RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CD163Q86VB7 1156 aa8.33□□□□□ -1.08
PDLIM5-211ENST00000508531 TNFRSF25Q93038 417 aa8.33□□□□□ -1.08
PDLIM5-211ENST00000508531 KCNQ4P56696 695 aa8.32□□□□□ -1.08
PDLIM5-211ENST00000508531 NEUROD1Q13562 356 aa8.32□□□□□ -1.08
PDLIM5-211ENST00000508531 BTLAQ7Z6A9 289 aa8.32□□□□□ -1.08
PDLIM5-211ENST00000508531 BHMTQ93088 406 aa8.32□□□□□ -1.08
PDLIM5-211ENST00000508531 VRTNQ9H8Y1 702 aa8.32□□□□□ -1.08
PDLIM5-211ENST00000508531 FAM196BA6NMK8 535 aa8.31□□□□□ -1.08
PDLIM5-211ENST00000508531 M0R082 166 aa8.31□□□□□ -1.08
PDLIM5-211ENST00000508531 FURINP09958 794 aa8.31□□□□□ -1.08
PDLIM5-211ENST00000508531 ADH7P40394 386 aa8.31□□□□□ -1.08
PDLIM5-211ENST00000508531 C8orf86Q6ZUL3 223 aa8.31□□□□□ -1.08
PDLIM5-211ENST00000508531 ANKMY2Q8IV38 441 aa8.31□□□□□ -1.08
PDLIM5-211ENST00000508531 ZNF417Q8TAU3 575 aa8.31□□□□□ -1.08
PDLIM5-211ENST00000508531 ZNF587Q96SQ5 575 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-211ENST00000508531 K7ELQ4 463 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-211ENST00000508531 ALBP02768 609 aa8.3□□□□□ -1.08
PDLIM5-211ENST00000508531 TBC1D8BQ0IIM8 1120 aa8.3□□□□□ -1.08
PDLIM5-211ENST00000508531 HIF1AQ16665 826 aa8.3□□□□□ -1.08
PDLIM5-211ENST00000508531 STARD13Q9Y3M8 1113 aa8.3□□□□□ -1.08
PDLIM5-211ENST00000508531 SPATA31C1P0DKV0 1188 aa8.29□□□□□ -1.08
PDLIM5-211ENST00000508531 IGFBP4P22692 258 aa8.29□□□□□ -1.08
PDLIM5-211ENST00000508531 RTN1Q16799 776 aa8.29□□□□□ -1.08
PDLIM5-211ENST00000508531 MICALL1Q8N3F8 863 aa8.29□□□□□ -1.08
PDLIM5-211ENST00000508531 ZNF777Q9ULD5 760 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-211ENST00000508531 ARXQ96QS3 562 aa8.28□□□□□ -1.08
PDLIM5-211ENST00000508531 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
PDLIM5-211ENST00000508531 COL9A3Q14050 684 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-211ENST00000508531 CFAP70Q5T0N1 1121 aa8.27□□□□□ -1.09
PDLIM5-211ENST00000508531 UBE2OQ9C0C9 1292 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-211ENST00000508531 IGFLR1Q9H665 355 aa8.27□□□□□ -1.09
PDLIM5-211ENST00000508531 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
PDLIM5-211ENST00000508531 SPDYE3A6NKU9 549 aa8.26□□□□□ -1.09
PDLIM5-211ENST00000508531 TGFBR3LH3BV60 316 aa8.26□□□□□ -1.09
PDLIM5-211ENST00000508531 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
PDLIM5-211ENST00000508531 PRRT3Q5FWE3 981 aa8.26□□□□□ -1.09
PDLIM5-211ENST00000508531 IER5Q5VY09 327 aa8.26□□□□□ -1.09
PDLIM5-211ENST00000508531 PRDM6Q9NQX0 595 aa8.26□□□□□ -1.09
PDLIM5-211ENST00000508531 KLK14Q9P0G3 267 aa8.26□□□□□ -1.09
PDLIM5-211ENST00000508531 PNMA5Q96PV4 448 aa8.25□□□□□ -1.09
PDLIM5-211ENST00000508531 GSX2Q9BZM3 304 aa8.25□□□□□ -1.09
PDLIM5-211ENST00000508531 DMGDHQ9UI17 866 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-211ENST00000508531 NID1P14543 1247 aa8.24□□□□□ -1.09
PDLIM5-211ENST00000508531 RFX1P22670 979 aa8.24□□□□□ -1.09
PDLIM5-211ENST00000508531 DOC2BQ14184 412 aa8.24□□□□□ -1.09
PDLIM5-211ENST00000508531 C20orf204Q6ZNR8 217 aa8.24□□□□□ -1.09
PDLIM5-211ENST00000508531 SLC6A14Q9UN76 642 aa8.24□□□□□ -1.09
PDLIM5-211ENST00000508531 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-211ENST00000508531 NFKB1P19838 968 aa8.23□□□□□ -1.09
PDLIM5-211ENST00000508531 WEE1P30291 646 aa8.23□□□□□ -1.09
PDLIM5-211ENST00000508531 GATA4P43694 442 aa8.23□□□□□ -1.09
PDLIM5-211ENST00000508531 DGKZQ13574 1117 aa8.23□□□□□ -1.09
PDLIM5-211ENST00000508531 FAM200AQ8TCP9 573 aa8.23□□□□□ -1.09
PDLIM5-211ENST00000508531 QTRT2Q9H974 415 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-211ENST00000508531 DNAJB12Q9NXW2 375 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-211ENST00000508531 FOXO3O43524 673 aa8.22□□□□□ -1.09
PDLIM5-211ENST00000508531 LILRB5O75023 590 aa8.22□□□□□ -1.09
PDLIM5-211ENST00000508531 APBA3O96018 575 aa8.22□□□□□ -1.09
PDLIM5-211ENST00000508531 GRNP28799 593 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-211ENST00000508531 IDH3AP50213 366 aa8.22□□□□□ -1.09
PDLIM5-211ENST00000508531 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-211ENST00000508531 CCINQ13939 588 aa8.22□□□□□ -1.09
PDLIM5-211ENST00000508531 NUDT8Q8WV74 236 aa8.22□□□□□ -1.09
PDLIM5-211ENST00000508531 VTI1AQ96AJ9 217 aa8.22□□□□□ -1.09
PDLIM5-211ENST00000508531 EPB42P16452 691 aa8.21□□□□□ -1.1
PDLIM5-211ENST00000508531 TRAPPC3LQ5T215 181 aa8.21□□□□□ -1.1
PDLIM5-211ENST00000508531 EFCC1Q9HA90 598 aa8.21□□□□□ -1.1
PDLIM5-211ENST00000508531 JPH1Q9HDC5 661 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-211ENST00000508531 INPP5BP32019 993 aa8.2□□□□□ -1.1
PDLIM5-211ENST00000508531 GRIK4Q16099 956 aa8.2□□□□□ -1.1
PDLIM5-211ENST00000508531 KRT25Q7Z3Z0 450 aa8.2□□□□□ -1.1
PDLIM5-211ENST00000508531 NOVA2Q9UNW9 492 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-211ENST00000508531 ARSDP51689 593 aa8.19□□□□□ -1.1
PDLIM5-211ENST00000508531 C11orf91Q3C1V1 193 aa8.19□□□□□ -1.1
PDLIM5-211ENST00000508531 PSAPL1Q6NUJ1 521 aa8.19□□□□□ -1.1
PDLIM5-211ENST00000508531 NAGPAQ9UK23 515 aa8.19□□□□□ -1.1
PDLIM5-211ENST00000508531 MICAL2O94851 1124 aa8.18□□□□□ -1.1
PDLIM5-211ENST00000508531 MYO19Q96H55 970 aa8.18□□□□□ -1.1
PDLIM5-211ENST00000508531 SEMA6BQ9H3T3 888 aa8.18□□□□□ -1.1
PDLIM5-211ENST00000508531 PRIMPOLQ96LW4 560 aa8.17□□□□□ -1.1
PDLIM5-211ENST00000508531 NACC1Q96RE7 527 aa8.17□□□□□ -1.1
PDLIM5-211ENST00000508531 ZFATQ9P243 1243 aa8.17□□□□□ -1.1
PDLIM5-211ENST00000508531 LRFN2Q9ULH4 789 aa8.17□□□□□ -1.1
PDLIM5-211ENST00000508531 USP20Q9Y2K6 914 aa8.17□□□□□ -1.1
PDLIM5-211ENST00000508531 A0A0A0MRY4 1105 aa8.16□□□□□ -1.1
PDLIM5-211ENST00000508531 RGS9O75916 674 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-211ENST00000508531 CPB1P15086 417 aa8.16□□□□□ -1.1
PDLIM5-211ENST00000508531 ITGB7P26010 798 aa8.16□□□□□ -1.1
PDLIM5-211ENST00000508531 TARSP26639 723 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-211ENST00000508531 AFF1P51825 1210 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-211ENST00000508531 FKBP5Q13451 457 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-211ENST00000508531 FAM35AQ86V20 835 aa8.16□□□□□ -1.1
PDLIM5-211ENST00000508531 IFT43Q96FT9 208 aa8.16□□□□□ -1.1
PDLIM5-211ENST00000508531 PRMT3O60678 531 aa8.15□□□□□ -1.1
PDLIM5-211ENST00000508531 SASH3O75995 380 aa8.15□□□□□ -1.1
PDLIM5-211ENST00000508531 RARAP10276 462 aa8.15□□□□□ -1.1
PDLIM5-211ENST00000508531 MLLT1Q03111 559 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-211ENST00000508531 XP32Q5T750 250 aa8.15□□□□□ -1.1
PDLIM5-211ENST00000508531 DHX32Q7L7V1 743 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-211ENST00000508531 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.15□□□□□ -1.11e-6■■■■■ 99.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms