RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 CFAP44Q96MT7 982 aa15.7■□□□□ 0.1
CDK7-208ENST00000512687 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
CDK7-208ENST00000512687 SNED1Q8TER0 1413 aa15.69■□□□□ 0.1
CDK7-208ENST00000512687 OLFM4Q6UX06 510 aa15.69■□□□□ 0.1
CDK7-208ENST00000512687 XAGE3Q8WTP9 111 aa15.69■□□□□ 0.1
CDK7-208ENST00000512687 NYXQ9GZU5 481 aa15.69■□□□□ 0.1
CDK7-208ENST00000512687 CHPF2Q9P2E5 772 aa15.69■□□□□ 0.1
CDK7-208ENST00000512687 LTBP3Q9NS15 1303 aa15.68■□□□□ 0.1
CDK7-208ENST00000512687 ZC3H4Q9UPT8 1303 aaKnown RBP15.68■□□□□ 0.1
CDK7-208ENST00000512687 CEP350Q5VT06 3117 aa15.68■□□□□ 0.1
CDK7-208ENST00000512687 AIMP1Q12904 312 aaKnown RBP15.68■□□□□ 0.1
CDK7-208ENST00000512687 CRY2Q49AN0 593 aa15.68■□□□□ 0.1
CDK7-208ENST00000512687 C3orf67Q6ZVT6 689 aa15.68■□□□□ 0.1
CDK7-208ENST00000512687 COPS6Q7L5N1 327 aa15.68■□□□□ 0.1
CDK7-208ENST00000512687 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
CDK7-208ENST00000512687 GTF2E1P29083 439 aaPredicted RBP15.67■□□□□ 0.1
CDK7-208ENST00000512687 HDGFL1Q5TGJ6 251 aa15.67■□□□□ 0.1
CDK7-208ENST00000512687 SLC51AQ86UW1 340 aa15.67■□□□□ 0.1
CDK7-208ENST00000512687 KDM2BQ8NHM5 1336 aa15.67■□□□□ 0.1
CDK7-208ENST00000512687 CACNA1FO60840 1977 aa15.66■□□□□ 0.1
CDK7-208ENST00000512687 HOXB7P09629 217 aa15.66■□□□□ 0.1
CDK7-208ENST00000512687 DUSP27Q5VZP5 1158 aa15.66■□□□□ 0.1
CDK7-208ENST00000512687 TAOK3Q9H2K8 898 aa15.66■□□□□ 0.1
CDK7-208ENST00000512687 RRAGCQ9HB90 399 aa15.66■□□□□ 0.1
CDK7-208ENST00000512687 IFT57Q9NWB7 429 aa15.66■□□□□ 0.1
CDK7-208ENST00000512687 COL4A5P29400 1685 aa15.66■□□□□ 0.1
CDK7-208ENST00000512687 LRRC37AA6NMS7 1700 aa15.65■□□□□ 0.1
CDK7-208ENST00000512687 COL4A1P02462 1669 aa15.65■□□□□ 0.1
CDK7-208ENST00000512687 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
CDK7-208ENST00000512687 ABCB7O75027 752 aa15.65■□□□□ 0.1
CDK7-208ENST00000512687 HSPA6P17066 643 aa15.65■□□□□ 0.1
CDK7-208ENST00000512687 PARP10Q53GL7 1025 aa15.65■□□□□ 0.1
CDK7-208ENST00000512687 CCDC93Q567U6 631 aa15.65■□□□□ 0.1
CDK7-208ENST00000512687 SCN4AP35499 1836 aa15.65■□□□□ 0.1
CDK7-208ENST00000512687 TOMM70O94826 608 aa15.64■□□□□ 0.09
CDK7-208ENST00000512687 SOGA3Q5TF21 947 aa15.64■□□□□ 0.09
CDK7-208ENST00000512687 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
CDK7-208ENST00000512687 MYH3P11055 1940 aa15.64■□□□□ 0.09
CDK7-208ENST00000512687 GNAI1P63096 354 aa15.63■□□□□ 0.09
CDK7-208ENST00000512687 NLRP10Q86W26 655 aa15.63■□□□□ 0.09
CDK7-208ENST00000512687 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
CDK7-208ENST00000512687 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
CDK7-208ENST00000512687 SPEF2Q9C093 1822 aa15.62■□□□□ 0.09
CDK7-208ENST00000512687 POTECB2RU33 542 aa15.62■□□□□ 0.09
CDK7-208ENST00000512687 ELL2O00472 640 aaPredicted RBP15.62■□□□□ 0.09
CDK7-208ENST00000512687 HOXA10P31260 410 aaPredicted RBP15.62■□□□□ 0.09
CDK7-208ENST00000512687 FKBP4Q02790 459 aaKnown RBP eCLIP15.62■□□□□ 0.09
CDK7-208ENST00000512687 TCIRG1Q13488 830 aa15.62■□□□□ 0.09
CDK7-208ENST00000512687 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
CDK7-208ENST00000512687 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
CDK7-208ENST00000512687 UTP14AQ9BVJ6 771 aaKnown RBP15.62■□□□□ 0.09
CDK7-208ENST00000512687 MRS2Q9HD23 443 aa15.62■□□□□ 0.09
CDK7-208ENST00000512687 DBF4Q9UBU7 674 aaPredicted RBP15.62■□□□□ 0.09
CDK7-208ENST00000512687 ANP32CO43423 234 aa15.61■□□□□ 0.09
CDK7-208ENST00000512687 ALDH1B1P30837 517 aa15.61■□□□□ 0.09
CDK7-208ENST00000512687 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
CDK7-208ENST00000512687 CALD1Q05682 793 aaKnown RBP15.61■□□□□ 0.09
CDK7-208ENST00000512687 HSP90AB3PQ58FF7 597 aa15.61■□□□□ 0.09
CDK7-208ENST00000512687 PLBD2Q8NHP8 589 aa15.61■□□□□ 0.09
CDK7-208ENST00000512687 RPGRQ92834 1020 aaKnown RBP15.61■□□□□ 0.09
CDK7-208ENST00000512687 ZNF277Q9NRM2 450 aaPredicted RBP15.61■□□□□ 0.09
CDK7-208ENST00000512687 DSG3P32926 999 aa15.6■□□□□ 0.09
CDK7-208ENST00000512687 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
CDK7-208ENST00000512687 SLC10A5Q5PT55 438 aa15.6■□□□□ 0.09
CDK7-208ENST00000512687 TSPYL6Q8N831 410 aa15.6■□□□□ 0.09
CDK7-208ENST00000512687 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
CDK7-208ENST00000512687 PHAXQ9H814 394 aaKnown RBP15.6■□□□□ 0.09
CDK7-208ENST00000512687 RNF123Q5XPI4 1314 aa15.6■□□□□ 0.09
CDK7-208ENST00000512687 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
CDK7-208ENST00000512687 ADAMTSL1Q8N6G6 1762 aa15.59■□□□□ 0.09
CDK7-208ENST00000512687 HCLS1P14317 486 aaPredicted RBP15.59■□□□□ 0.09
CDK7-208ENST00000512687 CCDC27Q2M243 656 aa15.59■□□□□ 0.09
CDK7-208ENST00000512687 WWC1Q8IX03 1113 aa15.59■□□□□ 0.09
CDK7-208ENST00000512687 C16orf71Q8IYS4 520 aaPredicted RBP15.59■□□□□ 0.09
CDK7-208ENST00000512687 CRAMP1Q96RY5 1269 aa15.59■□□□□ 0.09
CDK7-208ENST00000512687 ISCA1Q9BUE6 129 aa15.59■□□□□ 0.09
CDK7-208ENST00000512687 HYPKQ9NX55 129 aa15.59■□□□□ 0.09
CDK7-208ENST00000512687 ZNF541Q9H0D2 1346 aa15.59■□□□□ 0.09
CDK7-208ENST00000512687 DUOX1Q9NRD9 1551 aa15.58■□□□□ 0.09
CDK7-208ENST00000512687 PPEF1O14829 653 aaPredicted RBP15.58■□□□□ 0.08
CDK7-208ENST00000512687 DDNO94850 711 aaPredicted RBP15.58■□□□□ 0.08
CDK7-208ENST00000512687 ANKRD13DQ6ZTN6 518 aa15.58■□□□□ 0.08
CDK7-208ENST00000512687 RTKN2Q8IZC4 609 aa15.58■□□□□ 0.08
CDK7-208ENST00000512687 RBM17Q96I25 401 aaKnown RBP15.58■□□□□ 0.08
CDK7-208ENST00000512687 NLRP3Q96P20 1036 aa15.58■□□□□ 0.08
CDK7-208ENST00000512687 TRMT112Q9UI30 125 aaKnown RBP15.58■□□□□ 0.08
CDK7-208ENST00000512687 ABCC4O15439 1325 aa15.58■□□□□ 0.08
CDK7-208ENST00000512687 ATP5J2-PTCD1G3V325 749 aa15.57■□□□□ 0.08
CDK7-208ENST00000512687 TCERG1O14776 1098 aaKnown RBP15.57■□□□□ 0.08
CDK7-208ENST00000512687 VEGFAP15692 232 aaPredicted RBP15.57■□□□□ 0.08
CDK7-208ENST00000512687 IARSP41252 1262 aaKnown RBP15.57■□□□□ 0.08
CDK7-208ENST00000512687 PSMD1Q99460 953 aa15.57■□□□□ 0.08
CDK7-208ENST00000512687 SH3TC1Q8TE82 1336 aa15.57■□□□□ 0.08
CDK7-208ENST00000512687 FSTL1Q12841 308 aa15.56■□□□□ 0.08
CDK7-208ENST00000512687 DPY19L2Q6NUT2 758 aa15.56■□□□□ 0.08
CDK7-208ENST00000512687 FAM89AQ96GI7 184 aa15.55■□□□□ 0.08
CDK7-208ENST00000512687 IL16Q14005 1332 aa15.54■□□□□ 0.08
CDK7-208ENST00000512687 APLP1P51693 650 aa15.54■□□□□ 0.08
CDK7-208ENST00000512687 HTRA3P83110 453 aa15.54■□□□□ 0.08
CDK7-208ENST00000512687 CC2D2BQ6DHV5 1058 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms