RNA–Protein interactions for RNA: ENST00000510689.5

SPOCK1-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-209ENST00000510689 VEGFAP15692 232 aaPredicted RBP28.56■■■□□ 2.16
SPOCK1-209ENST00000510689 FSTL1Q12841 308 aa28.56■■■□□ 2.16
SPOCK1-209ENST00000510689 SLC10A5Q5PT55 438 aa28.56■■■□□ 2.16
SPOCK1-209ENST00000510689 C3orf67Q6ZVT6 689 aa28.56■■■□□ 2.16
SPOCK1-209ENST00000510689 MBIPQ9NS73 344 aa28.56■■■□□ 2.16
SPOCK1-209ENST00000510689 FKBP4Q02790 459 aaKnown RBP eCLIP28.55■■■□□ 2.16
SPOCK1-209ENST00000510689 CHPF2Q9P2E5 772 aa28.55■■■□□ 2.16
SPOCK1-209ENST00000510689 PPP1R42Q7Z4L9 355 aa28.54■■■□□ 2.16
SPOCK1-209ENST00000510689 C16orf71Q8IYS4 520 aaPredicted RBP28.54■■■□□ 2.16
SPOCK1-209ENST00000510689 APLP1P51693 650 aa28.53■■■□□ 2.16
SPOCK1-209ENST00000510689 AIMP1Q12904 312 aaKnown RBP28.53■■■□□ 2.16
SPOCK1-209ENST00000510689 TCIRG1Q13488 830 aa28.52■■■□□ 2.16
SPOCK1-209ENST00000510689 HDGFL1Q5TGJ6 251 aa28.52■■■□□ 2.16
SPOCK1-209ENST00000510689 DUSP27Q5VZP5 1158 aa28.52■■■□□ 2.16
SPOCK1-209ENST00000510689 DPY19L2Q6NUT2 758 aa28.52■■■□□ 2.16
SPOCK1-209ENST00000510689 NLRP10Q86W26 655 aa28.52■■■□□ 2.16
SPOCK1-209ENST00000510689 RTKN2Q8IZC4 609 aa28.52■■■□□ 2.16
SPOCK1-209ENST00000510689 DNAJC5GQ8N7S2 189 aa28.52■■■□□ 2.16
SPOCK1-209ENST00000510689 CRAMP1Q96RY5 1269 aa28.52■■■□□ 2.16
SPOCK1-209ENST00000510689 IFT57Q9NWB7 429 aa28.52■■■□□ 2.16
SPOCK1-209ENST00000510689 UTP14AQ9BVJ6 771 aaKnown RBP28.51■■■□□ 2.15
SPOCK1-209ENST00000510689 RNF123Q5XPI4 1314 aa28.5■■■□□ 2.15
SPOCK1-209ENST00000510689 ZNF277Q9NRM2 450 aaPredicted RBP28.5■■■□□ 2.15
SPOCK1-209ENST00000510689 HSP90AB3PQ58FF7 597 aa28.49■■■□□ 2.15
SPOCK1-209ENST00000510689 SLC51AQ86UW1 340 aa28.49■■■□□ 2.15
SPOCK1-209ENST00000510689 DBF4Q9UBU7 674 aaPredicted RBP28.49■■■□□ 2.15
SPOCK1-209ENST00000510689 SCN4AP35499 1836 aa28.48■■■□□ 2.15
SPOCK1-209ENST00000510689 DDNO94850 711 aaPredicted RBP28.48■■■□□ 2.15
SPOCK1-209ENST00000510689 SYNE4Q8N205 404 aa28.48■■■□□ 2.15
SPOCK1-209ENST00000510689 RPGRQ92834 1020 aaKnown RBP28.48■■■□□ 2.15
SPOCK1-209ENST00000510689 PSMD1Q99460 953 aa28.48■■■□□ 2.15
SPOCK1-209ENST00000510689 TAF1P21675 1872 aa28.48■■■□□ 2.15
SPOCK1-209ENST00000510689 DDX60Q8IY21 1712 aaKnown RBP28.47■■■□□ 2.15
SPOCK1-209ENST00000510689 GNAI1P63096 354 aa28.47■■■□□ 2.15
SPOCK1-209ENST00000510689 CC2D2BQ6DHV5 1058 aa28.47■■■□□ 2.15
SPOCK1-209ENST00000510689 SMC1BQ8NDV3 1235 aa28.47■■■□□ 2.15
SPOCK1-209ENST00000510689 PLBD2Q8NHP8 589 aa28.47■■■□□ 2.15
SPOCK1-209ENST00000510689 COL4A5P29400 1685 aa28.47■■■□□ 2.15
SPOCK1-209ENST00000510689 RBM17Q96I25 401 aaKnown RBP28.46■■■□□ 2.15
SPOCK1-209ENST00000510689 ZNF316A6NFI3 1004 aaPredicted RBP28.45■■■□□ 2.14
SPOCK1-209ENST00000510689 ANKRD13DQ6ZTN6 518 aa28.45■■■□□ 2.14
SPOCK1-209ENST00000510689 NLRP3Q96P20 1036 aa28.45■■■□□ 2.14
SPOCK1-209ENST00000510689 ISCA1Q9BUE6 129 aa28.45■■■□□ 2.14
SPOCK1-209ENST00000510689 HYPKQ9NX55 129 aa28.45■■■□□ 2.14
SPOCK1-209ENST00000510689 IARSP41252 1262 aaKnown RBP28.44■■■□□ 2.14
SPOCK1-209ENST00000510689 CALD1Q05682 793 aaKnown RBP28.44■■■□□ 2.14
SPOCK1-209ENST00000510689 L3MBTL3Q96JM7 780 aaPredicted RBP28.44■■■□□ 2.14
SPOCK1-209ENST00000510689 FZD9O00144 591 aa28.43■■■□□ 2.14
SPOCK1-209ENST00000510689 C8orf58Q8NAV2 365 aa28.43■■■□□ 2.14
SPOCK1-209ENST00000510689 ZNF541Q9H0D2 1346 aa28.43■■■□□ 2.14
SPOCK1-209ENST00000510689 HCLS1P14317 486 aaPredicted RBP28.42■■■□□ 2.14
SPOCK1-209ENST00000510689 CCDC27Q2M243 656 aa28.41■■■□□ 2.14
SPOCK1-209ENST00000510689 GRIPAP1Q4V328 841 aa28.41■■■□□ 2.14
SPOCK1-209ENST00000510689 TRMT112Q9UI30 125 aaKnown RBP28.41■■■□□ 2.14
SPOCK1-209ENST00000510689 ABCC4O15439 1325 aa28.41■■■□□ 2.14
SPOCK1-209ENST00000510689 PPEF1O14829 653 aaPredicted RBP28.4■■■□□ 2.14
SPOCK1-209ENST00000510689 HTRA3P83110 453 aa28.4■■■□□ 2.14
SPOCK1-209ENST00000510689 TRIM28Q13263 835 aaKnown RBP28.4■■■□□ 2.14
SPOCK1-209ENST00000510689 SH3TC1Q8TE82 1336 aa28.4■■■□□ 2.14
SPOCK1-209ENST00000510689 ELL2O00472 640 aaPredicted RBP28.39■■■□□ 2.14
SPOCK1-209ENST00000510689 ATP6V0A2Q9Y487 856 aa28.39■■■□□ 2.14
SPOCK1-209ENST00000510689 NCBP3Q53F19 620 aaKnown RBP28.38■■■□□ 2.13
SPOCK1-209ENST00000510689 PHAXQ9H814 394 aaKnown RBP28.38■■■□□ 2.13
SPOCK1-209ENST00000510689 POTEIP0CG38 1075 aa28.37■■■□□ 2.13
SPOCK1-209ENST00000510689 POTEJP0CG39 1038 aa28.37■■■□□ 2.13
SPOCK1-209ENST00000510689 WWC1Q8IX03 1113 aa28.37■■■□□ 2.13
SPOCK1-209ENST00000510689 TSPYL6Q8N831 410 aa28.37■■■□□ 2.13
SPOCK1-209ENST00000510689 PCNTO95613 3336 aa28.37■■■□□ 2.13
SPOCK1-209ENST00000510689 ADAMTSL1Q8N6G6 1762 aa28.37■■■□□ 2.13
SPOCK1-209ENST00000510689 ATP5J2-PTCD1G3V325 749 aa28.36■■■□□ 2.13
SPOCK1-209ENST00000510689 LRRC37AA6NMS7 1700 aa28.35■■■□□ 2.13
SPOCK1-209ENST00000510689 BBOX1O75936 387 aa28.35■■■□□ 2.13
SPOCK1-209ENST00000510689 ZNF428Q96B54 188 aa28.35■■■□□ 2.13
SPOCK1-209ENST00000510689 TAF1DQ9H5J8 278 aaPredicted RBP28.35■■■□□ 2.13
SPOCK1-209ENST00000510689 COL4A1P02462 1669 aa28.35■■■□□ 2.13
SPOCK1-209ENST00000510689 TCERG1O14776 1098 aaKnown RBP28.34■■■□□ 2.13
SPOCK1-209ENST00000510689 RTFDC1Q9BY42 306 aaPredicted RBP28.34■■■□□ 2.13
SPOCK1-209ENST00000510689 SP8Q8IXZ3 490 aa28.33■■■□□ 2.13
SPOCK1-209ENST00000510689 FAM89AQ96GI7 184 aa28.33■■■□□ 2.13
SPOCK1-209ENST00000510689 LTBP1Q14766 1721 aa28.32■■■□□ 2.12
SPOCK1-209ENST00000510689 IQCA1LA6NCM1 817 aa28.32■■■□□ 2.12
SPOCK1-209ENST00000510689 SF3B3Q15393 1217 aaKnown RBP28.32■■■□□ 2.12
SPOCK1-209ENST00000510689 CHADLQ6NUI6 762 aa28.32■■■□□ 2.12
SPOCK1-209ENST00000510689 TSR2Q969E8 191 aaKnown RBP28.32■■■□□ 2.12
SPOCK1-209ENST00000510689 KLRG1Q96E93 195 aa28.32■■■□□ 2.12
SPOCK1-209ENST00000510689 MRS2Q9HD23 443 aa28.32■■■□□ 2.12
SPOCK1-209ENST00000510689 GPC2Q8N158 579 aa28.31■■■□□ 2.12
SPOCK1-209ENST00000510689 CACNA1FO60840 1977 aa28.3■■■□□ 2.12
SPOCK1-209ENST00000510689 DUOX1Q9NRD9 1551 aa28.3■■■□□ 2.12
SPOCK1-209ENST00000510689 IL16Q14005 1332 aa28.3■■■□□ 2.12
SPOCK1-209ENST00000510689 ANP32CO43423 234 aa28.3■■■□□ 2.12
SPOCK1-209ENST00000510689 GRAPQ13588 217 aa28.3■■■□□ 2.12
SPOCK1-209ENST00000510689 GRAPLQ8TC17 118 aaPredicted RBP28.3■■■□□ 2.12
SPOCK1-209ENST00000510689 JDP2Q8WYK2 163 aa28.3■■■□□ 2.12
SPOCK1-209ENST00000510689 VPS33BQ9H267 617 aa28.3■■■□□ 2.12
SPOCK1-209ENST00000510689 CCDC30Q5VVM6 783 aa28.29■■■□□ 2.12
SPOCK1-209ENST00000510689 DDX46Q7L014 1031 aaKnown RBP28.29■■■□□ 2.12
SPOCK1-209ENST00000510689 RIC3Q7Z5B4 369 aa28.29■■■□□ 2.12
SPOCK1-209ENST00000510689 JMYQ8N9B5 988 aa28.29■■■□□ 2.12
SPOCK1-209ENST00000510689 GOLGA2Q08379 1002 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms