RNA–Protein interactions for RNA: ENST00000511412.1

ALYREF-203, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-203ENST00000511412 HTRA3P83110 453 aa32.21■■■□□ 2.75
ALYREF-203ENST00000511412 SNED1Q8TER0 1413 aa32.2■■■□□ 2.75
ALYREF-203ENST00000511412 KRT24Q2M2I5 525 aa32.2■■■□□ 2.75
ALYREF-203ENST00000511412 HOXA10P31260 410 aaPredicted RBP32.18■■■□□ 2.74
ALYREF-203ENST00000511412 AIMP1Q12904 312 aaKnown RBP32.18■■■□□ 2.74
ALYREF-203ENST00000511412 HSP90AB3PQ58FF7 597 aa32.18■■■□□ 2.74
ALYREF-203ENST00000511412 COPS6Q7L5N1 327 aa32.18■■■□□ 2.74
ALYREF-203ENST00000511412 XAGE3Q8WTP9 111 aa32.18■■■□□ 2.74
ALYREF-203ENST00000511412 DDX21Q9NR30 783 aaKnown RBP eCLIP32.18■■■□□ 2.74
ALYREF-203ENST00000511412 RBM17Q96I25 401 aaKnown RBP32.17■■■□□ 2.74
ALYREF-203ENST00000511412 UTP14AQ9BVJ6 771 aaKnown RBP32.17■■■□□ 2.74
ALYREF-203ENST00000511412 SCN4AP35499 1836 aa32.16■■■□□ 2.74
ALYREF-203ENST00000511412 IARSP41252 1262 aaKnown RBP32.16■■■□□ 2.74
ALYREF-203ENST00000511412 CC2D2BQ6DHV5 1058 aa32.16■■■□□ 2.74
ALYREF-203ENST00000511412 SYNE4Q8N205 404 aa32.16■■■□□ 2.74
ALYREF-203ENST00000511412 PSMD1Q99460 953 aa32.16■■■□□ 2.74
ALYREF-203ENST00000511412 RNF123Q5XPI4 1314 aa32.16■■■□□ 2.74
ALYREF-203ENST00000511412 HOXB7P09629 217 aa32.15■■■□□ 2.74
ALYREF-203ENST00000511412 HDGFL1Q5TGJ6 251 aa32.15■■■□□ 2.74
ALYREF-203ENST00000511412 KLRG1Q96E93 195 aa32.15■■■□□ 2.74
ALYREF-203ENST00000511412 CRAMP1Q96RY5 1269 aa32.15■■■□□ 2.74
ALYREF-203ENST00000511412 IQCA1LA6NCM1 817 aa32.14■■■□□ 2.74
ALYREF-203ENST00000511412 L3MBTL3Q96JM7 780 aaPredicted RBP32.14■■■□□ 2.74
ALYREF-203ENST00000511412 CFAP44Q96MT7 982 aa32.14■■■□□ 2.74
ALYREF-203ENST00000511412 NLRP3Q96P20 1036 aa32.14■■■□□ 2.74
ALYREF-203ENST00000511412 CHPF2Q9P2E5 772 aa32.14■■■□□ 2.74
ALYREF-203ENST00000511412 ZNF541Q9H0D2 1346 aa32.14■■■□□ 2.74
ALYREF-203ENST00000511412 PPEF1O14829 653 aaPredicted RBP32.13■■■□□ 2.73
ALYREF-203ENST00000511412 LAMB2P55268 1798 aa32.13■■■□□ 2.73
ALYREF-203ENST00000511412 C3orf67Q6ZVT6 689 aa32.13■■■□□ 2.73
ALYREF-203ENST00000511412 GRIPAP1Q4V328 841 aa32.11■■■□□ 2.73
ALYREF-203ENST00000511412 SLC10A5Q5PT55 438 aa32.1■■■□□ 2.73
ALYREF-203ENST00000511412 NLRP10Q86W26 655 aa32.1■■■□□ 2.73
ALYREF-203ENST00000511412 TCIRG1Q13488 830 aa32.09■■■□□ 2.73
ALYREF-203ENST00000511412 CHADLQ6NUI6 762 aa32.09■■■□□ 2.73
ALYREF-203ENST00000511412 FZD9O00144 591 aa32.08■■■□□ 2.73
ALYREF-203ENST00000511412 APAF1O14727 1248 aa32.08■■■□□ 2.73
ALYREF-203ENST00000511412 JDP2Q8WYK2 163 aa32.08■■■□□ 2.73
ALYREF-203ENST00000511412 MBIPQ9NS73 344 aa32.08■■■□□ 2.73
ALYREF-203ENST00000511412 DBF4Q9UBU7 674 aaPredicted RBP32.08■■■□□ 2.73
ALYREF-203ENST00000511412 POTEIP0CG38 1075 aa32.07■■■□□ 2.72
ALYREF-203ENST00000511412 POTEJP0CG39 1038 aa32.07■■■□□ 2.72
ALYREF-203ENST00000511412 COL4A5P29400 1685 aa32.06■■■□□ 2.72
ALYREF-203ENST00000511412 TCERG1O14776 1098 aaKnown RBP32.06■■■□□ 2.72
ALYREF-203ENST00000511412 DUSP27Q5VZP5 1158 aa32.06■■■□□ 2.72
ALYREF-203ENST00000511412 TAF1DQ9H5J8 278 aaPredicted RBP32.06■■■□□ 2.72
ALYREF-203ENST00000511412 TRMT112Q9UI30 125 aaKnown RBP32.06■■■□□ 2.72
ALYREF-203ENST00000511412 ABCC4O15439 1325 aa32.05■■■□□ 2.72
ALYREF-203ENST00000511412 SH3TC1Q8TE82 1336 aa32.05■■■□□ 2.72
ALYREF-203ENST00000511412 CALD1Q05682 793 aaKnown RBP32.05■■■□□ 2.72
ALYREF-203ENST00000511412 SLC51AQ86UW1 340 aa32.05■■■□□ 2.72
ALYREF-203ENST00000511412 JMYQ8N9B5 988 aa32.05■■■□□ 2.72
ALYREF-203ENST00000511412 PLBD2Q8NHP8 589 aa32.05■■■□□ 2.72
ALYREF-203ENST00000511412 TMX4Q9H1E5 349 aaPredicted RBP32.05■■■□□ 2.72
ALYREF-203ENST00000511412 LDHDQ86WU2 507 aa32.04■■■□□ 2.72
ALYREF-203ENST00000511412 IFT57Q9NWB7 429 aa32.04■■■□□ 2.72
ALYREF-203ENST00000511412 ZNF853P0CG23 659 aa32.03■■■□□ 2.72
ALYREF-203ENST00000511412 GPC2Q8N158 579 aa32.03■■■□□ 2.72
ALYREF-203ENST00000511412 HYPKQ9NX55 129 aa32.03■■■□□ 2.72
ALYREF-203ENST00000511412 HACL1Q9UJ83 578 aa32.03■■■□□ 2.72
ALYREF-203ENST00000511412 HCLS1P14317 486 aaPredicted RBP32.02■■■□□ 2.72
ALYREF-203ENST00000511412 GNAI1P63096 354 aa32.02■■■□□ 2.72
ALYREF-203ENST00000511412 ANKRD13DQ6ZTN6 518 aa32.02■■■□□ 2.72
ALYREF-203ENST00000511412 LARGE2Q8N3Y3 721 aa32.02■■■□□ 2.72
ALYREF-203ENST00000511412 ATP6V0A2Q9Y487 856 aa32.02■■■□□ 2.72
ALYREF-203ENST00000511412 DDX60Q8IY21 1712 aaKnown RBP32.02■■■□□ 2.72
ALYREF-203ENST00000511412 ADAMTSL1Q8N6G6 1762 aa32.02■■■□□ 2.72
ALYREF-203ENST00000511412 EIF6P56537 245 aaKnown RBP32.01■■■□□ 2.71
ALYREF-203ENST00000511412 EAPPQ56P03 285 aaPredicted RBP32■■■□□ 2.71
ALYREF-203ENST00000511412 EPHX2P34913 555 aa31.99■■■□□ 2.71
ALYREF-203ENST00000511412 IFFO2Q5TF58 517 aa31.99■■■□□ 2.71
ALYREF-203ENST00000511412 DDX46Q7L014 1031 aaKnown RBP31.98■■■□□ 2.71
ALYREF-203ENST00000511412 NIM1KQ8IY84 436 aa31.97■■■□□ 2.71
ALYREF-203ENST00000511412 ISCA1Q9BUE6 129 aa31.97■■■□□ 2.71
ALYREF-203ENST00000511412 PPIP5K2O43314 1243 aa31.96■■■□□ 2.71
ALYREF-203ENST00000511412 BBOX1O75936 387 aa31.96■■■□□ 2.71
ALYREF-203ENST00000511412 ZNF428Q96B54 188 aa31.96■■■□□ 2.71
ALYREF-203ENST00000511412 CREBZFQ9NS37 354 aa31.96■■■□□ 2.71
ALYREF-203ENST00000511412 GJA3Q9Y6H8 435 aa31.96■■■□□ 2.71
ALYREF-203ENST00000511412 GRAPQ13588 217 aa31.95■■■□□ 2.71
ALYREF-203ENST00000511412 PNMA8AQ86V59 439 aaPredicted RBP31.95■■■□□ 2.71
ALYREF-203ENST00000511412 SUPT20HQ8NEM7 779 aa31.95■■■□□ 2.71
ALYREF-203ENST00000511412 GRAPLQ8TC17 118 aaPredicted RBP31.95■■■□□ 2.71
ALYREF-203ENST00000511412 ATP5J2-PTCD1G3V325 749 aa31.94■■■□□ 2.7
ALYREF-203ENST00000511412 AOC3Q16853 763 aa31.94■■■□□ 2.7
ALYREF-203ENST00000511412 VPS33BQ9H267 617 aa31.94■■■□□ 2.7
ALYREF-203ENST00000511412 LRRC37AA6NMS7 1700 aa31.94■■■□□ 2.7
ALYREF-203ENST00000511412 LTBP1Q14766 1721 aa31.94■■■□□ 2.7
ALYREF-203ENST00000511412 TAF1P21675 1872 aa31.93■■■□□ 2.7
ALYREF-203ENST00000511412 ZEB1P37275 1124 aaPredicted RBP31.93■■■□□ 2.7
ALYREF-203ENST00000511412 GOLGA2Q08379 1002 aa31.93■■■□□ 2.7
ALYREF-203ENST00000511412 DPP8Q6V1X1 898 aaPredicted RBP31.93■■■□□ 2.7
ALYREF-203ENST00000511412 SP8Q8IXZ3 490 aa31.93■■■□□ 2.7
ALYREF-203ENST00000511412 CLEC11AQ9Y240 323 aa31.93■■■□□ 2.7
ALYREF-203ENST00000511412 PASKQ96RG2 1323 aa31.93■■■□□ 2.7
ALYREF-203ENST00000511412 ELL2O00472 640 aaPredicted RBP31.92■■■□□ 2.7
ALYREF-203ENST00000511412 LMOD1P29536 600 aaPredicted RBP31.92■■■□□ 2.7
ALYREF-203ENST00000511412 FAM89AQ96GI7 184 aa31.92■■■□□ 2.7
ALYREF-203ENST00000511412 RTFDC1Q9BY42 306 aaPredicted RBP31.92■■■□□ 2.7
ALYREF-203ENST00000511412 MPNDQ8N594 471 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms