RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 PPP1R42Q7Z4L9 355 aa20.92■□□□□ 0.94
HMGCL-209ENST00000513148 PTPRCP08575 1304 aa20.91■□□□□ 0.94
HMGCL-209ENST00000513148 ANKRD31Q8N7Z5 1873 aa20.91■□□□□ 0.94
HMGCL-209ENST00000513148 ST5P78524 1137 aa20.91■□□□□ 0.94
HMGCL-209ENST00000513148 CWF19L2Q2TBE0 894 aaKnown RBP20.91■□□□□ 0.94
HMGCL-209ENST00000513148 FRAT1Q92837 279 aaPredicted RBP20.91■□□□□ 0.94
HMGCL-209ENST00000513148 GOLGB1Q14789 3259 aaKnown RBP20.91■□□□□ 0.94
HMGCL-209ENST00000513148 N4BP2Q86UW6 1770 aaPredicted RBP20.9■□□□□ 0.94
HMGCL-209ENST00000513148 NTSR2O95665 410 aa20.9■□□□□ 0.94
HMGCL-209ENST00000513148 NLGN2Q8NFZ4 835 aa20.9■□□□□ 0.94
HMGCL-209ENST00000513148 SYT17Q9BSW7 474 aa20.9■□□□□ 0.94
HMGCL-209ENST00000513148 UTP14AQ9BVJ6 771 aaKnown RBP20.9■□□□□ 0.94
HMGCL-209ENST00000513148 NYXQ9GZU5 481 aa20.9■□□□□ 0.94
HMGCL-209ENST00000513148 KIF16BQ96L93 1317 aa20.9■□□□□ 0.94
HMGCL-209ENST00000513148 IGKV5-2P06315 115 aa20.9■□□□□ 0.94
HMGCL-209ENST00000513148 RTL5Q5HYW3 569 aaPredicted RBP20.9■□□□□ 0.94
HMGCL-209ENST00000513148 TRMT112Q9UI30 125 aaKnown RBP20.9■□□□□ 0.94
HMGCL-209ENST00000513148 ERFEQ4G0M1 354 aa20.89■□□□□ 0.93
HMGCL-209ENST00000513148 CD2APQ9Y5K6 639 aa20.89■□□□□ 0.93
HMGCL-209ENST00000513148 ABCC12Q96J65 1359 aa20.89■□□□□ 0.93
HMGCL-209ENST00000513148 BRPF1P55201 1214 aaPredicted RBP20.88■□□□□ 0.93
HMGCL-209ENST00000513148 TNRC6CQ9HCJ0 1690 aaKnown RBP20.88■□□□□ 0.93
HMGCL-209ENST00000513148 SYNE4Q8N205 404 aa20.88■□□□□ 0.93
HMGCL-209ENST00000513148 CWC25Q9NXE8 425 aaPredicted RBP20.88■□□□□ 0.93
HMGCL-209ENST00000513148 IBTKQ9P2D0 1353 aaPredicted RBP20.88■□□□□ 0.93
HMGCL-209ENST00000513148 NEURL1BA8MQ27 555 aa20.87■□□□□ 0.93
HMGCL-209ENST00000513148 FAM89AQ96GI7 184 aa20.87■□□□□ 0.93
HMGCL-209ENST00000513148 KIAA1551Q9HCM1 1747 aa20.87■□□□□ 0.93
HMGCL-209ENST00000513148 RCAN3Q9UKA8 241 aa20.87■□□□□ 0.93
HMGCL-209ENST00000513148 WWC3Q9ULE0 1092 aa20.87■□□□□ 0.93
HMGCL-209ENST00000513148 TRIM28Q13263 835 aaKnown RBP20.87■□□□□ 0.93
HMGCL-209ENST00000513148 CCDC191Q8NCU4 936 aa20.87■□□□□ 0.93
HMGCL-209ENST00000513148 JARID2Q92833 1246 aaPredicted RBP20.87■□□□□ 0.93
HMGCL-209ENST00000513148 PXDNLA1KZ92 1463 aa20.86■□□□□ 0.93
HMGCL-209ENST00000513148 LINS1Q8NG48 757 aa20.86■□□□□ 0.93
HMGCL-209ENST00000513148 COL11A2P13942 1736 aaPredicted RBP20.86■□□□□ 0.93
HMGCL-209ENST00000513148 SH3TC1Q8TE82 1336 aa20.85■□□□□ 0.93
HMGCL-209ENST00000513148 CHRNA5P30532 468 aa20.85■□□□□ 0.93
HMGCL-209ENST00000513148 BEND3Q5T5X7 828 aa20.85■□□□□ 0.93
HMGCL-209ENST00000513148 A0A0G2JLW4 131 aa20.85■□□□□ 0.93
HMGCL-209ENST00000513148 BRIP1Q9BX63 1249 aa20.85■□□□□ 0.93
HMGCL-209ENST00000513148 PPP4R2Q9NY27 417 aa20.85■□□□□ 0.93
HMGCL-209ENST00000513148 API5Q9BZZ5 524 aaKnown RBP20.84■□□□□ 0.93
HMGCL-209ENST00000513148 TNNQ9UQP3 1299 aa20.84■□□□□ 0.93
HMGCL-209ENST00000513148 DDX60Q8IY21 1712 aaKnown RBP20.84■□□□□ 0.93
HMGCL-209ENST00000513148 HCLS1P14317 486 aaPredicted RBP20.83■□□□□ 0.93
HMGCL-209ENST00000513148 DPEP1P16444 411 aa20.83■□□□□ 0.93
HMGCL-209ENST00000513148 IPO8O15397 1037 aaKnown RBP20.83■□□□□ 0.92
HMGCL-209ENST00000513148 TRIM27P14373 513 aa20.83■□□□□ 0.92
HMGCL-209ENST00000513148 PDE6BP35913 854 aa20.83■□□□□ 0.92
HMGCL-209ENST00000513148 TGFB2P61812 414 aa20.83■□□□□ 0.92
HMGCL-209ENST00000513148 GCKRQ14397 625 aa20.83■□□□□ 0.92
HMGCL-209ENST00000513148 ZBTB38Q8NAP3 1195 aaPredicted RBP20.83■□□□□ 0.92
HMGCL-209ENST00000513148 CLUAP1Q96AJ1 413 aa20.83■□□□□ 0.92
HMGCL-209ENST00000513148 SRCIN1Q9C0H9 1055 aa20.83■□□□□ 0.92
HMGCL-209ENST00000513148 RNF123Q5XPI4 1314 aa20.82■□□□□ 0.92
HMGCL-209ENST00000513148 ATF7IPQ6VMQ6 1270 aa20.82■□□□□ 0.92
HMGCL-209ENST00000513148 C2CD5Q86YS7 1000 aa20.82■□□□□ 0.92
HMGCL-209ENST00000513148 LAMB2P55268 1798 aa20.82■□□□□ 0.92
HMGCL-209ENST00000513148 ZKSCAN2Q63HK3 967 aa20.82■□□□□ 0.92
HMGCL-209ENST00000513148 UBE3BQ7Z3V4 1068 aa20.82■□□□□ 0.92
HMGCL-209ENST00000513148 ARHGAP45Q92619 1136 aa20.82■□□□□ 0.92
HMGCL-209ENST00000513148 DLEC1Q9Y238 1755 aa20.81■□□□□ 0.92
HMGCL-209ENST00000513148 PCCAP05165 728 aaPredicted RBP20.81■□□□□ 0.92
HMGCL-209ENST00000513148 CACNA1SQ13698 1873 aa20.8■□□□□ 0.92
HMGCL-209ENST00000513148 H0YIN7 160 aa20.8■□□□□ 0.92
HMGCL-209ENST00000513148 IRS4O14654 1257 aaPredicted RBP20.8■□□□□ 0.92
HMGCL-209ENST00000513148 C3orf67Q6ZVT6 689 aa20.8■□□□□ 0.92
HMGCL-209ENST00000513148 BRCA1P38398 1863 aaKnown RBP20.8■□□□□ 0.92
HMGCL-209ENST00000513148 ZNF622Q969S3 477 aaKnown RBP eCLIP20.79■□□□□ 0.92
HMGCL-209ENST00000513148 ALDH1L1O75891 902 aa20.78■□□□□ 0.92
HMGCL-209ENST00000513148 KCNA3P22001 575 aa20.78■□□□□ 0.92
HMGCL-209ENST00000513148 NLRP3Q96P20 1036 aa20.78■□□□□ 0.92
HMGCL-209ENST00000513148 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
HMGCL-209ENST00000513148 ABCC4O15439 1325 aa20.78■□□□□ 0.92
HMGCL-209ENST00000513148 UTRNP46939 3433 aa20.78■□□□□ 0.92
HMGCL-209ENST00000513148 PLIN1O60240 522 aa20.78■□□□□ 0.92
HMGCL-209ENST00000513148 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
HMGCL-209ENST00000513148 C9orf78Q9NZ63 289 aaPredicted RBP20.78■□□□□ 0.92
HMGCL-209ENST00000513148 SRGNP10124 158 aa20.77■□□□□ 0.92
HMGCL-209ENST00000513148 FTSJ3Q8IY81 847 aaKnown RBP20.77■□□□□ 0.92
HMGCL-209ENST00000513148 H7C1W4 665 aa20.77■□□□□ 0.91
HMGCL-209ENST00000513148 GRM8O00222 908 aa20.77■□□□□ 0.91
HMGCL-209ENST00000513148 CCT4P50991 539 aaKnown RBP20.77■□□□□ 0.91
HMGCL-209ENST00000513148 RPGRQ92834 1020 aaKnown RBP20.76■□□□□ 0.91
HMGCL-209ENST00000513148 MYH3P11055 1940 aa20.76■□□□□ 0.91
HMGCL-209ENST00000513148 PIM2Q9P1W9 311 aa20.75■□□□□ 0.91
HMGCL-209ENST00000513148 NOP58Q9Y2X3 529 aaKnown RBP20.75■□□□□ 0.91
HMGCL-209ENST00000513148 CDHR2Q9BYE9 1310 aa20.75■□□□□ 0.91
HMGCL-209ENST00000513148 KLRG2A4D1S0 409 aaPredicted RBP20.75■□□□□ 0.91
HMGCL-209ENST00000513148 CRY2Q49AN0 593 aa20.75■□□□□ 0.91
HMGCL-209ENST00000513148 MASTLQ96GX5 879 aa20.75■□□□□ 0.91
HMGCL-209ENST00000513148 CCDC85AQ96PX6 553 aaPredicted RBP20.75■□□□□ 0.91
HMGCL-209ENST00000513148 PDZRN3Q9UPQ7 1066 aa20.75■□□□□ 0.91
HMGCL-209ENST00000513148 BCS1LQ9Y276 419 aa20.75■□□□□ 0.91
HMGCL-209ENST00000513148 NBPF7P0C2Y1 421 aaPredicted RBP20.74■□□□□ 0.91
HMGCL-209ENST00000513148 CASP7P55210 303 aa20.74■□□□□ 0.91
HMGCL-209ENST00000513148 DZIP1LQ8IYY4 767 aaKnown RBP20.74■□□□□ 0.91
HMGCL-209ENST00000513148 PDE8AO60658 829 aa20.73■□□□□ 0.91
HMGCL-209ENST00000513148 RLBP1P12271 317 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms