RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 PDE6BP35913 854 aa20.09■□□□□ 0.81
SGCA-208ENST00000512526 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
SGCA-208ENST00000512526 RNF123Q5XPI4 1314 aa20.08■□□□□ 0.81
SGCA-208ENST00000512526 PXDNLA1KZ92 1463 aa20.08■□□□□ 0.81
SGCA-208ENST00000512526 NEURL1BA8MQ27 555 aa20.08■□□□□ 0.81
SGCA-208ENST00000512526 BCAR3O75815 825 aa20.08■□□□□ 0.81
SGCA-208ENST00000512526 CHRNA5P30532 468 aa20.08■□□□□ 0.81
SGCA-208ENST00000512526 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.81
SGCA-208ENST00000512526 BEND3Q5T5X7 828 aa20.08■□□□□ 0.81
SGCA-208ENST00000512526 LINS1Q8NG48 757 aa20.08■□□□□ 0.81
SGCA-208ENST00000512526 CWC25Q9NXE8 425 aaPredicted RBP20.08■□□□□ 0.81
SGCA-208ENST00000512526 NOB1Q9ULX3 412 aaKnown RBP20.08■□□□□ 0.81
SGCA-208ENST00000512526 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.81
SGCA-208ENST00000512526 CWF19L2Q2TBE0 894 aaKnown RBP20.07■□□□□ 0.8
SGCA-208ENST00000512526 C2CD5Q86YS7 1000 aa20.07■□□□□ 0.8
SGCA-208ENST00000512526 ZBTB38Q8NAP3 1195 aaPredicted RBP20.07■□□□□ 0.8
SGCA-208ENST00000512526 FAM89AQ96GI7 184 aa20.07■□□□□ 0.8
SGCA-208ENST00000512526 ABCC12Q96J65 1359 aa20.07■□□□□ 0.8
SGCA-208ENST00000512526 NUP98P52948 1817 aa20.06■□□□□ 0.8
SGCA-208ENST00000512526 SH3TC1Q8TE82 1336 aa20.06■□□□□ 0.8
SGCA-208ENST00000512526 H0YIN7 160 aa20.06■□□□□ 0.8
SGCA-208ENST00000512526 ARHGAP45Q92619 1136 aa20.06■□□□□ 0.8
SGCA-208ENST00000512526 PCCAP05165 728 aaPredicted RBP20.05■□□□□ 0.8
SGCA-208ENST00000512526 SRGNP10124 158 aa20.05■□□□□ 0.8
SGCA-208ENST00000512526 CRY2Q49AN0 593 aa20.05■□□□□ 0.8
SGCA-208ENST00000512526 RIC1Q4ADV7 1423 aa20.04■□□□□ 0.8
SGCA-208ENST00000512526 HCLS1P14317 486 aaPredicted RBP20.04■□□□□ 0.8
SGCA-208ENST00000512526 GCKRQ14397 625 aa20.04■□□□□ 0.8
SGCA-208ENST00000512526 C3orf67Q6ZVT6 689 aa20.04■□□□□ 0.8
SGCA-208ENST00000512526 PIM2Q9P1W9 311 aa20.04■□□□□ 0.8
SGCA-208ENST00000512526 H7C1W4 665 aa20.03■□□□□ 0.8
SGCA-208ENST00000512526 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
SGCA-208ENST00000512526 NLRP3Q96P20 1036 aa20.03■□□□□ 0.8
SGCA-208ENST00000512526 AFDNP55196 1824 aaKnown RBP20.03■□□□□ 0.8
SGCA-208ENST00000512526 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
SGCA-208ENST00000512526 IRS4O14654 1257 aaPredicted RBP20.02■□□□□ 0.8
SGCA-208ENST00000512526 YBX3P16989 372 aaKnown RBP eCLIP20.02■□□□□ 0.8
SGCA-208ENST00000512526 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.8
SGCA-208ENST00000512526 STYK1Q6J9G0 422 aa20.02■□□□□ 0.8
SGCA-208ENST00000512526 JARID2Q92833 1246 aaPredicted RBP20.02■□□□□ 0.8
SGCA-208ENST00000512526 MASTLQ96GX5 879 aa20.02■□□□□ 0.8
SGCA-208ENST00000512526 KIF16BQ96L93 1317 aa20.02■□□□□ 0.79
SGCA-208ENST00000512526 IPO8O15397 1037 aaKnown RBP20.01■□□□□ 0.79
SGCA-208ENST00000512526 ALDH1L1O75891 902 aa20.01■□□□□ 0.79
SGCA-208ENST00000512526 NPR1P16066 1061 aa20.01■□□□□ 0.79
SGCA-208ENST00000512526 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
SGCA-208ENST00000512526 CASP7P55210 303 aa20.01■□□□□ 0.79
SGCA-208ENST00000512526 API5Q9BZZ5 524 aaKnown RBP20.01■□□□□ 0.79
SGCA-208ENST00000512526 SRCIN1Q9C0H9 1055 aa20.01■□□□□ 0.79
SGCA-208ENST00000512526 ARFGEF2Q9Y6D5 1785 aa20■□□□□ 0.79
SGCA-208ENST00000512526 DALRD3Q5D0E6 543 aaKnown RBP20■□□□□ 0.79
SGCA-208ENST00000512526 ZNF622Q969S3 477 aaKnown RBP eCLIP20■□□□□ 0.79
SGCA-208ENST00000512526 WWC3Q9ULE0 1092 aa20■□□□□ 0.79
SGCA-208ENST00000512526 CDHR2Q9BYE9 1310 aa20■□□□□ 0.79
SGCA-208ENST00000512526 SF3B3Q15393 1217 aaKnown RBP19.99■□□□□ 0.79
SGCA-208ENST00000512526 GPR162Q16538 588 aa19.99■□□□□ 0.79
SGCA-208ENST00000512526 TTLL6Q8N841 843 aa19.99■□□□□ 0.79
SGCA-208ENST00000512526 CACNA1FO60840 1977 aa19.99■□□□□ 0.79
SGCA-208ENST00000512526 TRIM27P14373 513 aa19.98■□□□□ 0.79
SGCA-208ENST00000512526 ATF7IPQ6VMQ6 1270 aa19.98■□□□□ 0.79
SGCA-208ENST00000512526 FRAT1Q92837 279 aaPredicted RBP19.98■□□□□ 0.79
SGCA-208ENST00000512526 CNKSR1Q969H4 720 aa19.98■□□□□ 0.79
SGCA-208ENST00000512526 RCAN3Q9UKA8 241 aa19.98■□□□□ 0.79
SGCA-208ENST00000512526 BCS1LQ9Y276 419 aa19.98■□□□□ 0.79
SGCA-208ENST00000512526 GOLGB1Q14789 3259 aaKnown RBP19.98■□□□□ 0.79
SGCA-208ENST00000512526 KIAA1551Q9HCM1 1747 aa19.98■□□□□ 0.79
SGCA-208ENST00000512526 PDE8AO60658 829 aa19.97■□□□□ 0.79
SGCA-208ENST00000512526 HSP90B1P14625 803 aaKnown RBP19.97■□□□□ 0.79
SGCA-208ENST00000512526 UBE3BQ7Z3V4 1068 aa19.97■□□□□ 0.79
SGCA-208ENST00000512526 ANKRD36CQ5JPF3 1778 aa19.96■□□□□ 0.79
SGCA-208ENST00000512526 GRM8O00222 908 aa19.96■□□□□ 0.79
SGCA-208ENST00000512526 ALDH1B1P30837 517 aa19.96■□□□□ 0.79
SGCA-208ENST00000512526 CCT4P50991 539 aaKnown RBP19.96■□□□□ 0.79
SGCA-208ENST00000512526 ZKSCAN2Q63HK3 967 aa19.96■□□□□ 0.79
SGCA-208ENST00000512526 PELP1Q8IZL8 1130 aaKnown RBP19.96■□□□□ 0.79
SGCA-208ENST00000512526 C7orf43Q8WVR3 580 aa19.96■□□□□ 0.79
SGCA-208ENST00000512526 CRAMP1Q96RY5 1269 aa19.96■□□□□ 0.79
SGCA-208ENST00000512526 PLA2G12BQ9BX93 195 aa19.96■□□□□ 0.79
SGCA-208ENST00000512526 TNNQ9UQP3 1299 aa19.96■□□□□ 0.79
SGCA-208ENST00000512526 UTYO14607 1347 aa19.96■□□□□ 0.79
SGCA-208ENST00000512526 ANKRD31Q8N7Z5 1873 aa19.95■□□□□ 0.78
SGCA-208ENST00000512526 INTS3Q68E01 1043 aaKnown RBP19.95■□□□□ 0.78
SGCA-208ENST00000512526 RPGRQ92834 1020 aaKnown RBP19.95■□□□□ 0.78
SGCA-208ENST00000512526 RBM17Q96I25 401 aaKnown RBP19.95■□□□□ 0.78
SGCA-208ENST00000512526 USP44Q9H0E7 712 aa19.95■□□□□ 0.78
SGCA-208ENST00000512526 ABCC4O15439 1325 aa19.95■□□□□ 0.78
SGCA-208ENST00000512526 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
SGCA-208ENST00000512526 GRIN3BO60391 1043 aa19.94■□□□□ 0.78
SGCA-208ENST00000512526 YY1P25490 414 aa19.94■□□□□ 0.78
SGCA-208ENST00000512526 PRPF40BQ6NWY9 871 aaKnown RBP19.94■□□□□ 0.78
SGCA-208ENST00000512526 C9orf78Q9NZ63 289 aaPredicted RBP19.94■□□□□ 0.78
SGCA-208ENST00000512526 UTRNP46939 3433 aa19.93■□□□□ 0.78
SGCA-208ENST00000512526 NBPF7P0C2Y1 421 aaPredicted RBP19.93■□□□□ 0.78
SGCA-208ENST00000512526 TTLL11Q8NHH1 800 aa19.93■□□□□ 0.78
SGCA-208ENST00000512526 CSF1RP07333 972 aa19.92■□□□□ 0.78
SGCA-208ENST00000512526 CTSWP56202 376 aa19.92■□□□□ 0.78
SGCA-208ENST00000512526 FOXO4P98177 505 aa19.92■□□□□ 0.78
SGCA-208ENST00000512526 N4BP2Q86UW6 1770 aaPredicted RBP19.92■□□□□ 0.78
SGCA-208ENST00000512526 TNRC6CQ9HCJ0 1690 aaKnown RBP19.91■□□□□ 0.78
SGCA-208ENST00000512526 CCDC152Q4G0S7 254 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms