RNA–Protein interactions for RNA: ENST00000513436.6

SERF1A-209, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 3 BASIC

Gene SERF1A, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-209ENST00000513436 XAGE3Q8WTP9 111 aa15.83■□□□□ 0.13
SERF1A-209ENST00000513436 RBM17Q96I25 401 aaKnown RBP15.83■□□□□ 0.13
SERF1A-209ENST00000513436 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.13
SERF1A-209ENST00000513436 ANP32CO43423 234 aa15.83■□□□□ 0.12
SERF1A-209ENST00000513436 KRT24Q2M2I5 525 aa15.83■□□□□ 0.12
SERF1A-209ENST00000513436 NLRP3Q96P20 1036 aa15.83■□□□□ 0.12
SERF1A-209ENST00000513436 UTP14AQ9BVJ6 771 aaKnown RBP15.83■□□□□ 0.12
SERF1A-209ENST00000513436 TMX4Q9H1E5 349 aaPredicted RBP15.83■□□□□ 0.12
SERF1A-209ENST00000513436 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
SERF1A-209ENST00000513436 UBN2Q6ZU65 1347 aa15.82■□□□□ 0.12
SERF1A-209ENST00000513436 FKBP4Q02790 459 aaKnown RBP eCLIP15.82■□□□□ 0.12
SERF1A-209ENST00000513436 SMC1BQ8NDV3 1235 aa15.82■□□□□ 0.12
SERF1A-209ENST00000513436 C7orf43Q8WVR3 580 aa15.82■□□□□ 0.12
SERF1A-209ENST00000513436 SBF1O95248 1867 aa15.81■□□□□ 0.12
SERF1A-209ENST00000513436 HOXB7P09629 217 aa15.81■□□□□ 0.12
SERF1A-209ENST00000513436 GNAI1P63096 354 aa15.81■□□□□ 0.12
SERF1A-209ENST00000513436 CHPF2Q9P2E5 772 aa15.81■□□□□ 0.12
SERF1A-209ENST00000513436 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
SERF1A-209ENST00000513436 NTSR2O95665 410 aa15.8■□□□□ 0.12
SERF1A-209ENST00000513436 CRY2Q49AN0 593 aa15.8■□□□□ 0.12
SERF1A-209ENST00000513436 DUSP27Q5VZP5 1158 aa15.8■□□□□ 0.12
SERF1A-209ENST00000513436 LRP10Q7Z4F1 713 aa15.8■□□□□ 0.12
SERF1A-209ENST00000513436 ZNF277Q9NRM2 450 aaPredicted RBP15.8■□□□□ 0.12
SERF1A-209ENST00000513436 DBF4Q9UBU7 674 aaPredicted RBP15.8■□□□□ 0.12
SERF1A-209ENST00000513436 ABCC12Q96J65 1359 aa15.8■□□□□ 0.12
SERF1A-209ENST00000513436 IBTKQ9P2D0 1353 aaPredicted RBP15.8■□□□□ 0.12
SERF1A-209ENST00000513436 TCERG1O14776 1098 aaKnown RBP15.79■□□□□ 0.12
SERF1A-209ENST00000513436 CC2D2BQ6DHV5 1058 aa15.79■□□□□ 0.12
SERF1A-209ENST00000513436 OLFM4Q6UX06 510 aa15.79■□□□□ 0.12
SERF1A-209ENST00000513436 SYNE4Q8N205 404 aa15.79■□□□□ 0.12
SERF1A-209ENST00000513436 MBIPQ9NS73 344 aa15.79■□□□□ 0.12
SERF1A-209ENST00000513436 TRMT112Q9UI30 125 aaKnown RBP15.79■□□□□ 0.12
SERF1A-209ENST00000513436 SLX4Q8IY92 1834 aa15.79■□□□□ 0.12
SERF1A-209ENST00000513436 TCIRG1Q13488 830 aa15.79■□□□□ 0.12
SERF1A-209ENST00000513436 IFT57Q9NWB7 429 aa15.79■□□□□ 0.12
SERF1A-209ENST00000513436 DDNO94850 711 aaPredicted RBP15.78■□□□□ 0.12
SERF1A-209ENST00000513436 ANKRD13DQ6ZTN6 518 aa15.78■□□□□ 0.12
SERF1A-209ENST00000513436 CRAMP1Q96RY5 1269 aa15.78■□□□□ 0.12
SERF1A-209ENST00000513436 HYPKQ9NX55 129 aa15.78■□□□□ 0.12
SERF1A-209ENST00000513436 CEP350Q5VT06 3117 aa15.78■□□□□ 0.12
SERF1A-209ENST00000513436 ELL2O00472 640 aaPredicted RBP15.77■□□□□ 0.12
SERF1A-209ENST00000513436 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
SERF1A-209ENST00000513436 GRIPAP1Q4V328 841 aa15.77■□□□□ 0.12
SERF1A-209ENST00000513436 NLRP10Q86W26 655 aa15.77■□□□□ 0.12
SERF1A-209ENST00000513436 JDP2Q8WYK2 163 aa15.77■□□□□ 0.12
SERF1A-209ENST00000513436 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
SERF1A-209ENST00000513436 NUP98P52948 1817 aa15.77■□□□□ 0.11
SERF1A-209ENST00000513436 PPEF1O14829 653 aaPredicted RBP15.76■□□□□ 0.11
SERF1A-209ENST00000513436 IARSP41252 1262 aaKnown RBP15.76■□□□□ 0.11
SERF1A-209ENST00000513436 SLC10A5Q5PT55 438 aa15.76■□□□□ 0.11
SERF1A-209ENST00000513436 PLBD2Q8NHP8 589 aa15.76■□□□□ 0.11
SERF1A-209ENST00000513436 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
SERF1A-209ENST00000513436 IQCA1LA6NCM1 817 aa15.75■□□□□ 0.11
SERF1A-209ENST00000513436 ZNF853P0CG23 659 aa15.75■□□□□ 0.11
SERF1A-209ENST00000513436 HCLS1P14317 486 aaPredicted RBP15.75■□□□□ 0.11
SERF1A-209ENST00000513436 DDX46Q7L014 1031 aaKnown RBP15.75■□□□□ 0.11
SERF1A-209ENST00000513436 RIC3Q7Z5B4 369 aa15.75■□□□□ 0.11
SERF1A-209ENST00000513436 PSMD1Q99460 953 aa15.75■□□□□ 0.11
SERF1A-209ENST00000513436 MRS2Q9HD23 443 aa15.75■□□□□ 0.11
SERF1A-209ENST00000513436 SH3TC1Q8TE82 1336 aa15.75■□□□□ 0.11
SERF1A-209ENST00000513436 RIC1Q4ADV7 1423 aa15.75■□□□□ 0.11
SERF1A-209ENST00000513436 FER1L6Q2WGJ9 1857 aa15.75■□□□□ 0.11
SERF1A-209ENST00000513436 CCDC88AQ3V6T2 1871 aa15.75■□□□□ 0.11
SERF1A-209ENST00000513436 TNRC6CQ9HCJ0 1690 aaKnown RBP15.74■□□□□ 0.11
SERF1A-209ENST00000513436 POTECB2RU33 542 aa15.74■□□□□ 0.11
SERF1A-209ENST00000513436 GOLGA2Q08379 1002 aa15.74■□□□□ 0.11
SERF1A-209ENST00000513436 C3orf67Q6ZVT6 689 aa15.74■□□□□ 0.11
SERF1A-209ENST00000513436 ZNF428Q96B54 188 aa15.74■□□□□ 0.11
SERF1A-209ENST00000513436 CACNA1SQ13698 1873 aa15.74■□□□□ 0.11
SERF1A-209ENST00000513436 ATP5J2-PTCD1G3V325 749 aa15.73■□□□□ 0.11
SERF1A-209ENST00000513436 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
SERF1A-209ENST00000513436 CCDC184Q52MB2 194 aa15.73■□□□□ 0.11
SERF1A-209ENST00000513436 BBOX1O75936 387 aa15.73■□□□□ 0.11
SERF1A-209ENST00000513436 LARGE2Q8N3Y3 721 aa15.73■□□□□ 0.11
SERF1A-209ENST00000513436 TIAM2Q8IVF5 1701 aa15.73■□□□□ 0.11
SERF1A-209ENST00000513436 HTRA3P83110 453 aa15.72■□□□□ 0.11
SERF1A-209ENST00000513436 CCDC30Q5VVM6 783 aa15.72■□□□□ 0.11
SERF1A-209ENST00000513436 ATP6V0A2Q9Y487 856 aa15.71■□□□□ 0.11
SERF1A-209ENST00000513436 ARFGEF2Q9Y6D5 1785 aa15.71■□□□□ 0.11
SERF1A-209ENST00000513436 ABCC4O15439 1325 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 FZD9O00144 591 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 DDX58O95786 925 aaKnown RBP15.7■□□□□ 0.1
SERF1A-209ENST00000513436 EAPPQ56P03 285 aaPredicted RBP15.7■□□□□ 0.1
SERF1A-209ENST00000513436 RTL5Q5HYW3 569 aaPredicted RBP15.7■□□□□ 0.1
SERF1A-209ENST00000513436 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 SUPT20HQ8NEM7 779 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 FAM89AQ96GI7 184 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 PHAXQ9H814 394 aaKnown RBP15.7■□□□□ 0.1
SERF1A-209ENST00000513436 HACL1Q9UJ83 578 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 CLEC11AQ9Y240 323 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 GJA3Q9Y6H8 435 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 ZNF541Q9H0D2 1346 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 NIM1KQ8IY84 436 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 DNAJC5GQ8N7S2 189 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 L3MBTL3Q96JM7 780 aaPredicted RBP15.7■□□□□ 0.1
SERF1A-209ENST00000513436 ISCA1Q9BUE6 129 aa15.7■□□□□ 0.1
SERF1A-209ENST00000513436 HSP90B1P14625 803 aaKnown RBP15.69■□□□□ 0.1
SERF1A-209ENST00000513436 GRAPQ13588 217 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms