RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 ZNF511Q8NB15 262 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 SIN3AQ96ST3 1273 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 STRN4Q9NRL3 753 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 DACH1Q9UI36 760 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 MON2Q7Z3U7 1717 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 POTECB2RU33 542 aa10.54□□□□□ -0.72
CCSER1-208ENST00000509109 EVA1CP58658 441 aa10.54□□□□□ -0.72
CCSER1-208ENST00000509109 CHRNA2Q15822 529 aa10.54□□□□□ -0.72
CCSER1-208ENST00000509109 HELBQ8NG08 1087 aaPredicted RBP10.54□□□□□ -0.72
CCSER1-208ENST00000509109 PARP4Q9UKK3 1724 aaKnown RBP10.54□□□□□ -0.72
CCSER1-208ENST00000509109 COL5A2P05997 1499 aaPredicted RBP10.54□□□□□ -0.72
CCSER1-208ENST00000509109 CAMTA1Q9Y6Y1 1673 aa10.53□□□□□ -0.72
CCSER1-208ENST00000509109 AVPP01185 164 aa10.53□□□□□ -0.72
CCSER1-208ENST00000509109 CABP1Q9NZU7 370 aa10.53□□□□□ -0.72
CCSER1-208ENST00000509109 DISP2A7MBM2 1401 aa10.52□□□□□ -0.73
CCSER1-208ENST00000509109 WNK3Q9BYP7 1800 aa10.52□□□□□ -0.73
CCSER1-208ENST00000509109 AXIN1O15169 862 aa10.52□□□□□ -0.73
CCSER1-208ENST00000509109 SIAH2O43255 324 aa10.52□□□□□ -0.73
CCSER1-208ENST00000509109 GCP02774 474 aa10.52□□□□□ -0.73
CCSER1-208ENST00000509109 DEFB132Q7Z7B7 95 aa10.52□□□□□ -0.73
CCSER1-208ENST00000509109 HPS1Q92902 700 aa10.52□□□□□ -0.73
CCSER1-208ENST00000509109 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
CCSER1-208ENST00000509109 ABCC6O95255 1503 aa10.52□□□□□ -0.73
CCSER1-208ENST00000509109 TTC21AQ8NDW8 1320 aa10.52□□□□□ -0.73
CCSER1-208ENST00000509109 LRP5O75197 1615 aa10.51□□□□□ -0.73
CCSER1-208ENST00000509109 CRB1P82279 1406 aa10.51□□□□□ -0.73
CCSER1-208ENST00000509109 CTDSPL2Q05D32 466 aa10.51□□□□□ -0.73
CCSER1-208ENST00000509109 TCP11L2Q8N4U5 519 aa10.51□□□□□ -0.73
CCSER1-208ENST00000509109 CARD11Q9BXL7 1154 aa10.51□□□□□ -0.73
CCSER1-208ENST00000509109 USP35Q9P2H5 1018 aa10.51□□□□□ -0.73
CCSER1-208ENST00000509109 TLL2Q9Y6L7 1015 aa10.51□□□□□ -0.73
CCSER1-208ENST00000509109 AATKQ6ZMQ8 1374 aa10.51□□□□□ -0.73
CCSER1-208ENST00000509109 PARD3Q8TEW0 1356 aa10.51□□□□□ -0.73
CCSER1-208ENST00000509109 USP54Q70EL1 1684 aa10.5□□□□□ -0.73
CCSER1-208ENST00000509109 CPSF1Q10570 1443 aaKnown RBP10.5□□□□□ -0.73
CCSER1-208ENST00000509109 C11orf95C9JLR9 678 aaPredicted RBP10.5□□□□□ -0.73
CCSER1-208ENST00000509109 PDE3BQ13370 1112 aa10.5□□□□□ -0.73
CCSER1-208ENST00000509109 FAM196AQ6ZSG2 479 aa10.5□□□□□ -0.73
CCSER1-208ENST00000509109 KCNH5Q8NCM2 988 aa10.5□□□□□ -0.73
CCSER1-208ENST00000509109 FOXJ1Q92949 421 aa10.5□□□□□ -0.73
CCSER1-208ENST00000509109 KTN1Q86UP2 1357 aaKnown RBP10.5□□□□□ -0.73
CCSER1-208ENST00000509109 LRRC37A3O60309 1634 aa10.49□□□□□ -0.73
CCSER1-208ENST00000509109 LARP1Q6PKG0 1096 aaKnown RBP10.49□□□□□ -0.73
CCSER1-208ENST00000509109 CRIPAKQ8N1N5 446 aa10.49□□□□□ -0.73
CCSER1-208ENST00000509109 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
CCSER1-208ENST00000509109 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.49□□□□□ -0.73
CCSER1-208ENST00000509109 RGPD3A6NKT7 1758 aaPredicted RBP10.48□□□□□ -0.73
CCSER1-208ENST00000509109 COL18A1P39060 1754 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 RGPD4Q7Z3J3 1758 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 ZBTB7CA1YPR0 619 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 AGERQ15109 404 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 CTC1Q2NKJ3 1217 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 WASF2Q9Y6W5 498 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 TTC21BQ7Z4L5 1316 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 OVOS2A0A0G2JMS6 1433 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 OVOS2A0A0J9YW53 1432 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 OVOS2Q6IE36 1432 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 NFAT5O94916 1531 aa10.48□□□□□ -0.73
CCSER1-208ENST00000509109 RREB1Q92766 1687 aa10.47□□□□□ -0.73
CCSER1-208ENST00000509109 LRRN4Q8WUT4 740 aa10.47□□□□□ -0.73
CCSER1-208ENST00000509109 NINLQ9Y2I6 1382 aa10.47□□□□□ -0.73
CCSER1-208ENST00000509109 LTN1O94822 1766 aa10.47□□□□□ -0.73
CCSER1-208ENST00000509109 RGPD5Q99666 1765 aa10.47□□□□□ -0.73
CCSER1-208ENST00000509109 VARSP26640 1264 aaKnown RBP10.46□□□□□ -0.73
CCSER1-208ENST00000509109 BRPF1P55201 1214 aaPredicted RBP10.46□□□□□ -0.73
CCSER1-208ENST00000509109 TRIM26Q12899 539 aaPredicted RBP10.46□□□□□ -0.73
CCSER1-208ENST00000509109 FAM182BQ5T319 152 aa10.46□□□□□ -0.73
CCSER1-208ENST00000509109 TOM1L2Q6ZVM7 507 aa10.46□□□□□ -0.73
CCSER1-208ENST00000509109 HDGFL2Q7Z4V5 671 aaPredicted RBP10.46□□□□□ -0.73
CCSER1-208ENST00000509109 CDCA7Q9BWT1 371 aaPredicted RBP10.46□□□□□ -0.73
CCSER1-208ENST00000509109 WDR17Q8IZU2 1322 aa10.46□□□□□ -0.73
CCSER1-208ENST00000509109 EDC4Q6P2E9 1401 aaKnown RBP10.46□□□□□ -0.74
CCSER1-208ENST00000509109 NUP188Q5SRE5 1749 aa10.45□□□□□ -0.74
CCSER1-208ENST00000509109 PEAK1Q9H792 1746 aa10.45□□□□□ -0.74
CCSER1-208ENST00000509109 AP1G2O75843 785 aa10.45□□□□□ -0.74
CCSER1-208ENST00000509109 TRIM37O94972 964 aa10.45□□□□□ -0.74
CCSER1-208ENST00000509109 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
CCSER1-208ENST00000509109 TERF2IPQ9NYB0 399 aa10.45□□□□□ -0.74
CCSER1-208ENST00000509109 GMPR2Q9P2T1 348 aaKnown RBP10.45□□□□□ -0.74
CCSER1-208ENST00000509109 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
CCSER1-208ENST00000509109 USP31Q70CQ4 1352 aa10.44□□□□□ -0.74
CCSER1-208ENST00000509109 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
CCSER1-208ENST00000509109 ARHGEF25Q86VW2 580 aa10.44□□□□□ -0.74
CCSER1-208ENST00000509109 TMC1Q8TDI8 760 aa10.44□□□□□ -0.74
CCSER1-208ENST00000509109 PUS7Q96PZ0 661 aaKnown RBP10.44□□□□□ -0.74
CCSER1-208ENST00000509109 SBF2Q86WG5 1849 aa10.44□□□□□ -0.74
CCSER1-208ENST00000509109 CD163L1Q9NR16 1453 aa10.43□□□□□ -0.74
CCSER1-208ENST00000509109 CCDC7Q96M83 1385 aa10.43□□□□□ -0.74
CCSER1-208ENST00000509109 APBA3O96018 575 aa10.43□□□□□ -0.74
CCSER1-208ENST00000509109 CSB-PGBD3P0DP91 1061 aa10.43□□□□□ -0.74
CCSER1-208ENST00000509109 ARID5BQ14865 1188 aa10.43□□□□□ -0.74
CCSER1-208ENST00000509109 DDB1Q16531 1140 aa10.43□□□□□ -0.74
CCSER1-208ENST00000509109 PPP2R2DQ66LE6 453 aa10.43□□□□□ -0.74
CCSER1-208ENST00000509109 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCSER1-208ENST00000509109 ARMC2Q8NEN0 867 aa10.42□□□□□ -0.74
CCSER1-208ENST00000509109 FAM174AQ8TBP5 190 aa10.42□□□□□ -0.74
CCSER1-208ENST00000509109 A0A1W2PP64 1363 aa10.41□□□□□ -0.74
CCSER1-208ENST00000509109 EZH2Q15910 746 aaKnown RBP10.41□□□□□ -0.74
CCSER1-208ENST00000509109 BPHLQ86WA6 291 aaPredicted RBP10.41□□□□□ -0.74
CCSER1-208ENST00000509109 PCMTD1Q96MG8 357 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms