RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 HOXB7P09629 217 aa28.73■■■□□ 2.19
PACRGL-220ENST00000508952 ZNF853P0CG23 659 aa28.73■■■□□ 2.19
PACRGL-220ENST00000508952 DUSP27Q5VZP5 1158 aa28.72■■■□□ 2.19
PACRGL-220ENST00000508952 C3orf67Q6ZVT6 689 aa28.72■■■□□ 2.19
PACRGL-220ENST00000508952 RPGRQ92834 1020 aaKnown RBP28.72■■■□□ 2.19
PACRGL-220ENST00000508952 UTP14AQ9BVJ6 771 aaKnown RBP28.71■■■□□ 2.19
PACRGL-220ENST00000508952 IFT57Q9NWB7 429 aa28.71■■■□□ 2.19
PACRGL-220ENST00000508952 WDR90Q96KV7 1748 aa28.69■■■□□ 2.18
PACRGL-220ENST00000508952 GNAI1P63096 354 aa28.69■■■□□ 2.18
PACRGL-220ENST00000508952 FKBP4Q02790 459 aaKnown RBP eCLIP28.69■■■□□ 2.18
PACRGL-220ENST00000508952 HSP90AB3PQ58FF7 597 aa28.69■■■□□ 2.18
PACRGL-220ENST00000508952 DPY19L2Q6NUT2 758 aa28.69■■■□□ 2.18
PACRGL-220ENST00000508952 VEGFAP15692 232 aaPredicted RBP28.68■■■□□ 2.18
PACRGL-220ENST00000508952 HOXA10P31260 410 aaPredicted RBP28.68■■■□□ 2.18
PACRGL-220ENST00000508952 CALD1Q05682 793 aaKnown RBP28.68■■■□□ 2.18
PACRGL-220ENST00000508952 NLRP10Q86W26 655 aa28.68■■■□□ 2.18
PACRGL-220ENST00000508952 ZNF277Q9NRM2 450 aaPredicted RBP28.68■■■□□ 2.18
PACRGL-220ENST00000508952 DBF4Q9UBU7 674 aaPredicted RBP28.68■■■□□ 2.18
PACRGL-220ENST00000508952 LAMB2P55268 1798 aa28.67■■■□□ 2.18
PACRGL-220ENST00000508952 TCIRG1Q13488 830 aa28.67■■■□□ 2.18
PACRGL-220ENST00000508952 RTKN2Q8IZC4 609 aa28.67■■■□□ 2.18
PACRGL-220ENST00000508952 POTECB2RU33 542 aa28.66■■■□□ 2.18
PACRGL-220ENST00000508952 SLC51AQ86UW1 340 aa28.66■■■□□ 2.18
PACRGL-220ENST00000508952 ZNF428Q96B54 188 aa28.66■■■□□ 2.18
PACRGL-220ENST00000508952 RBM17Q96I25 401 aaKnown RBP28.66■■■□□ 2.18
PACRGL-220ENST00000508952 SNED1Q8TER0 1413 aa28.66■■■□□ 2.18
PACRGL-220ENST00000508952 ELL2O00472 640 aaPredicted RBP28.65■■■□□ 2.18
PACRGL-220ENST00000508952 FSTL1Q12841 308 aa28.65■■■□□ 2.18
PACRGL-220ENST00000508952 SYNE4Q8N205 404 aa28.65■■■□□ 2.18
PACRGL-220ENST00000508952 NLRP3Q96P20 1036 aa28.65■■■□□ 2.18
PACRGL-220ENST00000508952 APLP1P51693 650 aa28.64■■■□□ 2.18
PACRGL-220ENST00000508952 SLC10A5Q5PT55 438 aa28.64■■■□□ 2.18
PACRGL-220ENST00000508952 PLBD2Q8NHP8 589 aa28.64■■■□□ 2.18
PACRGL-220ENST00000508952 CRAMP1Q96RY5 1269 aa28.64■■■□□ 2.18
PACRGL-220ENST00000508952 TCERG1O14776 1098 aaKnown RBP28.63■■■□□ 2.17
PACRGL-220ENST00000508952 ANP32CO43423 234 aa28.63■■■□□ 2.17
PACRGL-220ENST00000508952 DDNO94850 711 aaPredicted RBP28.63■■■□□ 2.17
PACRGL-220ENST00000508952 ANKRD13DQ6ZTN6 518 aa28.63■■■□□ 2.17
PACRGL-220ENST00000508952 MRS2Q9HD23 443 aa28.63■■■□□ 2.17
PACRGL-220ENST00000508952 HYPKQ9NX55 129 aa28.63■■■□□ 2.17
PACRGL-220ENST00000508952 TRMT112Q9UI30 125 aaKnown RBP28.63■■■□□ 2.17
PACRGL-220ENST00000508952 RNF123Q5XPI4 1314 aa28.63■■■□□ 2.17
PACRGL-220ENST00000508952 HCLS1P14317 486 aaPredicted RBP28.62■■■□□ 2.17
PACRGL-220ENST00000508952 PPEF1O14829 653 aaPredicted RBP28.61■■■□□ 2.17
PACRGL-220ENST00000508952 C8orf58Q8NAV2 365 aa28.61■■■□□ 2.17
PACRGL-220ENST00000508952 SMC1BQ8NDV3 1235 aa28.61■■■□□ 2.17
PACRGL-220ENST00000508952 IARSP41252 1262 aaKnown RBP28.6■■■□□ 2.17
PACRGL-220ENST00000508952 CC2D2BQ6DHV5 1058 aa28.59■■■□□ 2.17
PACRGL-220ENST00000508952 PSMD1Q99460 953 aa28.59■■■□□ 2.17
PACRGL-220ENST00000508952 SH3TC1Q8TE82 1336 aa28.59■■■□□ 2.17
PACRGL-220ENST00000508952 ZNF541Q9H0D2 1346 aa28.59■■■□□ 2.17
PACRGL-220ENST00000508952 DDX60Q8IY21 1712 aaKnown RBP28.58■■■□□ 2.17
PACRGL-220ENST00000508952 ATP5J2-PTCD1G3V325 749 aa28.58■■■□□ 2.17
PACRGL-220ENST00000508952 PHAXQ9H814 394 aaKnown RBP28.58■■■□□ 2.17
PACRGL-220ENST00000508952 ABCC4O15439 1325 aa28.58■■■□□ 2.17
PACRGL-220ENST00000508952 TSR2Q969E8 191 aaKnown RBP28.57■■■□□ 2.16
PACRGL-220ENST00000508952 ISCA1Q9BUE6 129 aa28.57■■■□□ 2.16
PACRGL-220ENST00000508952 COL4A5P29400 1685 aa28.57■■■□□ 2.16
PACRGL-220ENST00000508952 TAF1P21675 1872 aa28.56■■■□□ 2.16
PACRGL-220ENST00000508952 HTRA3P83110 453 aa28.56■■■□□ 2.16
PACRGL-220ENST00000508952 CCDC27Q2M243 656 aa28.55■■■□□ 2.16
PACRGL-220ENST00000508952 WWC1Q8IX03 1113 aa28.55■■■□□ 2.16
PACRGL-220ENST00000508952 TSPYL6Q8N831 410 aa28.55■■■□□ 2.16
PACRGL-220ENST00000508952 GOLGA2Q08379 1002 aa28.53■■■□□ 2.16
PACRGL-220ENST00000508952 RIC3Q7Z5B4 369 aa28.53■■■□□ 2.16
PACRGL-220ENST00000508952 FAM89AQ96GI7 184 aa28.53■■■□□ 2.16
PACRGL-220ENST00000508952 ATP6V0A2Q9Y487 856 aa28.53■■■□□ 2.16
PACRGL-220ENST00000508952 SCN4AP35499 1836 aa28.53■■■□□ 2.16
PACRGL-220ENST00000508952 FZD9O00144 591 aa28.52■■■□□ 2.16
PACRGL-220ENST00000508952 DNAJC5GQ8N7S2 189 aa28.52■■■□□ 2.16
PACRGL-220ENST00000508952 POTEIP0CG38 1075 aa28.51■■■□□ 2.15
PACRGL-220ENST00000508952 POTEJP0CG39 1038 aa28.51■■■□□ 2.15
PACRGL-220ENST00000508952 GRIPAP1Q4V328 841 aa28.51■■■□□ 2.15
PACRGL-220ENST00000508952 RTL5Q5HYW3 569 aaPredicted RBP28.51■■■□□ 2.15
PACRGL-220ENST00000508952 DDX46Q7L014 1031 aaKnown RBP28.51■■■□□ 2.15
PACRGL-220ENST00000508952 JDP2Q8WYK2 163 aa28.51■■■□□ 2.15
PACRGL-220ENST00000508952 L3MBTL3Q96JM7 780 aaPredicted RBP28.51■■■□□ 2.15
PACRGL-220ENST00000508952 CCDC30Q5VVM6 783 aa28.5■■■□□ 2.15
PACRGL-220ENST00000508952 TMX4Q9H1E5 349 aaPredicted RBP28.5■■■□□ 2.15
PACRGL-220ENST00000508952 LARGE2Q8N3Y3 721 aa28.49■■■□□ 2.15
PACRGL-220ENST00000508952 IQCA1LA6NCM1 817 aa28.48■■■□□ 2.15
PACRGL-220ENST00000508952 BBOX1O75936 387 aa28.48■■■□□ 2.15
PACRGL-220ENST00000508952 TRIM28Q13263 835 aaKnown RBP28.48■■■□□ 2.15
PACRGL-220ENST00000508952 GRAPQ13588 217 aa28.48■■■□□ 2.15
PACRGL-220ENST00000508952 GRAPLQ8TC17 118 aaPredicted RBP28.48■■■□□ 2.15
PACRGL-220ENST00000508952 MYD88Q99836 296 aa28.48■■■□□ 2.15
PACRGL-220ENST00000508952 SALL2Q9Y467 1007 aaPredicted RBP28.48■■■□□ 2.15
PACRGL-220ENST00000508952 TAF1DQ9H5J8 278 aaPredicted RBP28.47■■■□□ 2.15
PACRGL-220ENST00000508952 SP8Q8IXZ3 490 aa28.46■■■□□ 2.15
PACRGL-220ENST00000508952 IL16Q14005 1332 aa28.45■■■□□ 2.15
PACRGL-220ENST00000508952 IRS4O14654 1257 aaPredicted RBP28.45■■■□□ 2.14
PACRGL-220ENST00000508952 PPIP5K2O43314 1243 aa28.45■■■□□ 2.14
PACRGL-220ENST00000508952 CHADLQ6NUI6 762 aa28.45■■■□□ 2.14
PACRGL-220ENST00000508952 GPC2Q8N158 579 aa28.45■■■□□ 2.14
PACRGL-220ENST00000508952 CHMP4AQ9BY43 222 aa28.45■■■□□ 2.14
PACRGL-220ENST00000508952 COL4A1P02462 1669 aa28.45■■■□□ 2.14
PACRGL-220ENST00000508952 EIF6P56537 245 aaKnown RBP28.44■■■□□ 2.14
PACRGL-220ENST00000508952 AOC3Q16853 763 aa28.44■■■□□ 2.14
PACRGL-220ENST00000508952 TWISTNBQ3B726 338 aaPredicted RBP28.44■■■□□ 2.14
PACRGL-220ENST00000508952 NCBP3Q53F19 620 aaKnown RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms