RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ZNRF3Q9ULT6 936 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 SH3TC1Q8TE82 1336 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 USP42Q9H9J4 1324 aaKnown RBP3.58□□□□□ -1.84
CLOCK-209ENST00000511124 MANSC4A6NHS7 340 aaPredicted RBP3.58□□□□□ -1.84
CLOCK-209ENST00000511124 HOXB7P09629 217 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 HSP90AB2PQ58FF8 381 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 SPTY2D1Q68D10 685 aaPredicted RBP3.58□□□□□ -1.84
CLOCK-209ENST00000511124 SYNE4Q8N205 404 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 FAM177BA6PVY3 158 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 PPEF1O14829 653 aaPredicted RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 CAVIN4Q5BKX8 364 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 PPP4R3BQ5MIZ7 849 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 CTU1Q7Z7A3 348 aaKnown RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 CERS3Q8IU89 383 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 DNAJC10Q8IXB1 793 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 SLC10A4Q96EP9 437 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 GPR101Q96P66 508 aaPredicted RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 MPHOSPH6Q99547 160 aaKnown RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 CHMP3Q9Y3E7 222 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 PPP2R3BQ9Y5P8 575 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 HUNKP57058 714 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 DGKZQ13574 1117 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 CNTROBQ8N137 903 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 TBC1D22AQ8WUA7 517 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 HHIPL1Q96JK4 782 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 COL15A1P39059 1388 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 C10orf71Q711Q0 1435 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 GLI3P10071 1580 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 ZNF316A6NFI3 1004 aaPredicted RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 B4DLN1 442 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 IPO8O15397 1037 aaKnown RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 GNRH1P01148 92 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 EIF2S2P20042 333 aaKnown RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 ZNF157P51786 506 aaPredicted RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 MRPL12P52815 198 aaKnown RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 CC2D1BQ5T0F9 858 aaKnown RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 PSMD1Q99460 953 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 DBF4Q9UBU7 674 aaPredicted RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 MKRN1Q9UHC7 482 aaKnown RBP3.57□□□□□ -1.84
CLOCK-209ENST00000511124 FANCIQ9NVI1 1328 aa3.57□□□□□ -1.84
CLOCK-209ENST00000511124 C21orf2O43822 256 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 PTGER2P43116 358 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 EIF4A2Q14240 407 aaKnown RBP3.56□□□□□ -1.84
CLOCK-209ENST00000511124 DLGAP5Q15398 846 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 ZNF790Q6PG37 636 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 USP48Q86UV5 1035 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 GTF3C2Q8WUA4 911 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-209ENST00000511124 CAPNS2Q96L46 248 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 ZFYVE28Q9HCC9 887 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 GBA2Q9HCG7 927 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-209ENST00000511124 PNMA3Q9UL41 463 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 IGSF3O75054 1194 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 FKTNO75072 461 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 IFIT1P09914 478 aaKnown RBP3.56□□□□□ -1.84
CLOCK-209ENST00000511124 KRT26Q7Z3Y9 468 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-209ENST00000511124 DPF2Q92785 391 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 ATG3Q9NT62 314 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 BSDC1Q9NW68 430 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-209ENST00000511124 SAGE1Q9NXZ1 904 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 EMILIN1Q9Y6C2 1016 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 IFT172Q9UG01 1749 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 PXDNLA1KZ92 1463 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 CELF2O95319 508 aaKnown RBP3.56□□□□□ -1.84
CLOCK-209ENST00000511124 GYS1P13807 737 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 GSTO1P78417 241 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 ZNF827Q17R98 1081 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 WASHC4Q2M389 1173 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 HDGFL1Q5TGJ6 251 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 ERICH6Q7L0X2 663 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 SP8Q8IXZ3 490 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 TRMT44Q8IYL2 757 aaKnown RBP3.56□□□□□ -1.84
CLOCK-209ENST00000511124 C9orf78Q9NZ63 289 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-209ENST00000511124 ASAP1Q9ULH1 1129 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 SLIT3O75094 1523 aa3.56□□□□□ -1.84
CLOCK-209ENST00000511124 MYO5BQ9ULV0 1848 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 ANKRD18BA2A2Z9 1011 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 HSPA5P11021 654 aaKnown RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 PRKAR2BP31323 418 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 OS9Q13438 667 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 PDE3AQ14432 1141 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 CCDC57Q2TAC2 916 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 PRPF40BQ6NWY9 871 aaKnown RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 LBHD1Q9BQE6 289 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 CNNM1Q9NRU3 951 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 NSFL1CQ9UNZ2 370 aaKnown RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 TBC1D2BQ9UPU7 963 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 KCNH4Q9UQ05 1017 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 FAM208AQ9UK61 1670 aaKnown RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 HMOX1P09601 288 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 PLCG2P16885 1265 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 CCNA1P78396 465 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 NFIXQ14938 502 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 RGMBQ6NW40 437 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 PODNQ7Z5L7 613 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 AGBL3Q8NEM8 1001 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 RNF25Q96BH1 459 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 TBC1D2Q9BYX2 928 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 PICK1Q9NRD5 415 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 CWC25Q9NXE8 425 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms