RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 UTRNP46939 3433 aa12.8□□□□□ -0.36
TRIO-220ENST00000512979 HOXB3P14651 431 aaPredicted RBP12.79□□□□□ -0.36
TRIO-220ENST00000512979 CD46P15529 392 aa12.79□□□□□ -0.36
TRIO-220ENST00000512979 COL9A1P20849 921 aa12.79□□□□□ -0.36
TRIO-220ENST00000512979 IL13P35225 146 aa12.79□□□□□ -0.36
TRIO-220ENST00000512979 PPP2R2DQ66LE6 453 aa12.79□□□□□ -0.36
TRIO-220ENST00000512979 CCDC97Q96F63 343 aaPredicted RBP12.79□□□□□ -0.36
TRIO-220ENST00000512979 MTHFSP49914 203 aa12.78□□□□□ -0.36
TRIO-220ENST00000512979 CABP4P57796 275 aa12.78□□□□□ -0.36
TRIO-220ENST00000512979 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
TRIO-220ENST00000512979 SERPINA10Q9UK55 444 aa12.78□□□□□ -0.36
TRIO-220ENST00000512979 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
TRIO-220ENST00000512979 CC2D1BQ5T0F9 858 aaKnown RBP12.77□□□□□ -0.37
TRIO-220ENST00000512979 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
TRIO-220ENST00000512979 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
TRIO-220ENST00000512979 KDRP35968 1356 aa12.77□□□□□ -0.37
TRIO-220ENST00000512979 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
TRIO-220ENST00000512979 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
TRIO-220ENST00000512979 YBX3P16989 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRIO-220ENST00000512979 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
TRIO-220ENST00000512979 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
TRIO-220ENST00000512979 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
TRIO-220ENST00000512979 SPTLC1O15269 473 aa12.75□□□□□ -0.37
TRIO-220ENST00000512979 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
TRIO-220ENST00000512979 GRIN3BO60391 1043 aa12.75□□□□□ -0.37
TRIO-220ENST00000512979 CHD4Q14839 1912 aa12.75□□□□□ -0.37
TRIO-220ENST00000512979 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
TRIO-220ENST00000512979 LHX6Q9UPM6 363 aa12.75□□□□□ -0.37
TRIO-220ENST00000512979 RTCBQ9Y3I0 505 aaKnown RBP12.75□□□□□ -0.37
TRIO-220ENST00000512979 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
TRIO-220ENST00000512979 CNGB1Q14028 1251 aaPredicted RBP12.74□□□□□ -0.37
TRIO-220ENST00000512979 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
TRIO-220ENST00000512979 TUSC1Q2TAM9 212 aa12.74□□□□□ -0.37
TRIO-220ENST00000512979 RSBN1LQ6PCB5 846 aaPredicted RBP12.74□□□□□ -0.37
TRIO-220ENST00000512979 NUDT18Q6ZVK8 323 aa12.74□□□□□ -0.37
TRIO-220ENST00000512979 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
TRIO-220ENST00000512979 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
TRIO-220ENST00000512979 MTMR14Q8NCE2 650 aa12.74□□□□□ -0.37
TRIO-220ENST00000512979 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
TRIO-220ENST00000512979 CNTNAP4Q9C0A0 1308 aa12.73□□□□□ -0.37
TRIO-220ENST00000512979 C3orf80F5H4A9 247 aa12.73□□□□□ -0.37
TRIO-220ENST00000512979 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
TRIO-220ENST00000512979 HMOX1P09601 288 aa12.73□□□□□ -0.37
TRIO-220ENST00000512979 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
TRIO-220ENST00000512979 TRAPPC3LQ5T215 181 aa12.73□□□□□ -0.37
TRIO-220ENST00000512979 RC3H1Q5TC82 1133 aaKnown RBP12.73□□□□□ -0.37
TRIO-220ENST00000512979 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
TRIO-220ENST00000512979 MOXD2PA6NHM9 499 aa12.72□□□□□ -0.37
TRIO-220ENST00000512979 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
TRIO-220ENST00000512979 MMP10P09238 476 aa12.72□□□□□ -0.37
TRIO-220ENST00000512979 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
TRIO-220ENST00000512979 BCL2L12Q9HB09 334 aa12.72□□□□□ -0.37
TRIO-220ENST00000512979 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
TRIO-220ENST00000512979 DNAJB2P25686 324 aa12.71□□□□□ -0.37
TRIO-220ENST00000512979 WWC3Q9ULE0 1092 aa12.71□□□□□ -0.37
TRIO-220ENST00000512979 PPP1R3GB7ZBB8 358 aa12.7□□□□□ -0.38
TRIO-220ENST00000512979 RPS6KA4O75676 772 aa12.7□□□□□ -0.38
TRIO-220ENST00000512979 NDUFV2P19404 249 aa12.7□□□□□ -0.38
TRIO-220ENST00000512979 RFC4P35249 363 aa12.7□□□□□ -0.38
TRIO-220ENST00000512979 QPCTQ16769 361 aa12.7□□□□□ -0.38
TRIO-220ENST00000512979 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
TRIO-220ENST00000512979 LGR6Q9HBX8 967 aa12.7□□□□□ -0.38
TRIO-220ENST00000512979 ZNF831Q5JPB2 1677 aa12.7□□□□□ -0.38
TRIO-220ENST00000512979 NPC1L1Q9UHC9 1359 aa12.69□□□□□ -0.38
TRIO-220ENST00000512979 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
TRIO-220ENST00000512979 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
TRIO-220ENST00000512979 PTPREP23469 700 aa12.69□□□□□ -0.38
TRIO-220ENST00000512979 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
TRIO-220ENST00000512979 MTHFSDQ2M296 383 aaKnown RBP12.69□□□□□ -0.38
TRIO-220ENST00000512979 ZNF710Q8N1W2 664 aa12.69□□□□□ -0.38
TRIO-220ENST00000512979 NLGN1Q8N2Q7 840 aa12.69□□□□□ -0.38
TRIO-220ENST00000512979 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
TRIO-220ENST00000512979 GYS1P13807 737 aa12.68□□□□□ -0.38
TRIO-220ENST00000512979 TATDN2Q93075 761 aa12.68□□□□□ -0.38
TRIO-220ENST00000512979 TMEM134Q9H6X4 195 aa12.68□□□□□ -0.38
TRIO-220ENST00000512979 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
TRIO-220ENST00000512979 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
TRIO-220ENST00000512979 LILRB3O75022 631 aa12.67□□□□□ -0.38
TRIO-220ENST00000512979 POTEJP0CG39 1038 aa12.67□□□□□ -0.38
TRIO-220ENST00000512979 SLC39A6Q13433 755 aa12.67□□□□□ -0.38
TRIO-220ENST00000512979 NECTIN2Q92692 538 aa12.67□□□□□ -0.38
TRIO-220ENST00000512979 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
TRIO-220ENST00000512979 GOLGB1Q14789 3259 aaKnown RBP12.67□□□□□ -0.38
TRIO-220ENST00000512979 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
TRIO-220ENST00000512979 CICQ96RK0 1608 aaPredicted RBP12.66□□□□□ -0.38
TRIO-220ENST00000512979 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
TRIO-220ENST00000512979 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
TRIO-220ENST00000512979 AP1G2O75843 785 aa12.66□□□□□ -0.38
TRIO-220ENST00000512979 GJA5P36382 358 aa12.66□□□□□ -0.38
TRIO-220ENST00000512979 C1QTNF8P60827 252 aa12.66□□□□□ -0.38
TRIO-220ENST00000512979 DNAJC10Q8IXB1 793 aa12.66□□□□□ -0.38
TRIO-220ENST00000512979 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
TRIO-220ENST00000512979 SRP68Q9UHB9 627 aaKnown RBP12.66□□□□□ -0.38
TRIO-220ENST00000512979 PARP3Q9Y6F1 533 aa12.66□□□□□ -0.38
TRIO-220ENST00000512979 MRC1P22897 1456 aa12.65□□□□□ -0.38
TRIO-220ENST00000512979 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
TRIO-220ENST00000512979 GIGYF1O75420 1035 aaPredicted RBP12.65□□□□□ -0.38
TRIO-220ENST00000512979 RTL5Q5HYW3 569 aaPredicted RBP12.65□□□□□ -0.38
TRIO-220ENST00000512979 INTS5Q6P9B9 1019 aaKnown RBP12.65□□□□□ -0.38
TRIO-220ENST00000512979 PACS2Q86VP3 889 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms