGNL1Q6PIW4 674 aa6.34□□□□□ -1.39
GYPB-214ENST00000513557 RIPOR1Q6ZS17 1223 aa6.34□□□□□ -1.39
GYPB-214ENST00000513557 NLRP13Q86W25 1043 aa6.34□□□□□ -1.39
GYPB-214ENST00000513557 EPS8L3Q8TE67 593 aaKnown RBP6.34□□□□□ -1.39
GYPB-214ENST00000513557 ZCCHC2Q9C0B9 1178 aaKnown RBP6.34□□□□□ -1.39
GYPB-214ENST00000513557 ABI2Q9NYB9 513 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms