RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
RETREG1-206ENST00000510362 WWC1Q8IX03 1113 aa12.56□□□□□ -0.4
RETREG1-206ENST00000510362 KCNH5Q8NCM2 988 aa12.56□□□□□ -0.4
RETREG1-206ENST00000510362 ARMC2Q8NEN0 867 aa12.56□□□□□ -0.4
RETREG1-206ENST00000510362 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
RETREG1-206ENST00000510362 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
RETREG1-206ENST00000510362 ANKRD36BQ8N2N9 1353 aa12.56□□□□□ -0.4
RETREG1-206ENST00000510362 EIF4G2P78344 907 aaKnown RBP eCLIP12.55□□□□□ -0.4
RETREG1-206ENST00000510362 ZNF330Q9Y3S2 320 aaPredicted RBP12.55□□□□□ -0.4
RETREG1-206ENST00000510362 ABCC6O95255 1503 aa12.55□□□□□ -0.4
RETREG1-206ENST00000510362 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
RETREG1-206ENST00000510362 NFAT5O94916 1531 aa12.54□□□□□ -0.4
RETREG1-206ENST00000510362 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
RETREG1-206ENST00000510362 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
RETREG1-206ENST00000510362 CHRNA2Q15822 529 aa12.53□□□□□ -0.4
RETREG1-206ENST00000510362 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.53□□□□□ -0.4
RETREG1-206ENST00000510362 GPKOWQ92917 476 aaPredicted RBP eCLIP12.53□□□□□ -0.4
RETREG1-206ENST00000510362 CAMTA1Q9Y6Y1 1673 aa12.53□□□□□ -0.4
RETREG1-206ENST00000510362 AATKQ6ZMQ8 1374 aa12.53□□□□□ -0.4
RETREG1-206ENST00000510362 LTN1O94822 1766 aa12.53□□□□□ -0.4
RETREG1-206ENST00000510362 COL18A1P39060 1754 aa12.53□□□□□ -0.4
RETREG1-206ENST00000510362 KIF20BQ96Q89 1820 aa12.53□□□□□ -0.4
RETREG1-206ENST00000510362 WASHC4Q2M389 1173 aa12.52□□□□□ -0.41
RETREG1-206ENST00000510362 BAP1Q92560 729 aa12.52□□□□□ -0.41
RETREG1-206ENST00000510362 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.41
RETREG1-206ENST00000510362 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.41
RETREG1-206ENST00000510362 OVOS2A0A0J9YW53 1432 aa12.52□□□□□ -0.41
RETREG1-206ENST00000510362 OVOS2Q6IE36 1432 aa12.52□□□□□ -0.41
RETREG1-206ENST00000510362 COL5A2P05997 1499 aaPredicted RBP12.52□□□□□ -0.41
RETREG1-206ENST00000510362 THSD7AQ9UPZ6 1657 aa12.51□□□□□ -0.41
RETREG1-206ENST00000510362 POM121CA8CG34 1229 aa12.51□□□□□ -0.41
RETREG1-206ENST00000510362 ZBTB24O43167 697 aaPredicted RBP12.51□□□□□ -0.41
RETREG1-206ENST00000510362 EVA1CP58658 441 aa12.51□□□□□ -0.41
RETREG1-206ENST00000510362 VAC14Q08AM6 782 aa12.51□□□□□ -0.41
RETREG1-206ENST00000510362 LINC01559Q495D7 138 aa12.51□□□□□ -0.41
RETREG1-206ENST00000510362 PDXDC2PQ6P474 469 aa12.51□□□□□ -0.41
RETREG1-206ENST00000510362 A0A0G2JS52 829 aa12.5□□□□□ -0.41
RETREG1-206ENST00000510362 FBXO45P0C2W1 286 aa12.5□□□□□ -0.41
RETREG1-206ENST00000510362 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
RETREG1-206ENST00000510362 NME9Q86XW9 330 aa12.5□□□□□ -0.41
RETREG1-206ENST00000510362 STRN4Q9NRL3 753 aa12.5□□□□□ -0.41
RETREG1-206ENST00000510362 RGPD5Q99666 1765 aa12.5□□□□□ -0.41
RETREG1-206ENST00000510362 SPATA31A1Q5TZJ5 1347 aa12.49□□□□□ -0.41
RETREG1-206ENST00000510362 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
RETREG1-206ENST00000510362 ZBBXA8MT70 800 aa12.49□□□□□ -0.41
RETREG1-206ENST00000510362 TRIM32Q13049 653 aa12.49□□□□□ -0.41
RETREG1-206ENST00000510362 ARHGEF25Q86VW2 580 aa12.49□□□□□ -0.41
RETREG1-206ENST00000510362 SEPT12Q8IYM1 358 aa12.49□□□□□ -0.41
RETREG1-206ENST00000510362 ZNF511Q8NB15 262 aa12.49□□□□□ -0.41
RETREG1-206ENST00000510362 EP400Q96L91 3159 aa12.49□□□□□ -0.41
RETREG1-206ENST00000510362 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
RETREG1-206ENST00000510362 CRB1P82279 1406 aa12.48□□□□□ -0.41
RETREG1-206ENST00000510362 MYT1Q01538 1121 aa12.48□□□□□ -0.41
RETREG1-206ENST00000510362 NR1H3Q13133 447 aa12.48□□□□□ -0.41
RETREG1-206ENST00000510362 SH3BP5LQ7L8J4 393 aa12.48□□□□□ -0.41
RETREG1-206ENST00000510362 EMID1Q96A84 441 aaPredicted RBP12.48□□□□□ -0.41
RETREG1-206ENST00000510362 OCSTAMPQ9BR26 566 aa12.48□□□□□ -0.41
RETREG1-206ENST00000510362 C1orf115Q9H7X2 142 aa12.48□□□□□ -0.41
RETREG1-206ENST00000510362 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
RETREG1-206ENST00000510362 RPIAP49247 311 aa12.47□□□□□ -0.41
RETREG1-206ENST00000510362 PTK2Q05397 1052 aa12.47□□□□□ -0.41
RETREG1-206ENST00000510362 COG3Q96JB2 828 aa12.47□□□□□ -0.41
RETREG1-206ENST00000510362 GPSM3Q9Y4H4 160 aa12.47□□□□□ -0.41
RETREG1-206ENST00000510362 PARP4Q9UKK3 1724 aaKnown RBP12.47□□□□□ -0.41
RETREG1-206ENST00000510362 FAM208AQ9UK61 1670 aaKnown RBP12.47□□□□□ -0.41
RETREG1-206ENST00000510362 SH3BP2P78314 561 aa12.46□□□□□ -0.41
RETREG1-206ENST00000510362 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
RETREG1-206ENST00000510362 LIAT1Q6ZQX7 453 aa12.46□□□□□ -0.41
RETREG1-206ENST00000510362 KRT27Q7Z3Y8 459 aa12.46□□□□□ -0.41
RETREG1-206ENST00000510362 PLSCR2Q9NRY7 297 aa12.46□□□□□ -0.41
RETREG1-206ENST00000510362 WDR17Q8IZU2 1322 aa12.45□□□□□ -0.42
RETREG1-206ENST00000510362 SH3RF1Q7Z6J0 888 aa12.45□□□□□ -0.42
RETREG1-206ENST00000510362 CCDC125Q86Z20 511 aa12.45□□□□□ -0.42
RETREG1-206ENST00000510362 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
RETREG1-206ENST00000510362 FOXJ1Q92949 421 aa12.45□□□□□ -0.42
RETREG1-206ENST00000510362 ARHGAP9Q9BRR9 750 aa12.45□□□□□ -0.42
RETREG1-206ENST00000510362 ANKRD26Q9UPS8 1709 aa12.45□□□□□ -0.42
RETREG1-206ENST00000510362 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
RETREG1-206ENST00000510362 NSD3Q9BZ95 1437 aa12.45□□□□□ -0.42
RETREG1-206ENST00000510362 USP35Q9P2H5 1018 aa12.44□□□□□ -0.42
RETREG1-206ENST00000510362 RGPD1P0DJD0 1748 aa12.43□□□□□ -0.42
RETREG1-206ENST00000510362 FYB1O15117 783 aa12.43□□□□□ -0.42
RETREG1-206ENST00000510362 SKOR1P84550 965 aa12.43□□□□□ -0.42
RETREG1-206ENST00000510362 C4orf48Q5BLP8 95 aa12.43□□□□□ -0.42
RETREG1-206ENST00000510362 TOM1L2Q6ZVM7 507 aa12.43□□□□□ -0.42
RETREG1-206ENST00000510362 ADAMTS19Q8TE59 1207 aa12.43□□□□□ -0.42
RETREG1-206ENST00000510362 POLR3GLQ9BT43 218 aa12.43□□□□□ -0.42
RETREG1-206ENST00000510362 LRRC37A3O60309 1634 aa12.42□□□□□ -0.42
RETREG1-206ENST00000510362 CSB-PGBD3P0DP91 1061 aa12.42□□□□□ -0.42
RETREG1-206ENST00000510362 AGERQ15109 404 aa12.42□□□□□ -0.42
RETREG1-206ENST00000510362 BPHLQ86WA6 291 aaPredicted RBP12.42□□□□□ -0.42
RETREG1-206ENST00000510362 GLMNQ92990 594 aa12.42□□□□□ -0.42
RETREG1-206ENST00000510362 RTL1A6NKG5 1358 aa12.42□□□□□ -0.42
RETREG1-206ENST00000510362 CCDC7Q96M83 1385 aa12.42□□□□□ -0.42
RETREG1-206ENST00000510362 CGNL1Q0VF96 1302 aa12.41□□□□□ -0.42
RETREG1-206ENST00000510362 MAGEB6P1A0A0J9YX57 407 aa12.41□□□□□ -0.42
RETREG1-206ENST00000510362 SLC19A1P41440 591 aa12.41□□□□□ -0.42
RETREG1-206ENST00000510362 WNT7BP56706 349 aa12.41□□□□□ -0.42
RETREG1-206ENST00000510362 ADAM32Q8TC27 787 aa12.41□□□□□ -0.42
RETREG1-206ENST00000510362 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms