RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 DLK2Q6UY11 383 aa9.04□□□□□ -0.96
CLDND1-225ENST00000512147 R3HDMLQ9H3Y0 253 aa9.04□□□□□ -0.96
CLDND1-225ENST00000512147 EFCC1Q9HA90 598 aa9.04□□□□□ -0.96
CLDND1-225ENST00000512147 NRXN2Q9P2S2 1712 aa9.04□□□□□ -0.96
CLDND1-225ENST00000512147 MON2Q7Z3U7 1717 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 POTEB2H3BUK9 544 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 SRGNP10124 158 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 NBPF6Q5VWK0 638 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 KRT26Q7Z3Y9 468 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 TDHQ8IZJ6 230 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 NBPF4Q96M43 638 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 GDF15Q99988 308 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 LRFN3Q9BTN0 628 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 CHD8Q9HCK8 2581 aa9.03□□□□□ -0.96
CLDND1-225ENST00000512147 BDP1A6H8Y1 2624 aa9.02□□□□□ -0.96
CLDND1-225ENST00000512147 MUC3AQ02505 3323 aa9.02□□□□□ -0.97
CLDND1-225ENST00000512147 ALDH1A1P00352 501 aa9.02□□□□□ -0.97
CLDND1-225ENST00000512147 HIRAP54198 1017 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-225ENST00000512147 SREBF2Q12772 1141 aa9.02□□□□□ -0.97
CLDND1-225ENST00000512147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLDND1-225ENST00000512147 USHBP1Q8N6Y0 703 aa9.02□□□□□ -0.97
CLDND1-225ENST00000512147 KIF7Q2M1P5 1343 aa9.02□□□□□ -0.97
CLDND1-225ENST00000512147 MYH14Q7Z406 1995 aaKnown RBP9.01□□□□□ -0.97
CLDND1-225ENST00000512147 NPHP1O15259 732 aa9.01□□□□□ -0.97
CLDND1-225ENST00000512147 CACNA1BQ00975 2339 aa9.01□□□□□ -0.97
CLDND1-225ENST00000512147 NKX2-3Q8TAU0 364 aa9.01□□□□□ -0.97
CLDND1-225ENST00000512147 CDX2Q99626 313 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-225ENST00000512147 NARFQ9UHQ1 456 aa9.01□□□□□ -0.97
CLDND1-225ENST00000512147 BCORQ6W2J9 1755 aa9.01□□□□□ -0.97
CLDND1-225ENST00000512147 LAMA2P24043 3122 aaKnown RBP9□□□□□ -0.97
CLDND1-225ENST00000512147 AMPHP49418 695 aa9□□□□□ -0.97
CLDND1-225ENST00000512147 LARGE2Q8N3Y3 721 aa9□□□□□ -0.97
CLDND1-225ENST00000512147 CACNA1SQ13698 1873 aa9□□□□□ -0.97
CLDND1-225ENST00000512147 COL5A3P25940 1745 aaPredicted RBP9□□□□□ -0.97
CLDND1-225ENST00000512147 KTN1Q86UP2 1357 aaKnown RBP8.99□□□□□ -0.97
CLDND1-225ENST00000512147 ZNF697Q5TEC3 545 aa8.99□□□□□ -0.97
CLDND1-225ENST00000512147 CD99L2Q8TCZ2 262 aa8.99□□□□□ -0.97
CLDND1-225ENST00000512147 ADAMTS19Q8TE59 1207 aa8.99□□□□□ -0.97
CLDND1-225ENST00000512147 UHRF1Q96T88 793 aaPredicted RBP8.99□□□□□ -0.97
CLDND1-225ENST00000512147 PSMD1Q99460 953 aa8.99□□□□□ -0.97
CLDND1-225ENST00000512147 ZNF831Q5JPB2 1677 aa8.99□□□□□ -0.97
CLDND1-225ENST00000512147 HTTP42858 3142 aa8.99□□□□□ -0.97
CLDND1-225ENST00000512147 HOXC9P31274 260 aa8.98□□□□□ -0.97
CLDND1-225ENST00000512147 GMPSP49915 693 aaPredicted RBP8.98□□□□□ -0.97
CLDND1-225ENST00000512147 ARHGEF6Q15052 776 aa8.98□□□□□ -0.97
CLDND1-225ENST00000512147 TMEM31Q5JXX7 168 aa8.98□□□□□ -0.97
CLDND1-225ENST00000512147 PRR5LQ6MZQ0 368 aa8.98□□□□□ -0.97
CLDND1-225ENST00000512147 OLFM4Q6UX06 510 aa8.98□□□□□ -0.97
CLDND1-225ENST00000512147 NME9Q86XW9 330 aa8.98□□□□□ -0.97
CLDND1-225ENST00000512147 DCPSQ96C86 337 aaKnown RBP8.98□□□□□ -0.97
CLDND1-225ENST00000512147 BCL2L13Q9BXK5 485 aa8.98□□□□□ -0.97
CLDND1-225ENST00000512147 SPG7Q9UQ90 795 aa8.98□□□□□ -0.97
CLDND1-225ENST00000512147 CENPFP49454 3210 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 FKBP1BP68106 108 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 MAP3K11Q16584 847 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 INTS5Q6P9B9 1019 aaKnown RBP8.97□□□□□ -0.97
CLDND1-225ENST00000512147 UBE2Q1Q7Z7E8 422 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 NIM1KQ8IY84 436 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 TRPM4Q8TD43 1214 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 SHISA4Q96DD7 197 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 BCL2L12Q9HB09 334 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 KDM2AQ9Y2K7 1162 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 CDHR2Q9BYE9 1310 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 COL11A2P13942 1736 aaPredicted RBP8.97□□□□□ -0.97
CLDND1-225ENST00000512147 ZDBF2Q9HCK1 2354 aa8.97□□□□□ -0.97
CLDND1-225ENST00000512147 ANKRD31Q8N7Z5 1873 aa8.96□□□□□ -0.97
CLDND1-225ENST00000512147 ADM5C9JUS6 153 aa8.96□□□□□ -0.98
CLDND1-225ENST00000512147 H7C1D1 291 aa8.96□□□□□ -0.98
CLDND1-225ENST00000512147 RGL2O15211 777 aa8.96□□□□□ -0.98
CLDND1-225ENST00000512147 PTCD1O75127 700 aaKnown RBP8.96□□□□□ -0.98
CLDND1-225ENST00000512147 UBE2OQ9C0C9 1292 aaKnown RBP8.96□□□□□ -0.98
CLDND1-225ENST00000512147 PTCH2Q9Y6C5 1203 aa8.96□□□□□ -0.98
CLDND1-225ENST00000512147 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.98
CLDND1-225ENST00000512147 MRC1P22897 1456 aa8.96□□□□□ -0.98
CLDND1-225ENST00000512147 FOSL2P15408 326 aa8.95□□□□□ -0.98
CLDND1-225ENST00000512147 NPR1P16066 1061 aa8.95□□□□□ -0.98
CLDND1-225ENST00000512147 ST5P78524 1137 aa8.95□□□□□ -0.98
CLDND1-225ENST00000512147 CNBD1Q8NA66 436 aa8.95□□□□□ -0.98
CLDND1-225ENST00000512147 IL27Q8NEV9 243 aa8.95□□□□□ -0.98
CLDND1-225ENST00000512147 ZBTB12Q9Y330 459 aaPredicted RBP8.95□□□□□ -0.98
CLDND1-225ENST00000512147 ZNF609O15014 1411 aa8.95□□□□□ -0.98
CLDND1-225ENST00000512147 ARFGEF2Q9Y6D5 1785 aa8.94□□□□□ -0.98
CLDND1-225ENST00000512147 KRT37O76014 449 aa8.94□□□□□ -0.98
CLDND1-225ENST00000512147 ECM2O94769 699 aaPredicted RBP8.94□□□□□ -0.98
CLDND1-225ENST00000512147 MKRN3Q13064 507 aaKnown RBP8.94□□□□□ -0.98
CLDND1-225ENST00000512147 SULF1Q8IWU6 871 aa8.94□□□□□ -0.98
CLDND1-225ENST00000512147 CCER1Q8TC90 406 aaPredicted RBP8.94□□□□□ -0.98
CLDND1-225ENST00000512147 SH3TC2Q8TF17 1288 aa8.94□□□□□ -0.98
CLDND1-225ENST00000512147 ATXN2LQ8WWM7 1075 aaKnown RBP8.94□□□□□ -0.98
CLDND1-225ENST00000512147 MYLIPQ8WY64 445 aa8.94□□□□□ -0.98
CLDND1-225ENST00000512147 SIN3AQ96ST3 1273 aa8.94□□□□□ -0.98
CLDND1-225ENST00000512147 CNOT7Q9UIV1 285 aaKnown RBP8.94□□□□□ -0.98
CLDND1-225ENST00000512147 WASHC2AQ641Q2 1341 aa8.94□□□□□ -0.98
CLDND1-225ENST00000512147 UNC79Q9P2D8 2635 aa8.94□□□□□ -0.98
CLDND1-225ENST00000512147 FARP2O94887 1054 aaPredicted RBP8.93□□□□□ -0.98
CLDND1-225ENST00000512147 GJA8P48165 433 aa8.93□□□□□ -0.98
CLDND1-225ENST00000512147 SP3Q02447 781 aa8.93□□□□□ -0.98
CLDND1-225ENST00000512147 CXCL9Q07325 125 aa8.93□□□□□ -0.98
CLDND1-225ENST00000512147 ASB2Q96Q27 587 aa8.93□□□□□ -0.98
CLDND1-225ENST00000512147 SOS1Q07889 1333 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms