RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 GOLGA2Q08379 1002 aa7.68□□□□□ -1.18
RNF4-217ENST00000511892 PRR5LQ6MZQ0 368 aa7.68□□□□□ -1.18
RNF4-217ENST00000511892 C2CD5Q86YS7 1000 aa7.68□□□□□ -1.18
RNF4-217ENST00000511892 CCDC146Q8IYE0 955 aa7.68□□□□□ -1.18
RNF4-217ENST00000511892 CCDC24Q8N4L8 307 aa7.68□□□□□ -1.18
RNF4-217ENST00000511892 PNISRQ8TF01 805 aaKnown RBP7.68□□□□□ -1.18
RNF4-217ENST00000511892 ZNF526Q8TF50 670 aaPredicted RBP7.68□□□□□ -1.18
RNF4-217ENST00000511892 SETDB2Q96T68 719 aa7.68□□□□□ -1.18
RNF4-217ENST00000511892 TNRC6CQ9HCJ0 1690 aaKnown RBP7.67□□□□□ -1.18
RNF4-217ENST00000511892 HLFQ16534 295 aa7.67□□□□□ -1.18
RNF4-217ENST00000511892 CLEC4GQ6UXB4 293 aa7.67□□□□□ -1.18
RNF4-217ENST00000511892 BRIP1Q9BX63 1249 aa7.67□□□□□ -1.18
RNF4-217ENST00000511892 GPBP1L1Q9HC44 474 aaPredicted RBP7.67□□□□□ -1.18
RNF4-217ENST00000511892 ADAMTS8Q9UP79 889 aa7.67□□□□□ -1.18
RNF4-217ENST00000511892 RRP7AQ9Y3A4 280 aaKnown RBP7.67□□□□□ -1.18
RNF4-217ENST00000511892 PCNTO95613 3336 aa7.67□□□□□ -1.18
RNF4-217ENST00000511892 LAMB2P55268 1798 aa7.66□□□□□ -1.18
RNF4-217ENST00000511892 H0YIN7 160 aa7.66□□□□□ -1.18
RNF4-217ENST00000511892 RGL2O15211 777 aa7.66□□□□□ -1.18
RNF4-217ENST00000511892 PRELPP51888 382 aa7.66□□□□□ -1.18
RNF4-217ENST00000511892 MKRN3Q13064 507 aaKnown RBP7.66□□□□□ -1.18
RNF4-217ENST00000511892 NEUROD2Q15784 382 aa7.66□□□□□ -1.18
RNF4-217ENST00000511892 C9orf131Q5VYM1 1079 aa7.66□□□□□ -1.18
RNF4-217ENST00000511892 NPM2Q86SE8 214 aaKnown RBP7.66□□□□□ -1.18
RNF4-217ENST00000511892 TTLL6Q8N841 843 aa7.66□□□□□ -1.18
RNF4-217ENST00000511892 RUNDC1Q96C34 613 aa7.66□□□□□ -1.18
RNF4-217ENST00000511892 TSPYL4Q9UJ04 414 aa7.66□□□□□ -1.18
RNF4-217ENST00000511892 KIF3CO14782 793 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 TAF1P21675 1872 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 PDE6BP35913 854 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 RASSF7Q02833 373 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 WDR43Q15061 677 aaKnown RBP eCLIP7.65□□□□□ -1.18
RNF4-217ENST00000511892 PDIA6Q15084 440 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 TTLL7Q6ZT98 887 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 LRP10Q7Z4F1 713 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 NGEFQ8N5V2 710 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 CNBD1Q8NA66 436 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 BABAM1Q9NWV8 329 aa7.65□□□□□ -1.18
RNF4-217ENST00000511892 MAP3K15Q6ZN16 1313 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 KLRG2A4D1S0 409 aaPredicted RBP7.64□□□□□ -1.19
RNF4-217ENST00000511892 ERVV-1B6SEH8 477 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 CHL1O00533 1208 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 SRGNP10124 158 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 MYL6BP14649 208 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 VASPP50552 380 aaPredicted RBP7.64□□□□□ -1.19
RNF4-217ENST00000511892 ST5P78524 1137 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 LMOD3Q0VAK6 560 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 GSE1Q14687 1217 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 PROSER3Q2NL68 480 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 CCDC184Q52MB2 194 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 NBPF5PQ86XG9 351 aaPredicted RBP7.64□□□□□ -1.19
RNF4-217ENST00000511892 ZNF622Q969S3 477 aaKnown RBP eCLIP7.64□□□□□ -1.19
RNF4-217ENST00000511892 RNF181Q9P0P0 153 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 PDZRN3Q9UPQ7 1066 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 NIP7Q9Y221 180 aaKnown RBP eCLIP7.64□□□□□ -1.19
RNF4-217ENST00000511892 ZNF652Q9Y2D9 606 aa7.64□□□□□ -1.19
RNF4-217ENST00000511892 ERBB4Q15303 1308 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 SENP3-EIF4A1A0A087X0R7 540 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 FAM177BA6PVY3 158 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 NFKBIEO00221 500 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 SNPHO15079 494 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 ANXA1P04083 346 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 KRT24Q2M2I5 525 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 STYK1Q6J9G0 422 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 TPTE2Q6XPS3 522 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 C3orf67Q6ZVT6 689 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 PDCD7Q8N8D1 485 aaKnown RBP7.63□□□□□ -1.19
RNF4-217ENST00000511892 ZBTB3Q9H5J0 574 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 NMRK2Q9NPI5 230 aa7.63□□□□□ -1.19
RNF4-217ENST00000511892 ABCC12Q96J65 1359 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 UBN2Q6ZU65 1347 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 DDX60Q8IY21 1712 aaKnown RBP7.62□□□□□ -1.19
RNF4-217ENST00000511892 APAF1O14727 1248 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 NPHP1O15259 732 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 C21orf2O43822 256 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 EIF2S2P20042 333 aaKnown RBP7.62□□□□□ -1.19
RNF4-217ENST00000511892 PSEN1P49768 467 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 KIF6Q6ZMV9 814 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 ZNF467Q7Z7K2 595 aaPredicted RBP7.62□□□□□ -1.19
RNF4-217ENST00000511892 ZNF34Q8IZ26 560 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 C7orf43Q8WVR3 580 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 CNKSR1Q969H4 720 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 MASTLQ96GX5 879 aa7.62□□□□□ -1.19
RNF4-217ENST00000511892 LAS1LQ9Y4W2 734 aaKnown RBP7.62□□□□□ -1.19
RNF4-217ENST00000511892 WDR90Q96KV7 1748 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 CACNA1FO60840 1977 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 ZNF853P0CG23 659 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 LMNB1P20700 586 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 GPTP24298 496 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 ERFEQ4G0M1 354 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 SUSD4Q5VX71 490 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 DPY19L2Q6NUT2 758 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 PRPF40BQ6NWY9 871 aaKnown RBP7.61□□□□□ -1.19
RNF4-217ENST00000511892 GIGYF2Q6Y7W6 1299 aaKnown RBP7.61□□□□□ -1.19
RNF4-217ENST00000511892 NUTM1Q86Y26 1132 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 SPNS2Q8IVW8 549 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 NECTIN2Q92692 538 aa7.61□□□□□ -1.19
RNF4-217ENST00000511892 IBTKQ9P2D0 1353 aaPredicted RBP7.6□□□□□ -1.19
RNF4-217ENST00000511892 LTBP3Q9NS15 1303 aa7.6□□□□□ -1.19
RNF4-217ENST00000511892 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms