RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SENP2Q9HC62 589 aa7.83□□□□□ -1.16
HMGB1P44-201ENST00000508597 PCDHGA11Q9Y5H2 935 aa7.83□□□□□ -1.16
HMGB1P44-201ENST00000508597 STRCQ7RTU9 1775 aa7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 USP17L5A8MUK1 530 aa7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 NPHP4O75161 1426 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 IL2RAP01589 272 aa7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 LTKP29376 864 aa7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 CCDC125Q86Z20 511 aa7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 DCAF11Q8TEB1 546 aa7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 ZNF775Q96BV0 537 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 ARHGEF10LQ9HCE6 1279 aa7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 SERPINA10Q9UK55 444 aa7.82□□□□□ -1.16
HMGB1P44-201ENST00000508597 NRXN1Q9ULB1 1477 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 DIP2AQ14689 1571 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 SETBP1Q9Y6X0 1596 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 PALM3A6NDB9 673 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 TTLL8A6PVC2 850 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 ATP9BO43861 1147 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 UPP2O95045 317 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 USP4Q13107 963 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 MAP7D1Q3KQU3 841 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 L3MBTL2Q969R5 705 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 CCDC97Q96F63 343 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 PPP1R12CQ9BZL4 782 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 ETNK1Q9HBU6 452 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 TBX22Q9Y458 520 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 IQGAP1P46940 1657 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 PIK3R4Q99570 1358 aa7.81□□□□□ -1.16
HMGB1P44-201ENST00000508597 USP17L3A6NCW0 530 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 USP17L4A6NCW7 530 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 MEN1O00255 615 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 ZBTB7BO15156 539 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 SCNN1DP51172 638 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 LCE2CQ5TA81 110 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 USP17L2Q6R6M4 530 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 USP17L1Q7RTZ2 530 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 NFATC2IPQ8NCF5 419 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 KIFC2Q96AC6 838 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 ARID3AQ99856 593 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 POLMQ9NP87 494 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 KIAA1024Q9UPX6 916 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 HRH3Q9Y5N1 445 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 LAMC1P11047 1609 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 KIAA1210Q9ULL0 1709 aa7.8□□□□□ -1.16
HMGB1P44-201ENST00000508597 PIK3C2GO75747 1445 aa7.79□□□□□ -1.16
HMGB1P44-201ENST00000508597 MYCP01106 439 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P44-201ENST00000508597 VEGFBP49765 207 aa7.79□□□□□ -1.16
HMGB1P44-201ENST00000508597 RNF217Q8TC41 542 aa7.79□□□□□ -1.16
HMGB1P44-201ENST00000508597 C14orf93Q9H972 538 aaKnown RBP7.79□□□□□ -1.16
HMGB1P44-201ENST00000508597 MAFBQ9Y5Q3 323 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P44-201ENST00000508597 ADGRF5Q8IZF2 1346 aa7.78□□□□□ -1.16
HMGB1P44-201ENST00000508597 PRAG1Q86YV5 1406 aa7.78□□□□□ -1.16
HMGB1P44-201ENST00000508597 TMEM229AB2RXF0 380 aa7.78□□□□□ -1.16
HMGB1P44-201ENST00000508597 ZEB1P37275 1124 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P44-201ENST00000508597 CLDN10P78369 228 aa7.78□□□□□ -1.16
HMGB1P44-201ENST00000508597 CFAP70Q5T0N1 1121 aa7.78□□□□□ -1.16
HMGB1P44-201ENST00000508597 PRICKLE2Q7Z3G6 844 aa7.78□□□□□ -1.16
HMGB1P44-201ENST00000508597 CYP2U1Q7Z449 544 aa7.78□□□□□ -1.16
HMGB1P44-201ENST00000508597 ADAMTS13Q76LX8 1427 aa7.78□□□□□ -1.16
HMGB1P44-201ENST00000508597 MAN1A2O60476 641 aa7.77□□□□□ -1.17
HMGB1P44-201ENST00000508597 GNRH1P01148 92 aa7.77□□□□□ -1.17
HMGB1P44-201ENST00000508597 RNF144AP50876 292 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P44-201ENST00000508597 CLN3Q13286 438 aa7.77□□□□□ -1.17
HMGB1P44-201ENST00000508597 EML3Q32P44 896 aa7.77□□□□□ -1.17
HMGB1P44-201ENST00000508597 CNKSR1Q969H4 720 aa7.77□□□□□ -1.17
HMGB1P44-201ENST00000508597 XAGE2Q96GT9 111 aa7.77□□□□□ -1.17
HMGB1P44-201ENST00000508597 ALKQ9UM73 1620 aa7.77□□□□□ -1.17
HMGB1P44-201ENST00000508597 NRXN3Q9Y4C0 1643 aa7.77□□□□□ -1.17
HMGB1P44-201ENST00000508597 CHD2O14647 1828 aaKnown RBP7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 RHOQP17081 205 aa7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 KCNA6P17658 529 aa7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 LMOD1P29536 600 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 GTF2IP78347 998 aa7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 CENPCQ03188 943 aa7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 CDCA8Q53HL2 280 aa7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 PLEKHM2Q8IWE5 1019 aa7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 SIRT1Q96EB6 747 aa7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 GRIP2Q9C0E4 1043 aa7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 MKRN1Q9UHC7 482 aaKnown RBP7.76□□□□□ -1.17
HMGB1P44-201ENST00000508597 SENP3-EIF4A1A0A087X0R7 540 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 DKK1O94907 266 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 RFX1P22670 979 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 GDF10P55107 478 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 POU4F2Q12837 409 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 SLC26A8Q96RN1 970 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 ESYT1Q9BSJ8 1104 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 FHDC1Q9C0D6 1143 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 SERTAD1Q9UHV2 236 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 NOD1Q9Y239 953 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 USP3Q9Y6I4 520 aa7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 SETD1AO15047 1707 aaKnown RBP7.75□□□□□ -1.17
HMGB1P44-201ENST00000508597 LRPPRCP42704 1394 aaKnown RBP7.74□□□□□ -1.17
HMGB1P44-201ENST00000508597 ABCC11Q96J66 1382 aa7.74□□□□□ -1.17
HMGB1P44-201ENST00000508597 PTSQ03393 145 aa7.74□□□□□ -1.17
HMGB1P44-201ENST00000508597 TRPM1Q7Z4N2 1603 aa7.74□□□□□ -1.17
HMGB1P44-201ENST00000508597 CPS1P31327 1500 aa7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 GPRASP1Q5JY77 1395 aa7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 NWD1Q149M9 1564 aa7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 TECPR2O15040 1411 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms