RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LARP1Q6PKG0 1096 aaKnown RBP14.16□□□□□ -0.14
USP53-206ENST00000510737 USP17L15C9J2P7 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L10C9JJH3 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L13C9JLJ4 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L12C9JPN9 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L11C9JVI0 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L21D6R901 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L18D6R9N7 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L22D6RA61 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L17D6RBQ6 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L19D6RCP7 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L20D6RJB6 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 USP17L24Q0WX57 530 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 MICALL1Q8N3F8 863 aa14.15□□□□□ -0.14
USP53-206ENST00000510737 ARXQ96QS3 562 aa14.14□□□□□ -0.15
USP53-206ENST00000510737 HINFPQ9BQA5 517 aa14.14□□□□□ -0.15
USP53-206ENST00000510737 LMOD1P29536 600 aaPredicted RBP14.13□□□□□ -0.15
USP53-206ENST00000510737 C20orf204Q6ZNR8 217 aa14.13□□□□□ -0.15
USP53-206ENST00000510737 BHMTQ93088 406 aa14.13□□□□□ -0.15
USP53-206ENST00000510737 DMGDHQ9UI17 866 aaKnown RBP14.13□□□□□ -0.15
USP53-206ENST00000510737 FAM229AH3BQW9 127 aa14.12□□□□□ -0.15
USP53-206ENST00000510737 SPATA31C1P0DKV0 1188 aa14.12□□□□□ -0.15
USP53-206ENST00000510737 GRNP28799 593 aaKnown RBP14.12□□□□□ -0.15
USP53-206ENST00000510737 ANKMY2Q8IV38 441 aa14.12□□□□□ -0.15
USP53-206ENST00000510737 PRDM6Q9NQX0 595 aa14.12□□□□□ -0.15
USP53-206ENST00000510737 FAM196BA6NMK8 535 aa14.11□□□□□ -0.15
USP53-206ENST00000510737 ITGB7P26010 798 aa14.11□□□□□ -0.15
USP53-206ENST00000510737 NID1P14543 1247 aa14.1□□□□□ -0.15
USP53-206ENST00000510737 RTN1Q16799 776 aa14.1□□□□□ -0.15
USP53-206ENST00000510737 IGFBP4P22692 258 aa14.09□□□□□ -0.15
USP53-206ENST00000510737 CFAP70Q5T0N1 1121 aa14.09□□□□□ -0.15
USP53-206ENST00000510737 VRTNQ9H8Y1 702 aa14.09□□□□□ -0.15
USP53-206ENST00000510737 DOC2BQ14184 412 aa14.08□□□□□ -0.16
USP53-206ENST00000510737 GSX2Q9BZM3 304 aa14.08□□□□□ -0.16
USP53-206ENST00000510737 NEUROD1Q13562 356 aa14.07□□□□□ -0.16
USP53-206ENST00000510737 IER5Q5VY09 327 aa14.06□□□□□ -0.16
USP53-206ENST00000510737 KLK14Q9P0G3 267 aa14.06□□□□□ -0.16
USP53-206ENST00000510737 TGFBR3LH3BV60 316 aa14.05□□□□□ -0.16
USP53-206ENST00000510737 XP32Q5T750 250 aa14.04□□□□□ -0.16
USP53-206ENST00000510737 QTRT2Q9H974 415 aaKnown RBP14.04□□□□□ -0.16
USP53-206ENST00000510737 ZNF777Q9ULD5 760 aaPredicted RBP14.04□□□□□ -0.16
USP53-206ENST00000510737 WEE1P30291 646 aa14.03□□□□□ -0.16
USP53-206ENST00000510737 TBC1D8BQ0IIM8 1120 aa14.03□□□□□ -0.16
USP53-206ENST00000510737 HIF1AQ16665 826 aa14.03□□□□□ -0.16
USP53-206ENST00000510737 UBE2OQ9C0C9 1292 aaKnown RBP14.03□□□□□ -0.16
USP53-206ENST00000510737 IGFLR1Q9H665 355 aa14.03□□□□□ -0.16
USP53-206ENST00000510737 NAGPAQ9UK23 515 aa14.03□□□□□ -0.16
USP53-206ENST00000510737 SLC6A14Q9UN76 642 aa14.03□□□□□ -0.16
USP53-206ENST00000510737 GATA4P43694 442 aa14.02□□□□□ -0.17
USP53-206ENST00000510737 INPP5BP32019 993 aa14.01□□□□□ -0.17
USP53-206ENST00000510737 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
USP53-206ENST00000510737 PRRT3Q5FWE3 981 aa14.01□□□□□ -0.17
USP53-206ENST00000510737 SPDYE3A6NKU9 549 aa14□□□□□ -0.17
USP53-206ENST00000510737 GRIK4Q16099 956 aa14□□□□□ -0.17
USP53-206ENST00000510737 DNAJB12Q9NXW2 375 aaKnown RBP14□□□□□ -0.17
USP53-206ENST00000510737 NFKB1P19838 968 aa13.99□□□□□ -0.17
USP53-206ENST00000510737 DGKZQ13574 1117 aa13.99□□□□□ -0.17
USP53-206ENST00000510737 CCINQ13939 588 aa13.99□□□□□ -0.17
USP53-206ENST00000510737 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.99□□□□□ -0.17
USP53-206ENST00000510737 IDH3AP50213 366 aa13.98□□□□□ -0.17
USP53-206ENST00000510737 NUDT8Q8WV74 236 aa13.98□□□□□ -0.17
USP53-206ENST00000510737 LILRB5O75023 590 aa13.97□□□□□ -0.17
USP53-206ENST00000510737 ZFATQ9P243 1243 aa13.97□□□□□ -0.17
USP53-206ENST00000510737 TRIM28Q13263 835 aaKnown RBP13.96□□□□□ -0.17
USP53-206ENST00000510737 SEMA6BQ9H3T3 888 aa13.96□□□□□ -0.17
USP53-206ENST00000510737 LRFN2Q9ULH4 789 aa13.96□□□□□ -0.17
USP53-206ENST00000510737 FOXO3O43524 673 aa13.95□□□□□ -0.18
USP53-206ENST00000510737 RSPO4Q2I0M5 234 aaPredicted RBP13.95□□□□□ -0.18
USP53-206ENST00000510737 ILDR2Q71H61 639 aa13.95□□□□□ -0.18
USP53-206ENST00000510737 EFCC1Q9HA90 598 aa13.95□□□□□ -0.18
USP53-206ENST00000510737 JPH1Q9HDC5 661 aaPredicted RBP13.95□□□□□ -0.18
USP53-206ENST00000510737 TPSG1Q9NRR2 321 aa13.95□□□□□ -0.18
USP53-206ENST00000510737 APBA3O96018 575 aa13.94□□□□□ -0.18
USP53-206ENST00000510737 PSAPL1Q6NUJ1 521 aa13.94□□□□□ -0.18
USP53-206ENST00000510737 PNMA5Q96PV4 448 aa13.94□□□□□ -0.18
USP53-206ENST00000510737 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
USP53-206ENST00000510737 AFF1P51825 1210 aaKnown RBP13.93□□□□□ -0.18
USP53-206ENST00000510737 NKAPLQ5M9Q1 402 aa13.93□□□□□ -0.18
USP53-206ENST00000510737 TRAPPC3LQ5T215 181 aa13.93□□□□□ -0.18
USP53-206ENST00000510737 FAM200AQ8TCP9 573 aa13.93□□□□□ -0.18
USP53-206ENST00000510737 MYO19Q96H55 970 aa13.93□□□□□ -0.18
USP53-206ENST00000510737 USP20Q9Y2K6 914 aa13.93□□□□□ -0.18
USP53-206ENST00000510737 A0A0A0MRY4 1105 aa13.92□□□□□ -0.18
USP53-206ENST00000510737 MICAL2O94851 1124 aa13.92□□□□□ -0.18
USP53-206ENST00000510737 RFX1P22670 979 aa13.92□□□□□ -0.18
USP53-206ENST00000510737 KRT25Q7Z3Z0 450 aa13.92□□□□□ -0.18
USP53-206ENST00000510737 IFT43Q96FT9 208 aa13.92□□□□□ -0.18
USP53-206ENST00000510737 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
USP53-206ENST00000510737 OPLAHO14841 1288 aa13.91□□□□□ -0.18
USP53-206ENST00000510737 SELPP16109 830 aa13.91□□□□□ -0.18
USP53-206ENST00000510737 TARSP26639 723 aaKnown RBP13.91□□□□□ -0.18
USP53-206ENST00000510737 PLAURQ03405 335 aa13.91□□□□□ -0.18
USP53-206ENST00000510737 Q8N3U1 123 aa13.91□□□□□ -0.18
USP53-206ENST00000510737 FKBP5Q13451 457 aaPredicted RBP13.9□□□□□ -0.18
USP53-206ENST00000510737 C11orf91Q3C1V1 193 aa13.9□□□□□ -0.18
USP53-206ENST00000510737 ZMIZ1Q9ULJ6 1067 aa13.9□□□□□ -0.18
USP53-206ENST00000510737 NOVA2Q9UNW9 492 aaKnown RBP13.9□□□□□ -0.18
USP53-206ENST00000510737 ARSDP51689 593 aa13.89□□□□□ -0.19
USP53-206ENST00000510737 SASH3O75995 380 aa13.88□□□□□ -0.19
USP53-206ENST00000510737 MAP3K6O95382 1288 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms