RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 ABCC12Q96J65 1359 aa8.42□□□□□ -1.06
KDM3B-208ENST00000512928 NUP98P52948 1817 aa8.42□□□□□ -1.06
KDM3B-208ENST00000512928 HOXB7P09629 217 aa8.41□□□□□ -1.06
KDM3B-208ENST00000512928 LMNB1P20700 586 aa8.41□□□□□ -1.06
KDM3B-208ENST00000512928 PARP10Q53GL7 1025 aa8.41□□□□□ -1.06
KDM3B-208ENST00000512928 HSP90AB3PQ58FF7 597 aa8.41□□□□□ -1.06
KDM3B-208ENST00000512928 RRAGCQ9HB90 399 aa8.41□□□□□ -1.06
KDM3B-208ENST00000512928 KDM2BQ8NHM5 1336 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 NFKBIEO00221 500 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 TCERG1O14776 1098 aaKnown RBP8.4□□□□□ -1.06
KDM3B-208ENST00000512928 TOMM70O94826 608 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 ZNF853P0CG23 659 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 APLP1P51693 650 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 GOLGA2Q08379 1002 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 SOGA3Q5TF21 947 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 LRP10Q7Z4F1 713 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 WWC1Q8IX03 1113 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 C16orf71Q8IYS4 520 aaPredicted RBP8.4□□□□□ -1.06
KDM3B-208ENST00000512928 ZNF34Q8IZ26 560 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 C8orf58Q8NAV2 365 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 UTP14AQ9BVJ6 771 aaKnown RBP8.4□□□□□ -1.06
KDM3B-208ENST00000512928 TAOK3Q9H2K8 898 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 HYPKQ9NX55 129 aa8.4□□□□□ -1.06
KDM3B-208ENST00000512928 IBTKQ9P2D0 1353 aaPredicted RBP8.39□□□□□ -1.07
KDM3B-208ENST00000512928 ATP5J2-PTCD1G3V325 749 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 CCER2I3L3R5 266 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 NTSR2O95665 410 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 ALDH1B1P30837 517 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 CCDC93Q567U6 631 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 OLFM4Q6UX06 510 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 ANKRD13DQ6ZTN6 518 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 RIC3Q7Z5B4 369 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 PLBD2Q8NHP8 589 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 TRMT112Q9UI30 125 aaKnown RBP8.39□□□□□ -1.07
KDM3B-208ENST00000512928 ANKRD36CQ5JPF3 1778 aa8.39□□□□□ -1.07
KDM3B-208ENST00000512928 SLX4Q8IY92 1834 aa8.38□□□□□ -1.07
KDM3B-208ENST00000512928 HCLS1P14317 486 aaPredicted RBP8.38□□□□□ -1.07
KDM3B-208ENST00000512928 TCIRG1Q13488 830 aa8.38□□□□□ -1.07
KDM3B-208ENST00000512928 CCDC27Q2M243 656 aa8.38□□□□□ -1.07
KDM3B-208ENST00000512928 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
KDM3B-208ENST00000512928 CCDC30Q5VVM6 783 aa8.38□□□□□ -1.07
KDM3B-208ENST00000512928 NLRP10Q86W26 655 aa8.38□□□□□ -1.07
KDM3B-208ENST00000512928 TSPYL6Q8N831 410 aa8.38□□□□□ -1.07
KDM3B-208ENST00000512928 RBM17Q96I25 401 aaKnown RBP8.38□□□□□ -1.07
KDM3B-208ENST00000512928 NLRP3Q96P20 1036 aa8.38□□□□□ -1.07
KDM3B-208ENST00000512928 STK31Q9BXU1 1019 aa8.38□□□□□ -1.07
KDM3B-208ENST00000512928 TMX4Q9H1E5 349 aaPredicted RBP8.38□□□□□ -1.07
KDM3B-208ENST00000512928 PHAXQ9H814 394 aaKnown RBP8.38□□□□□ -1.07
KDM3B-208ENST00000512928 ARFGEF2Q9Y6D5 1785 aa8.38□□□□□ -1.07
KDM3B-208ENST00000512928 SH3TC1Q8TE82 1336 aa8.37□□□□□ -1.07
KDM3B-208ENST00000512928 KLRG2A4D1S0 409 aaPredicted RBP8.37□□□□□ -1.07
KDM3B-208ENST00000512928 PPEF1O14829 653 aaPredicted RBP8.37□□□□□ -1.07
KDM3B-208ENST00000512928 DDX58O95786 925 aaKnown RBP8.37□□□□□ -1.07
KDM3B-208ENST00000512928 TWISTNBQ3B726 338 aaPredicted RBP8.37□□□□□ -1.07
KDM3B-208ENST00000512928 CRY2Q49AN0 593 aa8.37□□□□□ -1.07
KDM3B-208ENST00000512928 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
KDM3B-208ENST00000512928 C3orf67Q6ZVT6 689 aa8.37□□□□□ -1.07
KDM3B-208ENST00000512928 SYNE4Q8N205 404 aa8.37□□□□□ -1.07
KDM3B-208ENST00000512928 KLRG1Q96E93 195 aa8.37□□□□□ -1.07
KDM3B-208ENST00000512928 CHMP4AQ9BY43 222 aa8.37□□□□□ -1.07
KDM3B-208ENST00000512928 IL16Q14005 1332 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 RNF123Q5XPI4 1314 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 FANCIQ9NVI1 1328 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 ZC3H4Q9UPT8 1303 aaKnown RBP8.36□□□□□ -1.07
KDM3B-208ENST00000512928 POTEIP0CG38 1075 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 POTEJP0CG39 1038 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
KDM3B-208ENST00000512928 DPY19L2Q6NUT2 758 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 SLC51AQ86UW1 340 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 RTKN2Q8IZC4 609 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 RBM46Q8TBY0 533 aaKnown RBP8.36□□□□□ -1.07
KDM3B-208ENST00000512928 FAM89AQ96GI7 184 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 MYD88Q99836 296 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 ZNF277Q9NRM2 450 aaPredicted RBP8.36□□□□□ -1.07
KDM3B-208ENST00000512928 RIC1Q4ADV7 1423 aa8.36□□□□□ -1.07
KDM3B-208ENST00000512928 LTBP3Q9NS15 1303 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 FER1L6Q2WGJ9 1857 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 GLTPD2A6NH11 291 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 POTECB2RU33 542 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 SLC4A2P04920 1241 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 KCNA4P22459 653 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 DDX46Q7L014 1031 aaKnown RBP8.35□□□□□ -1.07
KDM3B-208ENST00000512928 WDR63Q8IWG1 891 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 C7orf43Q8WVR3 580 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 CRAMP1Q96RY5 1269 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 MYH16Q9H6N6 1097 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 MAP3K2Q9Y2U5 619 aa8.35□□□□□ -1.07
KDM3B-208ENST00000512928 DICER1Q9UPY3 1922 aaKnown RBP8.35□□□□□ -1.07
KDM3B-208ENST00000512928 ABCC4O15439 1325 aa8.34□□□□□ -1.07
KDM3B-208ENST00000512928 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
KDM3B-208ENST00000512928 IARSP41252 1262 aaKnown RBP8.34□□□□□ -1.07
KDM3B-208ENST00000512928 EXOSC9Q06265 439 aaKnown RBP8.34□□□□□ -1.07
KDM3B-208ENST00000512928 NEXNQ0ZGT2 675 aa8.34□□□□□ -1.07
KDM3B-208ENST00000512928 SLC10A5Q5PT55 438 aa8.34□□□□□ -1.07
KDM3B-208ENST00000512928 JMYQ8N9B5 988 aa8.34□□□□□ -1.07
KDM3B-208ENST00000512928 JDP2Q8WYK2 163 aa8.34□□□□□ -1.07
KDM3B-208ENST00000512928 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
KDM3B-208ENST00000512928 ISCA1Q9BUE6 129 aa8.34□□□□□ -1.07
KDM3B-208ENST00000512928 LAMB2P55268 1798 aa8.33□□□□□ -1.08
KDM3B-208ENST00000512928 PI4KAP2A4QPH2 592 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms