RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 KDM2BQ8NHM5 1336 aa19.24■□□□□ 0.67
UBE2D3-228ENST00000508974 IBTKQ9P2D0 1353 aaPredicted RBP19.23■□□□□ 0.67
UBE2D3-228ENST00000508974 ZNF853P0CG23 659 aa19.23■□□□□ 0.67
UBE2D3-228ENST00000508974 CALD1Q05682 793 aaKnown RBP19.23■□□□□ 0.67
UBE2D3-228ENST00000508974 PPP1R42Q7Z4L9 355 aa19.23■□□□□ 0.67
UBE2D3-228ENST00000508974 TAOK3Q9H2K8 898 aa19.23■□□□□ 0.67
UBE2D3-228ENST00000508974 HOXB7P09629 217 aa19.22■□□□□ 0.67
UBE2D3-228ENST00000508974 RPGRQ92834 1020 aaKnown RBP19.22■□□□□ 0.67
UBE2D3-228ENST00000508974 RRAGCQ9HB90 399 aa19.22■□□□□ 0.67
UBE2D3-228ENST00000508974 PARP10Q53GL7 1025 aa19.21■□□□□ 0.67
UBE2D3-228ENST00000508974 CCDC93Q567U6 631 aa19.21■□□□□ 0.67
UBE2D3-228ENST00000508974 C3orf67Q6ZVT6 689 aa19.21■□□□□ 0.67
UBE2D3-228ENST00000508974 UTP14AQ9BVJ6 771 aaKnown RBP19.21■□□□□ 0.67
UBE2D3-228ENST00000508974 DBF4Q9UBU7 674 aaPredicted RBP19.21■□□□□ 0.67
UBE2D3-228ENST00000508974 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
UBE2D3-228ENST00000508974 SOGA3Q5TF21 947 aa19.2■□□□□ 0.66
UBE2D3-228ENST00000508974 C16orf71Q8IYS4 520 aaPredicted RBP19.2■□□□□ 0.66
UBE2D3-228ENST00000508974 C7orf43Q8WVR3 580 aa19.2■□□□□ 0.66
UBE2D3-228ENST00000508974 TSR2Q969E8 191 aaKnown RBP19.2■□□□□ 0.66
UBE2D3-228ENST00000508974 RIC1Q4ADV7 1423 aa19.19■□□□□ 0.66
UBE2D3-228ENST00000508974 TCERG1O14776 1098 aaKnown RBP19.19■□□□□ 0.66
UBE2D3-228ENST00000508974 ALDH1B1P30837 517 aa19.19■□□□□ 0.66
UBE2D3-228ENST00000508974 CRY2Q49AN0 593 aa19.19■□□□□ 0.66
UBE2D3-228ENST00000508974 HSP90AB3PQ58FF7 597 aa19.19■□□□□ 0.66
UBE2D3-228ENST00000508974 C8orf58Q8NAV2 365 aa19.19■□□□□ 0.66
UBE2D3-228ENST00000508974 ZC3H4Q9UPT8 1303 aaKnown RBP19.19■□□□□ 0.66
UBE2D3-228ENST00000508974 TOMM70O94826 608 aa19.18■□□□□ 0.66
UBE2D3-228ENST00000508974 TCIRG1Q13488 830 aa19.18■□□□□ 0.66
UBE2D3-228ENST00000508974 SLC51AQ86UW1 340 aa19.18■□□□□ 0.66
UBE2D3-228ENST00000508974 NLRP10Q86W26 655 aa19.18■□□□□ 0.66
UBE2D3-228ENST00000508974 SYNE4Q8N205 404 aa19.18■□□□□ 0.66
UBE2D3-228ENST00000508974 LTBP3Q9NS15 1303 aa19.18■□□□□ 0.66
UBE2D3-228ENST00000508974 TAF1P21675 1872 aa19.18■□□□□ 0.66
UBE2D3-228ENST00000508974 DDX60Q8IY21 1712 aaKnown RBP19.17■□□□□ 0.66
UBE2D3-228ENST00000508974 GLTPD2A6NH11 291 aa19.17■□□□□ 0.66
UBE2D3-228ENST00000508974 ANKRD13DQ6ZTN6 518 aa19.17■□□□□ 0.66
UBE2D3-228ENST00000508974 PLBD2Q8NHP8 589 aa19.17■□□□□ 0.66
UBE2D3-228ENST00000508974 PHAXQ9H814 394 aaKnown RBP19.17■□□□□ 0.66
UBE2D3-228ENST00000508974 ZNF277Q9NRM2 450 aaPredicted RBP19.17■□□□□ 0.66
UBE2D3-228ENST00000508974 HYPKQ9NX55 129 aa19.17■□□□□ 0.66
UBE2D3-228ENST00000508974 TRMT112Q9UI30 125 aaKnown RBP19.17■□□□□ 0.66
UBE2D3-228ENST00000508974 ATP5J2-PTCD1G3V325 749 aa19.16■□□□□ 0.66
UBE2D3-228ENST00000508974 HCLS1P14317 486 aaPredicted RBP19.16■□□□□ 0.66
UBE2D3-228ENST00000508974 WWC1Q8IX03 1113 aa19.16■□□□□ 0.66
UBE2D3-228ENST00000508974 FAM9BQ8IZU0 186 aa19.16■□□□□ 0.66
UBE2D3-228ENST00000508974 TSPYL6Q8N831 410 aa19.16■□□□□ 0.66
UBE2D3-228ENST00000508974 RBM17Q96I25 401 aaKnown RBP19.16■□□□□ 0.66
UBE2D3-228ENST00000508974 NLRP3Q96P20 1036 aa19.16■□□□□ 0.66
UBE2D3-228ENST00000508974 CEP350Q5VT06 3117 aa19.15■□□□□ 0.66
UBE2D3-228ENST00000508974 HSPA6P17066 643 aa19.15■□□□□ 0.66
UBE2D3-228ENST00000508974 FKBP4Q02790 459 aaKnown RBP eCLIP19.15■□□□□ 0.662e-9■■□□□ 12.2
UBE2D3-228ENST00000508974 PPEF1O14829 653 aaPredicted RBP19.14■□□□□ 0.65
UBE2D3-228ENST00000508974 RTL5Q5HYW3 569 aaPredicted RBP19.14■□□□□ 0.65
UBE2D3-228ENST00000508974 DPY19L2Q6NUT2 758 aa19.14■□□□□ 0.65
UBE2D3-228ENST00000508974 WDR90Q96KV7 1748 aa19.14■□□□□ 0.65
UBE2D3-228ENST00000508974 HOXA10P31260 410 aaPredicted RBP19.13■□□□□ 0.65
UBE2D3-228ENST00000508974 GOLGA2Q08379 1002 aa19.13■□□□□ 0.65
UBE2D3-228ENST00000508974 CCDC27Q2M243 656 aa19.13■□□□□ 0.65
UBE2D3-228ENST00000508974 RIC3Q7Z5B4 369 aa19.13■□□□□ 0.65
UBE2D3-228ENST00000508974 RTKN2Q8IZC4 609 aa19.13■□□□□ 0.65
UBE2D3-228ENST00000508974 SH3TC1Q8TE82 1336 aa19.13■□□□□ 0.65
UBE2D3-228ENST00000508974 RNF123Q5XPI4 1314 aa19.12■□□□□ 0.65
UBE2D3-228ENST00000508974 SLC10A5Q5PT55 438 aa19.12■□□□□ 0.65
UBE2D3-228ENST00000508974 RBM46Q8TBY0 533 aaKnown RBP19.12■□□□□ 0.65
UBE2D3-228ENST00000508974 CRAMP1Q96RY5 1269 aa19.12■□□□□ 0.65
UBE2D3-228ENST00000508974 SNED1Q8TER0 1413 aa19.11■□□□□ 0.65
UBE2D3-228ENST00000508974 ABCC4O15439 1325 aa19.11■□□□□ 0.65
UBE2D3-228ENST00000508974 DDNO94850 711 aaPredicted RBP19.11■□□□□ 0.65
UBE2D3-228ENST00000508974 VEGFAP15692 232 aaPredicted RBP19.11■□□□□ 0.65
UBE2D3-228ENST00000508974 C1QBPQ07021 282 aaKnown RBP19.11■□□□□ 0.65
UBE2D3-228ENST00000508974 CCDC30Q5VVM6 783 aa19.11■□□□□ 0.65
UBE2D3-228ENST00000508974 FAM89AQ96GI7 184 aa19.11■□□□□ 0.65
UBE2D3-228ENST00000508974 ISCA1Q9BUE6 129 aa19.11■□□□□ 0.65
UBE2D3-228ENST00000508974 IARSP41252 1262 aaKnown RBP19.1■□□□□ 0.65
UBE2D3-228ENST00000508974 MYD88Q99836 296 aa19.1■□□□□ 0.65
UBE2D3-228ENST00000508974 ZNF541Q9H0D2 1346 aa19.09■□□□□ 0.65
UBE2D3-228ENST00000508974 POTECB2RU33 542 aa19.09■□□□□ 0.65
UBE2D3-228ENST00000508974 TWISTNBQ3B726 338 aaPredicted RBP19.09■□□□□ 0.65
UBE2D3-228ENST00000508974 COL4A5P29400 1685 aa19.08■□□□□ 0.65
UBE2D3-228ENST00000508974 IL16Q14005 1332 aa19.07■□□□□ 0.64
UBE2D3-228ENST00000508974 FANCIQ9NVI1 1328 aa19.07■□□□□ 0.64
UBE2D3-228ENST00000508974 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
UBE2D3-228ENST00000508974 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
UBE2D3-228ENST00000508974 DDX46Q7L014 1031 aaKnown RBP19.07■□□□□ 0.64
UBE2D3-228ENST00000508974 PSMD1Q99460 953 aa19.07■□□□□ 0.64
UBE2D3-228ENST00000508974 STK31Q9BXU1 1019 aa19.07■□□□□ 0.64
UBE2D3-228ENST00000508974 TMX4Q9H1E5 349 aaPredicted RBP19.07■□□□□ 0.64
UBE2D3-228ENST00000508974 COL4A1P02462 1669 aa19.06■□□□□ 0.64
UBE2D3-228ENST00000508974 JARID2Q92833 1246 aaPredicted RBP19.06■□□□□ 0.64
UBE2D3-228ENST00000508974 DDX58O95786 925 aaKnown RBP19.05■□□□□ 0.64
UBE2D3-228ENST00000508974 HTRA3P83110 453 aa19.05■□□□□ 0.64
UBE2D3-228ENST00000508974 FSTL1Q12841 308 aa19.05■□□□□ 0.64
UBE2D3-228ENST00000508974 SMC1BQ8NDV3 1235 aa19.05■□□□□ 0.64
UBE2D3-228ENST00000508974 MAP3K2Q9Y2U5 619 aa19.05■□□□□ 0.64
UBE2D3-228ENST00000508974 ATP6V0A2Q9Y487 856 aa19.05■□□□□ 0.64
UBE2D3-228ENST00000508974 SCN4AP35499 1836 aa19.04■□□□□ 0.64
UBE2D3-228ENST00000508974 IRS4O14654 1257 aaPredicted RBP19.04■□□□□ 0.64
UBE2D3-228ENST00000508974 APLP1P51693 650 aa19.04■□□□□ 0.64
UBE2D3-228ENST00000508974 G2E3Q7L622 706 aa19.04■□□□□ 0.64
UBE2D3-228ENST00000508974 LARGE2Q8N3Y3 721 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms