RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 MED14O60244 1454 aa17.16■□□□□ 0.34
ATP2C1-214ENST00000508532 NEK1Q96PY6 1258 aa17.16■□□□□ 0.34
ATP2C1-214ENST00000508532 ZSCAN25Q6NSZ9 544 aa17.16■□□□□ 0.34
ATP2C1-214ENST00000508532 HYPKQ9NX55 129 aa17.16■□□□□ 0.34
ATP2C1-214ENST00000508532 PSME1Q06323 249 aa17.16■□□□□ 0.34
ATP2C1-214ENST00000508532 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
ATP2C1-214ENST00000508532 ERCC4Q92889 916 aaPredicted RBP17.16■□□□□ 0.34
ATP2C1-214ENST00000508532 QRICH2Q9H0J4 1663 aa17.16■□□□□ 0.34
ATP2C1-214ENST00000508532 GTF2F1P35269 517 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 NEMFO60524 1076 aa17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 TTLL5Q6EMB2 1281 aa17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 TMCO3Q6UWJ1 677 aa17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 RALYLQ86SE5 291 aaKnown RBP17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 LEO1Q8WVC0 666 aaPredicted RBP17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 ZBTB9Q96C00 473 aa17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 CFAP100Q494V2 611 aa17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 STAP2Q9UGK3 403 aa17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 ATP2B1P20020 1258 aa17.15■□□□□ 0.34
ATP2C1-214ENST00000508532 MYOM1P52179 1685 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 TULP4Q9NRJ4 1543 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 NAA30Q147X3 362 aaPredicted RBP17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 CHMP4CQ96CF2 233 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 LSG1Q9H089 658 aaKnown RBP17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 TPCN1Q9ULQ1 816 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 PLEKHO1Q53GL0 409 aaPredicted RBP17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 EFCAB6Q5THR3 1501 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 NR1I2O75469 434 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 OLFM4Q6UX06 510 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 CTAGE5O15320 804 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 JAK2O60674 1132 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 POLR3DP05423 398 aaPredicted RBP17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 ELF2Q15723 593 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 Q6ZUG5 572 aa17.14■□□□□ 0.33
ATP2C1-214ENST00000508532 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 DBF4Q9UBU7 674 aaPredicted RBP17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 RAB11FIP4Q86YS3 637 aa17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 MRVI1Q9Y6F6 885 aa17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 TTC41PQ6P2S7 1318 aa17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 KIF2AO00139 706 aaPredicted RBP17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 SLU7O95391 586 aaKnown RBP17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 VIRMAQ69YN4 1812 aaKnown RBP17.13■□□□□ 0.33
ATP2C1-214ENST00000508532 NOL10Q9BSC4 688 aaKnown RBP17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 CLSTN2Q9H4D0 955 aa17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 TRIM29Q14134 588 aa17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 GOLGA6L1Q8N7Z2 621 aa17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 GTF3C6Q969F1 213 aa17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 IL25Q9H293 177 aa17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 A0A087WWV3 80 aa17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 PES1O00541 588 aaKnown RBP17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 SLC27A2O14975 620 aa17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 ZNF215Q9UL58 517 aaPredicted RBP17.12■□□□□ 0.33
ATP2C1-214ENST00000508532 AOX1Q06278 1338 aa17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 CAVIN2O95810 425 aa17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 TRDNQ13061 729 aa17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 DDX46Q7L014 1031 aaKnown RBP17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 SYT10Q6XYQ8 523 aa17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 DNAI1Q9UI46 699 aa17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 SKIDA1Q1XH10 827 aa17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 NFXL1Q6ZNB6 911 aa17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 ZNF710Q8N1W2 664 aa17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 KLHDC4Q8TBB5 520 aa17.11■□□□□ 0.33
ATP2C1-214ENST00000508532 GSDMDP57764 484 aa17.1■□□□□ 0.33
ATP2C1-214ENST00000508532 BMS1Q14692 1282 aaKnown RBP17.1■□□□□ 0.33
ATP2C1-214ENST00000508532 CACTINQ8WUQ7 758 aaKnown RBP17.1■□□□□ 0.33
ATP2C1-214ENST00000508532 ZSCAN16Q9H4T2 348 aaPredicted RBP17.1■□□□□ 0.33
ATP2C1-214ENST00000508532 NDUFB9Q9Y6M9 179 aa17.1■□□□□ 0.33
ATP2C1-214ENST00000508532 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
ATP2C1-214ENST00000508532 HSP90AA4PQ58FG1 418 aa17.1■□□□□ 0.33
ATP2C1-214ENST00000508532 CHST3Q7LGC8 479 aa17.1■□□□□ 0.33
ATP2C1-214ENST00000508532 FKBP4Q02790 459 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 GLI2P10070 1586 aa17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 EDC3Q96F86 508 aaKnown RBP17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 TIGD1Q96MW7 591 aa17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 CALCOCO1Q9P1Z2 691 aa17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 LMOD1P29536 600 aaPredicted RBP17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 CCP110O43303 1012 aa17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 SLC3A2P08195 630 aaKnown RBP17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 ZSCAN20P17040 1043 aaPredicted RBP17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 TMEM87AQ8NBN3 555 aa17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 KCNF1Q9H3M0 494 aa17.09■□□□□ 0.33
ATP2C1-214ENST00000508532 MYD88Q99836 296 aa17.08■□□□□ 0.33
ATP2C1-214ENST00000508532 ZSWIM6Q9HCJ5 1215 aa17.08■□□□□ 0.33
ATP2C1-214ENST00000508532 SPTLC3Q9NUV7 552 aa17.08■□□□□ 0.33
ATP2C1-214ENST00000508532 RPS6KB1P23443 525 aa17.08■□□□□ 0.32
ATP2C1-214ENST00000508532 HMG20BQ9P0W2 317 aa17.08■□□□□ 0.32
ATP2C1-214ENST00000508532 ARHGAP29Q52LW3 1261 aa17.08■□□□□ 0.32
ATP2C1-214ENST00000508532 IFNKQ9P0W0 207 aa17.08■□□□□ 0.32
ATP2C1-214ENST00000508532 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
ATP2C1-214ENST00000508532 CCDC129Q6ZRS4 1044 aa17.08■□□□□ 0.32
ATP2C1-214ENST00000508532 ZSWIM4Q9H7M6 989 aa17.08■□□□□ 0.32
ATP2C1-214ENST00000508532 PRDM4Q9UKN5 801 aa17.08■□□□□ 0.32
ATP2C1-214ENST00000508532 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 C8orf76Q96K31 380 aa17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 ZCCHC11Q5TAX3 1644 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms