RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 NUDT16Q96DE0 195 aaKnown RBP6.98□□□□□ -1.29
HTT-210ENST00000512909 ASB16Q96NS5 453 aa6.98□□□□□ -1.29
HTT-210ENST00000512909 BCL2L13Q9BXK5 485 aa6.98□□□□□ -1.29
HTT-210ENST00000512909 BRD7Q9NPI1 651 aa6.98□□□□□ -1.29
HTT-210ENST00000512909 CCDC87Q9NVE4 849 aa6.98□□□□□ -1.29
HTT-210ENST00000512909 UBAP1LF5GYI3 381 aa6.97□□□□□ -1.29
HTT-210ENST00000512909 PDGFAP04085 211 aa6.97□□□□□ -1.29
HTT-210ENST00000512909 RBM25P49756 843 aaKnown RBP6.97□□□□□ -1.29
HTT-210ENST00000512909 EAPPQ56P03 285 aaPredicted RBP6.97□□□□□ -1.29
HTT-210ENST00000512909 RBCK1Q9BYM8 510 aa6.97□□□□□ -1.29
HTT-210ENST00000512909 RTCBQ9Y3I0 505 aaKnown RBP6.97□□□□□ -1.29
HTT-210ENST00000512909 PCDHGC4Q9Y5F7 938 aa6.97□□□□□ -1.29
HTT-210ENST00000512909 ZBTB39O15060 712 aa6.96□□□□□ -1.3
HTT-210ENST00000512909 MAPK8P45983 427 aa6.96□□□□□ -1.3
HTT-210ENST00000512909 TTC39BQ5VTQ0 682 aaPredicted RBP6.96□□□□□ -1.3
HTT-210ENST00000512909 ZNF438Q7Z4V0 828 aa6.96□□□□□ -1.3
HTT-210ENST00000512909 TRIM22Q8IYM9 498 aa6.96□□□□□ -1.3
HTT-210ENST00000512909 ZCCHC2Q9C0B9 1178 aaKnown RBP6.96□□□□□ -1.3
HTT-210ENST00000512909 KCNH4Q9UQ05 1017 aa6.96□□□□□ -1.3
HTT-210ENST00000512909 DCDC2BA2VCK2 349 aa6.95□□□□□ -1.3
HTT-210ENST00000512909 SLC35F4A4IF30 521 aa6.95□□□□□ -1.3
HTT-210ENST00000512909 FZD6O60353 706 aa6.95□□□□□ -1.3
HTT-210ENST00000512909 SAMD5Q5TGI4 173 aa6.95□□□□□ -1.3
HTT-210ENST00000512909 SV2AQ7L0J3 742 aa6.95□□□□□ -1.3
HTT-210ENST00000512909 RGS22Q8NE09 1264 aa6.95□□□□□ -1.3
HTT-210ENST00000512909 ZNF775Q96BV0 537 aaPredicted RBP6.95□□□□□ -1.3
HTT-210ENST00000512909 AMOTL2Q9Y2J4 779 aa6.95□□□□□ -1.3
HTT-210ENST00000512909 XYLBO75191 536 aa6.94□□□□□ -1.3
HTT-210ENST00000512909 ITGA6P23229 1130 aa6.94□□□□□ -1.3
HTT-210ENST00000512909 TYRO3Q06418 890 aa6.94□□□□□ -1.3
HTT-210ENST00000512909 TMC7Q7Z402 723 aa6.94□□□□□ -1.3
HTT-210ENST00000512909 NIF3L1Q9GZT8 377 aa6.94□□□□□ -1.3
HTT-210ENST00000512909 MARK1Q9P0L2 795 aa6.94□□□□□ -1.3
HTT-210ENST00000512909 PRR12Q9ULL5 1215 aa6.94□□□□□ -1.3
HTT-210ENST00000512909 NSFL1CQ9UNZ2 370 aaKnown RBP6.94□□□□□ -1.3
HTT-210ENST00000512909 FAM157BP0CG42 384 aa6.93□□□□□ -1.3
HTT-210ENST00000512909 XPCQ01831 940 aaPredicted RBP6.93□□□□□ -1.3
HTT-210ENST00000512909 LAMC2Q13753 1193 aa6.93□□□□□ -1.3
HTT-210ENST00000512909 GIPC2Q8TF65 315 aa6.93□□□□□ -1.3
HTT-210ENST00000512909 GTPBP3Q969Y2 492 aaKnown RBP6.93□□□□□ -1.3
HTT-210ENST00000512909 BCS1LQ9Y276 419 aa6.93□□□□□ -1.3
HTT-210ENST00000512909 SENP3-EIF4A1A0A087X0R7 540 aa6.92□□□□□ -1.3
HTT-210ENST00000512909 PHACTR2O75167 634 aa6.92□□□□□ -1.3
HTT-210ENST00000512909 SNRPBP14678 240 aaKnown RBP6.92□□□□□ -1.3
HTT-210ENST00000512909 INPP5BP32019 993 aa6.92□□□□□ -1.3
HTT-210ENST00000512909 CCINQ13939 588 aa6.92□□□□□ -1.3
HTT-210ENST00000512909 COL19A1Q14993 1142 aa6.92□□□□□ -1.3
HTT-210ENST00000512909 PDE12Q6L8Q7 609 aaKnown RBP6.92□□□□□ -1.3
HTT-210ENST00000512909 KRT25Q7Z3Z0 450 aa6.92□□□□□ -1.3
HTT-210ENST00000512909 MRS2Q9HD23 443 aa6.92□□□□□ -1.3
HTT-210ENST00000512909 ATXN7L1Q9ULK2 861 aaPredicted RBP6.92□□□□□ -1.3
HTT-210ENST00000512909 USP20Q9Y2K6 914 aa6.92□□□□□ -1.3
HTT-210ENST00000512909 PHF20L1A8MW92 1017 aa6.91□□□□□ -1.3
HTT-210ENST00000512909 E9PSI1 815 aa6.91□□□□□ -1.3
HTT-210ENST00000512909 OPLAHO14841 1288 aa6.91□□□□□ -1.3
HTT-210ENST00000512909 DBN1Q16643 649 aa6.91□□□□□ -1.3
HTT-210ENST00000512909 GJD3Q8N144 294 aa6.91□□□□□ -1.3
HTT-210ENST00000512909 VWA5B2Q8N398 1253 aa6.91□□□□□ -1.3
HTT-210ENST00000512909 SLC16A10Q8TF71 515 aa6.91□□□□□ -1.3
HTT-210ENST00000512909 PMEPA1Q969W9 287 aa6.91□□□□□ -1.3
HTT-210ENST00000512909 C11orf16Q9NQ32 467 aa6.91□□□□□ -1.3
HTT-210ENST00000512909 CPNE3O75131 537 aaKnown RBP6.9□□□□□ -1.3
HTT-210ENST00000512909 PPFIA3O75145 1194 aa6.9□□□□□ -1.3
HTT-210ENST00000512909 RARAP10276 462 aa6.9□□□□□ -1.3
HTT-210ENST00000512909 MAPTP10636 758 aaKnown RBP6.9□□□□□ -1.3
HTT-210ENST00000512909 FAM26DQ5JW98 314 aa6.9□□□□□ -1.3
HTT-210ENST00000512909 DNAJC14Q6Y2X3 702 aaPredicted RBP6.9□□□□□ -1.3
HTT-210ENST00000512909 NLRP13Q86W25 1043 aa6.9□□□□□ -1.3
HTT-210ENST00000512909 SNX29Q8TEQ0 813 aa6.9□□□□□ -1.3
HTT-210ENST00000512909 C7orf43Q8WVR3 580 aa6.9□□□□□ -1.3
HTT-210ENST00000512909 ZNF837Q96EG3 531 aaPredicted RBP6.9□□□□□ -1.3
HTT-210ENST00000512909 ABHD17AQ96GS6 310 aa6.9□□□□□ -1.3
HTT-210ENST00000512909 NLRP2Q9NX02 1062 aa6.9□□□□□ -1.3
HTT-210ENST00000512909 DMGDHQ9UI17 866 aaKnown RBP6.9□□□□□ -1.3
HTT-210ENST00000512909 PNMA6FA0A0J9YX94 578 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 LDHBP07195 334 aaKnown RBP6.89□□□□□ -1.31
HTT-210ENST00000512909 PSAPP07602 524 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 BMP4P12644 408 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 FGFR3P22607 806 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 TBC1D8BQ0IIM8 1120 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 SFSWAPQ12872 951 aaKnown RBP6.89□□□□□ -1.31
HTT-210ENST00000512909 ECM1Q16610 540 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 ALG1LQ6GMV1 187 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 BHMTQ93088 406 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 SPACA7Q96KW9 195 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 FAM129BQ96TA1 746 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 CFHR5Q9BXR6 569 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 ELP3Q9H9T3 547 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 EFCC1Q9HA90 598 aa6.89□□□□□ -1.31
HTT-210ENST00000512909 ABI2Q9NYB9 513 aaPredicted RBP6.89□□□□□ -1.31
HTT-210ENST00000512909 A6NHS1 94 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 TREHO43280 583 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 SASH3O75995 380 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 CD33P20138 364 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 CES1P23141 567 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 TNP2Q05952 138 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 SPEM2Q0P670 501 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 NPAS4Q8IUM7 802 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 ALKBH8Q96BT7 664 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms