RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
COL4A3BP-206ENST00000508809 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
COL4A3BP-206ENST00000508809 CYP27B1O15528 508 aa12.02□□□□□ -0.49
COL4A3BP-206ENST00000508809 NR1I2O75469 434 aa12.02□□□□□ -0.49
COL4A3BP-206ENST00000508809 TMF1P82094 1093 aa12.02□□□□□ -0.49
COL4A3BP-206ENST00000508809 AMHR2Q16671 573 aa12.02□□□□□ -0.49
COL4A3BP-206ENST00000508809 ITGB4P16144 1822 aa12.02□□□□□ -0.49
COL4A3BP-206ENST00000508809 C5P01031 1676 aa12.01□□□□□ -0.49
COL4A3BP-206ENST00000508809 GCGRP47871 477 aa12.01□□□□□ -0.49
COL4A3BP-206ENST00000508809 PCDH11XQ9BZA7 1347 aa12.01□□□□□ -0.49
COL4A3BP-206ENST00000508809 PCDH11YQ9BZA8 1340 aa12.01□□□□□ -0.49
COL4A3BP-206ENST00000508809 FLT4P35916 1363 aa12.01□□□□□ -0.49
COL4A3BP-206ENST00000508809 SMG6Q86US8 1419 aaKnown RBP12.01□□□□□ -0.49
COL4A3BP-206ENST00000508809 BLOC1S3Q6QNY0 202 aa12□□□□□ -0.49
COL4A3BP-206ENST00000508809 MPRIPQ6WCQ1 1025 aa12□□□□□ -0.49
COL4A3BP-206ENST00000508809 SMARCC1Q92922 1105 aaPredicted RBP12□□□□□ -0.49
COL4A3BP-206ENST00000508809 PALLDQ8WX93 1383 aa12□□□□□ -0.49
COL4A3BP-206ENST00000508809 CD46P15529 392 aa11.99□□□□□ -0.49
COL4A3BP-206ENST00000508809 MSL1Q68DK7 614 aa11.99□□□□□ -0.49
COL4A3BP-206ENST00000508809 NCAPD2Q15021 1401 aa11.99□□□□□ -0.49
COL4A3BP-206ENST00000508809 UBR3Q6ZT12 1888 aa11.98□□□□□ -0.49
COL4A3BP-206ENST00000508809 MAP2P11137 1827 aaKnown RBP11.98□□□□□ -0.49
COL4A3BP-206ENST00000508809 ZPR1O75312 459 aa11.98□□□□□ -0.49
COL4A3BP-206ENST00000508809 GGCXP38435 758 aa11.98□□□□□ -0.49
COL4A3BP-206ENST00000508809 CDCA8Q53HL2 280 aa11.98□□□□□ -0.49
COL4A3BP-206ENST00000508809 PIGBQ92521 554 aa11.98□□□□□ -0.49
COL4A3BP-206ENST00000508809 CARD14Q9BXL6 1004 aa11.98□□□□□ -0.49
COL4A3BP-206ENST00000508809 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
COL4A3BP-206ENST00000508809 FAM217BQ9NTX9 383 aaPredicted RBP11.98□□□□□ -0.49
COL4A3BP-206ENST00000508809 KIF20BQ96Q89 1820 aa11.97□□□□□ -0.49
COL4A3BP-206ENST00000508809 C4BP0C0L5 1744 aa11.97□□□□□ -0.49
COL4A3BP-206ENST00000508809 TOGARAM1Q9Y4F4 1720 aa11.97□□□□□ -0.49
COL4A3BP-206ENST00000508809 TRIM66O15016 1216 aa11.97□□□□□ -0.49
COL4A3BP-206ENST00000508809 ATP6V1AP38606 617 aa11.97□□□□□ -0.49
COL4A3BP-206ENST00000508809 AMIGO3Q86WK7 504 aa11.97□□□□□ -0.49
COL4A3BP-206ENST00000508809 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
COL4A3BP-206ENST00000508809 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
COL4A3BP-206ENST00000508809 USP46P62068 366 aa11.96□□□□□ -0.49
COL4A3BP-206ENST00000508809 FUT2Q10981 343 aa11.96□□□□□ -0.49
COL4A3BP-206ENST00000508809 ZNF516Q92618 1163 aa11.96□□□□□ -0.49
COL4A3BP-206ENST00000508809 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
COL4A3BP-206ENST00000508809 ATP10DQ9P241 1426 aa11.95□□□□□ -0.5
COL4A3BP-206ENST00000508809 ADCY9O60503 1353 aa11.95□□□□□ -0.5
COL4A3BP-206ENST00000508809 SSFA2P28290 1259 aa11.95□□□□□ -0.5
COL4A3BP-206ENST00000508809 LOC102724428A0A0B4J2F2 783 aa11.94□□□□□ -0.5
COL4A3BP-206ENST00000508809 KDM4AO75164 1064 aa11.94□□□□□ -0.5
COL4A3BP-206ENST00000508809 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
COL4A3BP-206ENST00000508809 SIK1P57059 783 aa11.94□□□□□ -0.5
COL4A3BP-206ENST00000508809 PUS10Q3MIT2 529 aaKnown RBP11.94□□□□□ -0.5
COL4A3BP-206ENST00000508809 NUTM1Q86Y26 1132 aa11.94□□□□□ -0.5
COL4A3BP-206ENST00000508809 TMUB1Q9BVT8 246 aa11.94□□□□□ -0.5
COL4A3BP-206ENST00000508809 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
COL4A3BP-206ENST00000508809 NSD3Q9BZ95 1437 aa11.94□□□□□ -0.5
COL4A3BP-206ENST00000508809 RGS20O76081 388 aa11.93□□□□□ -0.5
COL4A3BP-206ENST00000508809 GIGYF2Q6Y7W6 1299 aaKnown RBP11.93□□□□□ -0.5
COL4A3BP-206ENST00000508809 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
COL4A3BP-206ENST00000508809 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
COL4A3BP-206ENST00000508809 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
COL4A3BP-206ENST00000508809 ANKRD26Q9UPS8 1709 aa11.93□□□□□ -0.5
COL4A3BP-206ENST00000508809 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
COL4A3BP-206ENST00000508809 ITPK1Q13572 414 aa11.92□□□□□ -0.5
COL4A3BP-206ENST00000508809 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
COL4A3BP-206ENST00000508809 POLKQ9UBT6 870 aa11.92□□□□□ -0.5
COL4A3BP-206ENST00000508809 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
COL4A3BP-206ENST00000508809 PHKG2P15735 406 aa11.91□□□□□ -0.5
COL4A3BP-206ENST00000508809 PDE4DQ08499 809 aa11.91□□□□□ -0.5
COL4A3BP-206ENST00000508809 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
COL4A3BP-206ENST00000508809 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
COL4A3BP-206ENST00000508809 MORN1Q5T089 497 aa11.9□□□□□ -0.5
COL4A3BP-206ENST00000508809 SCUBE3Q8IX30 993 aa11.9□□□□□ -0.5
COL4A3BP-206ENST00000508809 PARP9Q8IXQ6 854 aa11.9□□□□□ -0.5
COL4A3BP-206ENST00000508809 ATG3Q9NT62 314 aa11.9□□□□□ -0.5
COL4A3BP-206ENST00000508809 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.5
COL4A3BP-206ENST00000508809 KIF13BQ9NQT8 1826 aa11.89□□□□□ -0.51
COL4A3BP-206ENST00000508809 ADH1BP00325 375 aa11.89□□□□□ -0.51
COL4A3BP-206ENST00000508809 HSPA6P17066 643 aa11.89□□□□□ -0.51
COL4A3BP-206ENST00000508809 Q3C1V9 767 aa11.89□□□□□ -0.51
COL4A3BP-206ENST00000508809 REPIN1Q9BWE0 567 aaKnown RBP11.89□□□□□ -0.51
COL4A3BP-206ENST00000508809 ERVV-2B6SEH9 535 aa11.88□□□□□ -0.51
COL4A3BP-206ENST00000508809 TGFB2P61812 414 aa11.88□□□□□ -0.51
COL4A3BP-206ENST00000508809 EIF4A2Q14240 407 aaKnown RBP11.88□□□□□ -0.51
COL4A3BP-206ENST00000508809 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
COL4A3BP-206ENST00000508809 NKX2-3Q8TAU0 364 aa11.88□□□□□ -0.51
COL4A3BP-206ENST00000508809 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
COL4A3BP-206ENST00000508809 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.88□□□□□ -0.51
COL4A3BP-206ENST00000508809 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
COL4A3BP-206ENST00000508809 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
COL4A3BP-206ENST00000508809 TLL1O43897 1013 aa11.87□□□□□ -0.51
COL4A3BP-206ENST00000508809 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
COL4A3BP-206ENST00000508809 MMP10P09238 476 aa11.87□□□□□ -0.51
COL4A3BP-206ENST00000508809 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
COL4A3BP-206ENST00000508809 TRAPPC3LQ5T215 181 aa11.87□□□□□ -0.51
COL4A3BP-206ENST00000508809 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
COL4A3BP-206ENST00000508809 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
COL4A3BP-206ENST00000508809 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
COL4A3BP-206ENST00000508809 PPP1R18Q6NYC8 613 aa11.86□□□□□ -0.51
COL4A3BP-206ENST00000508809 SPSB2Q99619 263 aa11.86□□□□□ -0.51
COL4A3BP-206ENST00000508809 SLC27A5Q9Y2P5 690 aa11.86□□□□□ -0.51
COL4A3BP-206ENST00000508809 RTCBQ9Y3I0 505 aaKnown RBP11.86□□□□□ -0.51
COL4A3BP-206ENST00000508809 KDRP35968 1356 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms