RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 MMP10P09238 476 aa15.8■□□□□ 0.12
HMGB2-205ENST00000511316 POLD1P28340 1107 aa15.8■□□□□ 0.12
HMGB2-205ENST00000511316 GNAI1P63096 354 aa15.8■□□□□ 0.12
HMGB2-205ENST00000511316 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
HMGB2-205ENST00000511316 TBC1D2BQ9UPU7 963 aa15.8■□□□□ 0.12
HMGB2-205ENST00000511316 TNNQ9UQP3 1299 aa15.8■□□□□ 0.12
HMGB2-205ENST00000511316 DDR1Q08345 913 aa15.8■□□□□ 0.12
HMGB2-205ENST00000511316 RAB3GAP1Q15042 981 aa15.8■□□□□ 0.12
HMGB2-205ENST00000511316 GRPEL1Q9HAV7 217 aa15.8■□□□□ 0.12
HMGB2-205ENST00000511316 PPP1R1BQ9UD71 204 aaPredicted RBP15.8■□□□□ 0.12
HMGB2-205ENST00000511316 API5Q9BZZ5 524 aaKnown RBP15.79■□□□□ 0.12
HMGB2-205ENST00000511316 PROSER3Q2NL68 480 aa15.78■□□□□ 0.12
HMGB2-205ENST00000511316 ANP32BQ92688 251 aaKnown RBP15.78■□□□□ 0.12
HMGB2-205ENST00000511316 HSP90AA1P07900 732 aaKnown RBP15.78■□□□□ 0.12
HMGB2-205ENST00000511316 NFIXQ14938 502 aa15.78■□□□□ 0.12
HMGB2-205ENST00000511316 NLGN2Q8NFZ4 835 aa15.78■□□□□ 0.12
HMGB2-205ENST00000511316 TRIM44Q96DX7 344 aaPredicted RBP15.78■□□□□ 0.12
HMGB2-205ENST00000511316 K7ELQ4 463 aaPredicted RBP15.77■□□□□ 0.11
HMGB2-205ENST00000511316 POLRMTO00411 1230 aaKnown RBP15.77■□□□□ 0.11
HMGB2-205ENST00000511316 ZPR1O75312 459 aa15.77■□□□□ 0.11
HMGB2-205ENST00000511316 C8orf58Q8NAV2 365 aa15.77■□□□□ 0.11
HMGB2-205ENST00000511316 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.77■□□□□ 0.11
HMGB2-205ENST00000511316 TSPYL6Q8N831 410 aa15.76■□□□□ 0.11
HMGB2-205ENST00000511316 CDC45O75419 566 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 EIF2S2P20042 333 aaKnown RBP15.75■□□□□ 0.11
HMGB2-205ENST00000511316 TBC1D9BQ66K14 1250 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 CD2APQ9Y5K6 639 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 ABCC4O15439 1325 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 A0A087WZG4 1122 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 ANXA1P04083 346 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 HOXB7P09629 217 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 RABEP1Q15276 862 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 HLFQ16534 295 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 TTLL7Q6ZT98 887 aa15.75■□□□□ 0.11
HMGB2-205ENST00000511316 DZIP3Q86Y13 1208 aaKnown RBP15.75■□□□□ 0.11
HMGB2-205ENST00000511316 RRAGDQ9NQL2 400 aaPredicted RBP15.75■□□□□ 0.11
HMGB2-205ENST00000511316 ZBTB7BO15156 539 aaPredicted RBP15.74■□□□□ 0.11
HMGB2-205ENST00000511316 NUCB2P80303 420 aa15.74■□□□□ 0.11
HMGB2-205ENST00000511316 ZNF330Q9Y3S2 320 aaPredicted RBP15.74■□□□□ 0.11
HMGB2-205ENST00000511316 ERBB4Q15303 1308 aa15.74■□□□□ 0.11
HMGB2-205ENST00000511316 LAMB4A4D0S4 1761 aa15.74■□□□□ 0.11
HMGB2-205ENST00000511316 CASC1Q6TDU7 716 aa15.73■□□□□ 0.11
HMGB2-205ENST00000511316 TNPO1Q92973 898 aaKnown RBP15.73■□□□□ 0.11
HMGB2-205ENST00000511316 ELL2O00472 640 aaPredicted RBP15.73■□□□□ 0.11
HMGB2-205ENST00000511316 MYL6BP14649 208 aa15.73■□□□□ 0.11
HMGB2-205ENST00000511316 CCDC173Q0VFZ6 552 aa15.73■□□□□ 0.11
HMGB2-205ENST00000511316 CLEC4GQ6UXB4 293 aa15.73■□□□□ 0.11
HMGB2-205ENST00000511316 NECTIN2Q92692 538 aa15.73■□□□□ 0.11
HMGB2-205ENST00000511316 LNPKQ9C0E8 428 aa15.73■□□□□ 0.11
HMGB2-205ENST00000511316 CWC22Q9HCG8 908 aaKnown RBP15.73■□□□□ 0.11
HMGB2-205ENST00000511316 KCNA3P22001 575 aa15.72■□□□□ 0.11
HMGB2-205ENST00000511316 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
HMGB2-205ENST00000511316 DDX21Q9NR30 783 aaKnown RBP eCLIP15.72■□□□□ 0.11
HMGB2-205ENST00000511316 ESPNB1AK53 854 aa15.71■□□□□ 0.11
HMGB2-205ENST00000511316 RGL2O15211 777 aa15.71■□□□□ 0.11
HMGB2-205ENST00000511316 ANKRD45Q5TZF3 282 aa15.71■□□□□ 0.11
HMGB2-205ENST00000511316 ERVV-1B6SEH8 477 aa15.71■□□□□ 0.1
HMGB2-205ENST00000511316 KLHL40Q2TBA0 621 aa15.71■□□□□ 0.1
HMGB2-205ENST00000511316 CHPF2Q9P2E5 772 aa15.71■□□□□ 0.1
HMGB2-205ENST00000511316 PARP3Q9Y6F1 533 aa15.71■□□□□ 0.1
HMGB2-205ENST00000511316 C10orf71Q711Q0 1435 aa15.7■□□□□ 0.1
HMGB2-205ENST00000511316 RRP9O43818 475 aaKnown RBP15.7■□□□□ 0.1
HMGB2-205ENST00000511316 VAMP4O75379 141 aa15.7■□□□□ 0.1
HMGB2-205ENST00000511316 SERPINB2P05120 415 aa15.7■□□□□ 0.1
HMGB2-205ENST00000511316 HS1BP3Q53T59 392 aa15.7■□□□□ 0.1
HMGB2-205ENST00000511316 SCN7AQ01118 1682 aa15.69■□□□□ 0.1
HMGB2-205ENST00000511316 NRXN2Q9P2S2 1712 aa15.69■□□□□ 0.1
HMGB2-205ENST00000511316 KIF13BQ9NQT8 1826 aa15.69■□□□□ 0.1
HMGB2-205ENST00000511316 HDGFL1Q5TGJ6 251 aa15.69■□□□□ 0.1
HMGB2-205ENST00000511316 BICDL1Q6ZP65 573 aa15.69■□□□□ 0.1
HMGB2-205ENST00000511316 COPS6Q7L5N1 327 aa15.69■□□□□ 0.1
HMGB2-205ENST00000511316 GZF1Q9H116 711 aaPredicted RBP15.69■□□□□ 0.1
HMGB2-205ENST00000511316 MAP3K15Q6ZN16 1313 aa15.69■□□□□ 0.1
HMGB2-205ENST00000511316 TPM2P07951 284 aa15.68■□□□□ 0.1
HMGB2-205ENST00000511316 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
HMGB2-205ENST00000511316 SPRYD3Q8NCJ5 442 aa15.68■□□□□ 0.1
HMGB2-205ENST00000511316 KIAA1551Q9HCM1 1747 aa15.68■□□□□ 0.1
HMGB2-205ENST00000511316 BCORQ6W2J9 1755 aa15.68■□□□□ 0.1
HMGB2-205ENST00000511316 YBX3P16989 372 aaKnown RBP eCLIP15.68■□□□□ 0.12e-29■□□□□ 10.8
HMGB2-205ENST00000511316 INTS3Q68E01 1043 aaKnown RBP15.68■□□□□ 0.1
HMGB2-205ENST00000511316 RPAP2Q8IXW5 612 aaPredicted RBP15.68■□□□□ 0.1
HMGB2-205ENST00000511316 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
HMGB2-205ENST00000511316 XAGE3Q8WTP9 111 aa15.68■□□□□ 0.1
HMGB2-205ENST00000511316 AFDNP55196 1824 aaKnown RBP15.67■□□□□ 0.1
HMGB2-205ENST00000511316 CARMIL3Q8ND23 1372 aa15.67■□□□□ 0.1
HMGB2-205ENST00000511316 TERF1P54274 439 aa15.67■□□□□ 0.1
HMGB2-205ENST00000511316 TGFB2P61812 414 aa15.67■□□□□ 0.1
HMGB2-205ENST00000511316 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
HMGB2-205ENST00000511316 ZNF34Q8IZ26 560 aa15.67■□□□□ 0.1
HMGB2-205ENST00000511316 DBF4Q9UBU7 674 aaPredicted RBP15.67■□□□□ 0.1
HMGB2-205ENST00000511316 PXDNLA1KZ92 1463 aa15.67■□□□□ 0.1
HMGB2-205ENST00000511316 A0A0G2JLW4 131 aa15.66■□□□□ 0.1
HMGB2-205ENST00000511316 PRR5LQ6MZQ0 368 aa15.66■□□□□ 0.1
HMGB2-205ENST00000511316 NAP1L5Q96NT1 182 aaPredicted RBP15.66■□□□□ 0.1
HMGB2-205ENST00000511316 PPP1R9BQ96SB3 815 aa15.66■□□□□ 0.1
HMGB2-205ENST00000511316 SETDB2Q96T68 719 aa15.66■□□□□ 0.1
HMGB2-205ENST00000511316 ZBTB3Q9H5J0 574 aa15.66■□□□□ 0.1
HMGB2-205ENST00000511316 PHAXQ9H814 394 aaKnown RBP15.66■□□□□ 0.1
HMGB2-205ENST00000511316 ST18O60284 1047 aa15.66■□□□□ 0.1
HMGB2-205ENST00000511316 CCDC24Q8N4L8 307 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms