RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 HABP4Q5JVS0 413 aaKnown RBP13.51□□□□□ -0.25
PTPN20-221ENST00000509599 GCC1Q96CN9 775 aa13.51□□□□□ -0.25
PTPN20-221ENST00000509599 PUS7Q96PZ0 661 aaKnown RBP13.51□□□□□ -0.25
PTPN20-221ENST00000509599 EYA1Q99502 592 aa13.51□□□□□ -0.25
PTPN20-221ENST00000509599 NARFQ9UHQ1 456 aa13.51□□□□□ -0.25
PTPN20-221ENST00000509599 BRPF1P55201 1214 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-221ENST00000509599 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
PTPN20-221ENST00000509599 AKAP11Q9UKA4 1901 aa13.49□□□□□ -0.25
PTPN20-221ENST00000509599 BCORQ6W2J9 1755 aa13.48□□□□□ -0.25
PTPN20-221ENST00000509599 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
PTPN20-221ENST00000509599 COL15A1P39059 1388 aa13.48□□□□□ -0.25
PTPN20-221ENST00000509599 FAM205CA6NFA0 338 aa13.48□□□□□ -0.25
PTPN20-221ENST00000509599 TRAF5O00463 557 aa13.48□□□□□ -0.25
PTPN20-221ENST00000509599 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
PTPN20-221ENST00000509599 CABP4P57796 275 aa13.48□□□□□ -0.25
PTPN20-221ENST00000509599 CIAPIN1Q6FI81 312 aa13.48□□□□□ -0.25
PTPN20-221ENST00000509599 PDE6BP35913 854 aa13.47□□□□□ -0.25
PTPN20-221ENST00000509599 PRPF40BQ6NWY9 871 aaKnown RBP13.47□□□□□ -0.25
PTPN20-221ENST00000509599 MICALL2Q8IY33 904 aa13.47□□□□□ -0.25
PTPN20-221ENST00000509599 ZNF710Q8N1W2 664 aa13.47□□□□□ -0.25
PTPN20-221ENST00000509599 CCDC24Q8N4L8 307 aa13.47□□□□□ -0.25
PTPN20-221ENST00000509599 BRIP1Q9BX63 1249 aa13.47□□□□□ -0.25
PTPN20-221ENST00000509599 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
PTPN20-221ENST00000509599 BICDL1Q6ZP65 573 aa13.46□□□□□ -0.25
PTPN20-221ENST00000509599 SAPCD2Q86UD0 394 aa13.46□□□□□ -0.25
PTPN20-221ENST00000509599 DNAJC10Q8IXB1 793 aa13.46□□□□□ -0.25
PTPN20-221ENST00000509599 HS3ST6Q96QI5 342 aa13.46□□□□□ -0.25
PTPN20-221ENST00000509599 SCN7AQ01118 1682 aa13.46□□□□□ -0.26
PTPN20-221ENST00000509599 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
PTPN20-221ENST00000509599 C7orf43Q8WVR3 580 aa13.45□□□□□ -0.26
PTPN20-221ENST00000509599 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
PTPN20-221ENST00000509599 ZIC5Q96T25 663 aa13.45□□□□□ -0.26
PTPN20-221ENST00000509599 FZD9O00144 591 aa13.44□□□□□ -0.26
PTPN20-221ENST00000509599 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
PTPN20-221ENST00000509599 FXR1P51114 621 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTPN20-221ENST00000509599 PRR5LQ6MZQ0 368 aa13.44□□□□□ -0.26
PTPN20-221ENST00000509599 SPNS2Q8IVW8 549 aa13.44□□□□□ -0.26
PTPN20-221ENST00000509599 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
PTPN20-221ENST00000509599 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-221ENST00000509599 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
PTPN20-221ENST00000509599 CYP19A1P11511 503 aaPredicted RBP13.43□□□□□ -0.26
PTPN20-221ENST00000509599 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
PTPN20-221ENST00000509599 STYK1Q6J9G0 422 aa13.43□□□□□ -0.26
PTPN20-221ENST00000509599 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
PTPN20-221ENST00000509599 GPC2Q8N158 579 aa13.43□□□□□ -0.26
PTPN20-221ENST00000509599 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
PTPN20-221ENST00000509599 HHIPL1Q96JK4 782 aa13.43□□□□□ -0.26
PTPN20-221ENST00000509599 MS4A4AQ96JQ5 239 aa13.43□□□□□ -0.26
PTPN20-221ENST00000509599 ZBTB1Q9Y2K1 713 aa13.43□□□□□ -0.26
PTPN20-221ENST00000509599 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
PTPN20-221ENST00000509599 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
PTPN20-221ENST00000509599 SRGNP10124 158 aa13.42□□□□□ -0.26
PTPN20-221ENST00000509599 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTPN20-221ENST00000509599 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
PTPN20-221ENST00000509599 COL4A5P29400 1685 aa13.42□□□□□ -0.26
PTPN20-221ENST00000509599 CUL9Q8IWT3 2517 aa13.42□□□□□ -0.26
PTPN20-221ENST00000509599 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
PTPN20-221ENST00000509599 CCDC93Q567U6 631 aa13.41□□□□□ -0.26
PTPN20-221ENST00000509599 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
PTPN20-221ENST00000509599 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
PTPN20-221ENST00000509599 MKI67P46013 3256 aaKnown RBP13.41□□□□□ -0.26
PTPN20-221ENST00000509599 DLL1O00548 723 aa13.4□□□□□ -0.26
PTPN20-221ENST00000509599 EPS15P42566 896 aa13.4□□□□□ -0.26
PTPN20-221ENST00000509599 SCNN1DP51172 638 aa13.4□□□□□ -0.26
PTPN20-221ENST00000509599 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.26
PTPN20-221ENST00000509599 OLFM4Q6UX06 510 aa13.4□□□□□ -0.26
PTPN20-221ENST00000509599 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
PTPN20-221ENST00000509599 CELF2O95319 508 aaKnown RBP13.39□□□□□ -0.27
PTPN20-221ENST00000509599 MTHFSP49914 203 aa13.39□□□□□ -0.27
PTPN20-221ENST00000509599 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
PTPN20-221ENST00000509599 TESK2Q96S53 571 aa13.39□□□□□ -0.27
PTPN20-221ENST00000509599 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
PTPN20-221ENST00000509599 HOXB1P14653 301 aaPredicted RBP13.38□□□□□ -0.27
PTPN20-221ENST00000509599 LMOD1P29536 600 aaPredicted RBP13.38□□□□□ -0.27
PTPN20-221ENST00000509599 IARSP41252 1262 aaKnown RBP13.38□□□□□ -0.27
PTPN20-221ENST00000509599 NOGQ13253 232 aa13.38□□□□□ -0.27
PTPN20-221ENST00000509599 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
PTPN20-221ENST00000509599 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
PTPN20-221ENST00000509599 GJA3Q9Y6H8 435 aa13.38□□□□□ -0.27
PTPN20-221ENST00000509599 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
PTPN20-221ENST00000509599 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
PTPN20-221ENST00000509599 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
PTPN20-221ENST00000509599 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
PTPN20-221ENST00000509599 PLEKHO1Q53GL0 409 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-221ENST00000509599 USP50Q70EL3 339 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-221ENST00000509599 CTU1Q7Z7A3 348 aaKnown RBP13.37□□□□□ -0.27
PTPN20-221ENST00000509599 SAGE1Q9NXZ1 904 aa13.37□□□□□ -0.27
PTPN20-221ENST00000509599 SZT2Q5T011 3432 aa13.37□□□□□ -0.27
PTPN20-221ENST00000509599 POLR2AP24928 1970 aaKnown RBP13.36□□□□□ -0.27
PTPN20-221ENST00000509599 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
PTPN20-221ENST00000509599 KRTAP3-3Q9BYR6 98 aa13.36□□□□□ -0.27
PTPN20-221ENST00000509599 KRTAP3-2Q9BYR7 98 aa13.36□□□□□ -0.27
PTPN20-221ENST00000509599 SNED1Q8TER0 1413 aa13.36□□□□□ -0.27
PTPN20-221ENST00000509599 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-221ENST00000509599 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
PTPN20-221ENST00000509599 EIF5P55010 431 aaKnown RBP13.35□□□□□ -0.27
PTPN20-221ENST00000509599 SYNE4Q8N205 404 aa13.35□□□□□ -0.27
PTPN20-221ENST00000509599 SIN3AQ96ST3 1273 aa13.35□□□□□ -0.27
PTPN20-221ENST00000509599 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-221ENST00000509599 RTKN2Q8IZC4 609 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms