RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 ZNF598Q86UK7 904 aaKnown RBP11.05□□□□□ -0.64
RFC1-214ENST00000512726 SUSD3Q96L08 255 aa11.05□□□□□ -0.64
RFC1-214ENST00000512726 TIMP2P16035 220 aa11.04□□□□□ -0.64
RFC1-214ENST00000512726 IDH3AP50213 366 aa11.04□□□□□ -0.64
RFC1-214ENST00000512726 RNF144AP50876 292 aaPredicted RBP11.04□□□□□ -0.64
RFC1-214ENST00000512726 NBPF10Q6P3W6 841 aaKnown RBP11.04□□□□□ -0.64
RFC1-214ENST00000512726 DPH6Q7L8W6 267 aa11.04□□□□□ -0.64
RFC1-214ENST00000512726 HS2ST1Q7LGA3 356 aa11.04□□□□□ -0.64
RFC1-214ENST00000512726 SNX29Q8TEQ0 813 aa11.04□□□□□ -0.64
RFC1-214ENST00000512726 C7orf43Q8WVR3 580 aa11.04□□□□□ -0.64
RFC1-214ENST00000512726 C12orf49Q9H741 205 aa11.04□□□□□ -0.64
RFC1-214ENST00000512726 DDX41Q9UJV9 622 aaKnown RBP11.04□□□□□ -0.64
RFC1-214ENST00000512726 INPP5FQ9Y2H2 1132 aa11.04□□□□□ -0.64
RFC1-214ENST00000512726 TNFRSF21O75509 655 aa11.03□□□□□ -0.64
RFC1-214ENST00000512726 TNNI2P48788 182 aa11.03□□□□□ -0.64
RFC1-214ENST00000512726 ARSDP51689 593 aa11.03□□□□□ -0.64
RFC1-214ENST00000512726 PDE12Q6L8Q7 609 aaKnown RBP11.03□□□□□ -0.64
RFC1-214ENST00000512726 ZNF438Q7Z4V0 828 aa11.03□□□□□ -0.64
RFC1-214ENST00000512726 USP48Q86UV5 1035 aa11.03□□□□□ -0.64
RFC1-214ENST00000512726 CCDC74AQ96AQ1 378 aa11.03□□□□□ -0.64
RFC1-214ENST00000512726 ARMC5Q96C12 935 aa11.03□□□□□ -0.64
RFC1-214ENST00000512726 GMLQ99445 158 aa11.03□□□□□ -0.64
RFC1-214ENST00000512726 NEUROD4Q9HD90 331 aa11.03□□□□□ -0.64
RFC1-214ENST00000512726 TTC24A2A3L6 582 aaPredicted RBP11.02□□□□□ -0.65
RFC1-214ENST00000512726 PTPN12Q05209 780 aaKnown RBP11.02□□□□□ -0.65
RFC1-214ENST00000512726 BICDL1Q6ZP65 573 aa11.02□□□□□ -0.65
RFC1-214ENST00000512726 MEIOBQ8N635 442 aa11.02□□□□□ -0.65
RFC1-214ENST00000512726 DNAJC2Q99543 621 aaKnown RBP11.02□□□□□ -0.65
RFC1-214ENST00000512726 TSEN34Q9BSV6 310 aaKnown RBP11.02□□□□□ -0.65
RFC1-214ENST00000512726 PKD2L1Q9P0L9 805 aa11.02□□□□□ -0.65
RFC1-214ENST00000512726 DMGDHQ9UI17 866 aaKnown RBP11.02□□□□□ -0.65
RFC1-214ENST00000512726 FOXD3Q9UJU5 478 aaPredicted RBP11.02□□□□□ -0.65
RFC1-214ENST00000512726 DNAJA1P31689 397 aaKnown RBP11.01□□□□□ -0.65
RFC1-214ENST00000512726 GTF2F1P35269 517 aaKnown RBP eCLIP11.01□□□□□ -0.65
RFC1-214ENST00000512726 ARID5AQ03989 594 aa11.01□□□□□ -0.65
RFC1-214ENST00000512726 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
RFC1-214ENST00000512726 HSH2DQ96JZ2 352 aa11.01□□□□□ -0.65
RFC1-214ENST00000512726 CUEDC1Q9NWM3 386 aaPredicted RBP11.01□□□□□ -0.65
RFC1-214ENST00000512726 GGT7Q9UJ14 662 aa11.01□□□□□ -0.65
RFC1-214ENST00000512726 USP31Q70CQ4 1352 aa11.01□□□□□ -0.65
RFC1-214ENST00000512726 SPATA31C2B4DYI2 1134 aa11□□□□□ -0.65
RFC1-214ENST00000512726 UBAP1LF5GYI3 381 aa11□□□□□ -0.65
RFC1-214ENST00000512726 PHACTR2O75167 634 aa11□□□□□ -0.65
RFC1-214ENST00000512726 PHKA2P46019 1235 aa11□□□□□ -0.65
RFC1-214ENST00000512726 TAF1CQ15572 869 aaPredicted RBP11□□□□□ -0.65
RFC1-214ENST00000512726 ZNF394Q53GI3 561 aa11□□□□□ -0.65
RFC1-214ENST00000512726 USPL1Q5W0Q7 1092 aa11□□□□□ -0.65
RFC1-214ENST00000512726 VPS37DQ86XT2 251 aa11□□□□□ -0.65
RFC1-214ENST00000512726 EPS8L3Q8TE67 593 aaKnown RBP11□□□□□ -0.65
RFC1-214ENST00000512726 DHX38Q92620 1227 aaKnown RBP11□□□□□ -0.65
RFC1-214ENST00000512726 INSM2Q96T92 566 aaPredicted RBP11□□□□□ -0.65
RFC1-214ENST00000512726 OSBPL7Q9BZF2 842 aa11□□□□□ -0.65
RFC1-214ENST00000512726 ZFYVE28Q9HCC9 887 aa11□□□□□ -0.65
RFC1-214ENST00000512726 FAM8A1Q9UBU6 413 aa11□□□□□ -0.65
RFC1-214ENST00000512726 RTCBQ9Y3I0 505 aaKnown RBP11□□□□□ -0.65
RFC1-214ENST00000512726 J3QL48 77 aa10.99□□□□□ -0.65
RFC1-214ENST00000512726 INPP5BP32019 993 aa10.99□□□□□ -0.65
RFC1-214ENST00000512726 PI16Q6UXB8 463 aa10.99□□□□□ -0.65
RFC1-214ENST00000512726 CYP4X1Q8N118 509 aa10.99□□□□□ -0.65
RFC1-214ENST00000512726 CMTR1Q8N1G2 835 aaKnown RBP10.99□□□□□ -0.65
RFC1-214ENST00000512726 SRCIN1Q9C0H9 1055 aa10.99□□□□□ -0.65
RFC1-214ENST00000512726 POLMQ9NP87 494 aaPredicted RBP10.99□□□□□ -0.65
RFC1-214ENST00000512726 PCDHGB7Q9Y5F8 929 aa10.99□□□□□ -0.65
RFC1-214ENST00000512726 RACK1P63244 317 aaKnown RBP10.98□□□□□ -0.65
RFC1-214ENST00000512726 BTLAQ7Z6A9 289 aa10.98□□□□□ -0.65
RFC1-214ENST00000512726 ELP3Q9H9T3 547 aa10.98□□□□□ -0.65
RFC1-214ENST00000512726 SPINT1O43278 529 aa10.97□□□□□ -0.65
RFC1-214ENST00000512726 EPB42P16452 691 aa10.97□□□□□ -0.65
RFC1-214ENST00000512726 CDK11BP21127 795 aaKnown RBP10.97□□□□□ -0.65
RFC1-214ENST00000512726 IRS1P35568 1242 aa10.97□□□□□ -0.65
RFC1-214ENST00000512726 ST13P50502 369 aaKnown RBP10.97□□□□□ -0.65
RFC1-214ENST00000512726 NOP9Q86U38 636 aaKnown RBP10.97□□□□□ -0.65
RFC1-214ENST00000512726 SRA1Q9HD15 236 aaKnown RBP10.97□□□□□ -0.65
RFC1-214ENST00000512726 CDK11AQ9UQ88 783 aaPredicted RBP10.97□□□□□ -0.65
RFC1-214ENST00000512726 USP20Q9Y2K6 914 aa10.97□□□□□ -0.65
RFC1-214ENST00000512726 CADPSQ9ULU8 1353 aa10.97□□□□□ -0.65
RFC1-214ENST00000512726 UPP2O95045 317 aa10.96□□□□□ -0.65
RFC1-214ENST00000512726 TRIP4Q15650 581 aaPredicted RBP10.96□□□□□ -0.65
RFC1-214ENST00000512726 LNPKQ9C0E8 428 aa10.96□□□□□ -0.65
RFC1-214ENST00000512726 USP17L7P0C7H9 530 aa10.95□□□□□ -0.66
RFC1-214ENST00000512726 ARSJQ5FYB0 599 aaPredicted RBP10.95□□□□□ -0.66
RFC1-214ENST00000512726 WDR44Q5JSH3 913 aa10.95□□□□□ -0.66
RFC1-214ENST00000512726 IFFO2Q5TF58 517 aa10.95□□□□□ -0.66
RFC1-214ENST00000512726 MEI1Q5TIA1 1274 aa10.95□□□□□ -0.66
RFC1-214ENST00000512726 KCNMB2Q9Y691 235 aa10.95□□□□□ -0.66
RFC1-214ENST00000512726 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
RFC1-214ENST00000512726 SOGA3Q5TF21 947 aa10.94□□□□□ -0.66
RFC1-214ENST00000512726 GIMAP6Q6P9H5 292 aa10.94□□□□□ -0.66
RFC1-214ENST00000512726 KLRG1Q96E93 195 aa10.94□□□□□ -0.66
RFC1-214ENST00000512726 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
RFC1-214ENST00000512726 ATP4AP20648 1035 aa10.93□□□□□ -0.66
RFC1-214ENST00000512726 CTSOP43234 321 aaPredicted RBP10.93□□□□□ -0.66
RFC1-214ENST00000512726 POU4F2Q12837 409 aa10.93□□□□□ -0.66
RFC1-214ENST00000512726 NXPE4Q6UWF7 544 aa10.93□□□□□ -0.66
RFC1-214ENST00000512726 LRRC69Q6ZNQ3 347 aa10.93□□□□□ -0.66
RFC1-214ENST00000512726 ZIC5Q96T25 663 aa10.93□□□□□ -0.66
RFC1-214ENST00000512726 HIRIP3Q9BW71 556 aaPredicted RBP10.93□□□□□ -0.66
RFC1-214ENST00000512726 BCO2Q9BYV7 579 aa10.93□□□□□ -0.66
RFC1-214ENST00000512726 TMEM63CQ9P1W3 806 aa10.93□□□□□ -0.66
RFC1-214ENST00000512726 GALNT12Q8IXK2 581 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms