RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PLCD4Q9BRC7 762 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 ALDH1L1O75891 902 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 MTIF2P46199 727 aaKnown RBP14.38□□□□□ -0.11
COL11A1-210ENST00000512756 FAM107BQ9H098 131 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 ANKIB1Q9P2G1 1089 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 BMP15O95972 392 aa14.37□□□□□ -0.11
COL11A1-210ENST00000512756 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
COL11A1-210ENST00000512756 MFSD6Q6ZSS7 791 aa14.37□□□□□ -0.11
COL11A1-210ENST00000512756 CUL5Q93034 780 aa14.37□□□□□ -0.11
COL11A1-210ENST00000512756 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
COL11A1-210ENST00000512756 ACEP12821 1306 aa14.37□□□□□ -0.11
COL11A1-210ENST00000512756 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
COL11A1-210ENST00000512756 HCLS1P14317 486 aaPredicted RBP14.37□□□□□ -0.11
COL11A1-210ENST00000512756 CDC5LQ99459 802 aaKnown RBP14.37□□□□□ -0.11
COL11A1-210ENST00000512756 MEIS3Q99687 375 aa14.37□□□□□ -0.11
COL11A1-210ENST00000512756 ZBTB3Q9H5J0 574 aa14.37□□□□□ -0.11
COL11A1-210ENST00000512756 TRIM21P19474 475 aaKnown RBP14.37□□□□□ -0.11
COL11A1-210ENST00000512756 PUS7Q96PZ0 661 aaKnown RBP14.37□□□□□ -0.11
COL11A1-210ENST00000512756 ATP8B2P98198 1209 aa14.37□□□□□ -0.11
COL11A1-210ENST00000512756 MRPL50Q8N5N7 158 aaKnown RBP14.37□□□□□ -0.11
COL11A1-210ENST00000512756 DYDC1Q8WWB3 177 aa14.37□□□□□ -0.11
COL11A1-210ENST00000512756 GPATCH8Q9UKJ3 1502 aaKnown RBP14.37□□□□□ -0.11
COL11A1-210ENST00000512756 PDE4BQ07343 736 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 KRI1Q8N9T8 703 aaKnown RBP14.36□□□□□ -0.11
COL11A1-210ENST00000512756 KCNG4Q8TDN1 519 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 LRRC27Q9C0I9 530 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 DNAI2Q9GZS0 605 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 FANCAO15360 1455 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 DENND4BO75064 1496 aaPredicted RBP14.36□□□□□ -0.11
COL11A1-210ENST00000512756 UBA7P41226 1012 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 PRKCSHP14314 528 aaPredicted RBP14.36□□□□□ -0.11
COL11A1-210ENST00000512756 BMS1Q14692 1282 aaKnown RBP14.36□□□□□ -0.11
COL11A1-210ENST00000512756 CEP135Q66GS9 1140 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 ANKRD13DQ6ZTN6 518 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 EHBP1Q8NDI1 1231 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 RBM25P49756 843 aaKnown RBP14.36□□□□□ -0.11
COL11A1-210ENST00000512756 CETN1Q12798 172 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 CCDC96Q2M329 555 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 CCDC91Q7Z6B0 441 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 MICU3Q86XE3 530 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 FAM200AQ8TCP9 573 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 BRF1Q92994 677 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 EHMT1Q9H9B1 1298 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 CLCN1P35523 988 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 IFFO1Q0D2I5 559 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 TSHZ3Q63HK5 1081 aa14.36□□□□□ -0.11
COL11A1-210ENST00000512756 MAP2K1Q02750 393 aaPredicted RBP14.35□□□□□ -0.11
COL11A1-210ENST00000512756 CCDC178Q5BJE1 867 aa14.35□□□□□ -0.11
COL11A1-210ENST00000512756 MICALCLQ6ZW33 695 aa14.35□□□□□ -0.11
COL11A1-210ENST00000512756 TMTC2Q8N394 836 aa14.35□□□□□ -0.11
COL11A1-210ENST00000512756 RMND1Q9NWS8 449 aa14.35□□□□□ -0.11
COL11A1-210ENST00000512756 SYKP43405 635 aa14.35□□□□□ -0.11
COL11A1-210ENST00000512756 C8orf34Q49A92 452 aa14.35□□□□□ -0.11
COL11A1-210ENST00000512756 GIMAP6Q6P9H5 292 aa14.35□□□□□ -0.11
COL11A1-210ENST00000512756 UBA5Q9GZZ9 404 aa14.35□□□□□ -0.11
COL11A1-210ENST00000512756 TUBB4AP04350 444 aa14.35□□□□□ -0.11
COL11A1-210ENST00000512756 GCOM1H8Y6P7 765 aaPredicted RBP14.34□□□□□ -0.11
COL11A1-210ENST00000512756 MYZAPP0CAP1 466 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 SNRKQ9NRH2 765 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 SPTY2D1Q68D10 685 aaPredicted RBP14.34□□□□□ -0.11
COL11A1-210ENST00000512756 PPP4R3AQ6IN85 833 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
COL11A1-210ENST00000512756 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 TAOK3Q9H2K8 898 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 RBM8AQ9Y5S9 174 aaKnown RBP14.34□□□□□ -0.11
COL11A1-210ENST00000512756 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 ATP5J2-PTCD1G3V325 749 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 BAG3O95817 575 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 NBPF7P0C2Y1 421 aaPredicted RBP14.34□□□□□ -0.11
COL11A1-210ENST00000512756 KRT23Q9C075 422 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 MAPKBP1O60336 1514 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 HAND2P61296 217 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 KAT14Q9H8E8 782 aa14.34□□□□□ -0.11
COL11A1-210ENST00000512756 KLF18A0A0U1RQI7 1052 aa14.33□□□□□ -0.11
COL11A1-210ENST00000512756 CCDC40Q4G0X9 1142 aa14.33□□□□□ -0.11
COL11A1-210ENST00000512756 KRT28Q7Z3Y7 464 aa14.33□□□□□ -0.11
COL11A1-210ENST00000512756 CTAGE1Q96RT6 745 aa14.33□□□□□ -0.11
COL11A1-210ENST00000512756 USP48Q86UV5 1035 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 PRAG1Q86YV5 1406 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 TSPY2A6NKD2 308 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 EXOC5O00471 708 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 GPTP24298 496 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 SPAG1Q07617 926 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 STXBP4Q6ZWJ1 553 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 MRPS27Q92552 414 aaKnown RBP14.33□□□□□ -0.12
COL11A1-210ENST00000512756 GNG11P61952 73 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 SMC5Q8IY18 1101 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 CNNM2Q9H8M5 875 aa14.33□□□□□ -0.12
COL11A1-210ENST00000512756 F13A1P00488 732 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 XRCC6P12956 609 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 MCMDC2Q4G0Z9 681 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 ANKRD24Q8TF21 1146 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 TTC41PQ6P2S7 1318 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 POLR3GO15318 223 aaPredicted RBP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 IDEP14735 1019 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 PPP4R3BQ5MIZ7 849 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 NECAB1Q8N987 351 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 DCTPP1Q9H773 170 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms