RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 USP17L13C9JLJ4 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 USP17L12C9JPN9 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 USP17L11C9JVI0 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 USP17L21D6R901 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 USP17L18D6R9N7 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 USP17L22D6RA61 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 USP17L17D6RBQ6 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 USP17L19D6RCP7 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 USP17L20D6RJB6 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 SPATA31C1P0DKV0 1188 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 USP17L24Q0WX57 530 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 HINFPQ9BQA5 517 aa10.24□□□□□ -0.77
LINC01088-203ENST00000507476 NEUROD1Q13562 356 aa10.23□□□□□ -0.77
LINC01088-203ENST00000507476 ANKMY2Q8IV38 441 aa10.23□□□□□ -0.77
LINC01088-203ENST00000507476 MICALL1Q8N3F8 863 aa10.23□□□□□ -0.77
LINC01088-203ENST00000507476 PRDM6Q9NQX0 595 aa10.23□□□□□ -0.77
LINC01088-203ENST00000507476 FAM196BA6NMK8 535 aa10.22□□□□□ -0.77
LINC01088-203ENST00000507476 LMOD1P29536 600 aaPredicted RBP10.22□□□□□ -0.77
LINC01088-203ENST00000507476 RTN1Q16799 776 aa10.22□□□□□ -0.77
LINC01088-203ENST00000507476 C20orf204Q6ZNR8 217 aa10.22□□□□□ -0.77
LINC01088-203ENST00000507476 BHMTQ93088 406 aa10.22□□□□□ -0.77
LINC01088-203ENST00000507476 BCS1LQ9Y276 419 aa10.22□□□□□ -0.77
LINC01088-203ENST00000507476 IGFBP4P22692 258 aa10.21□□□□□ -0.77
LINC01088-203ENST00000507476 ARXQ96QS3 562 aa10.21□□□□□ -0.77
LINC01088-203ENST00000507476 VRTNQ9H8Y1 702 aa10.21□□□□□ -0.77
LINC01088-203ENST00000507476 DMGDHQ9UI17 866 aaKnown RBP10.21□□□□□ -0.77
LINC01088-203ENST00000507476 NID1P14543 1247 aa10.2□□□□□ -0.78
LINC01088-203ENST00000507476 HIF1AQ16665 826 aa10.2□□□□□ -0.78
LINC01088-203ENST00000507476 IER5Q5VY09 327 aa10.2□□□□□ -0.78
LINC01088-203ENST00000507476 FAM229AH3BQW9 127 aa10.19□□□□□ -0.78
LINC01088-203ENST00000507476 TGFBR3LH3BV60 316 aa10.19□□□□□ -0.78
LINC01088-203ENST00000507476 SPDYE3A6NKU9 549 aa10.18□□□□□ -0.78
LINC01088-203ENST00000507476 GRNP28799 593 aaKnown RBP10.18□□□□□ -0.78
LINC01088-203ENST00000507476 DOC2BQ14184 412 aa10.18□□□□□ -0.78
LINC01088-203ENST00000507476 CFAP70Q5T0N1 1121 aa10.18□□□□□ -0.78
LINC01088-203ENST00000507476 GSX2Q9BZM3 304 aa10.18□□□□□ -0.78
LINC01088-203ENST00000507476 ITGB7P26010 798 aa10.17□□□□□ -0.78
LINC01088-203ENST00000507476 PRRT3Q5FWE3 981 aa10.17□□□□□ -0.78
LINC01088-203ENST00000507476 TBC1D8BQ0IIM8 1120 aa10.16□□□□□ -0.78
LINC01088-203ENST00000507476 UBE2OQ9C0C9 1292 aaKnown RBP10.16□□□□□ -0.78
LINC01088-203ENST00000507476 KLK14Q9P0G3 267 aa10.16□□□□□ -0.78
LINC01088-203ENST00000507476 SLC6A14Q9UN76 642 aa10.16□□□□□ -0.78
LINC01088-203ENST00000507476 WEE1P30291 646 aa10.15□□□□□ -0.78
LINC01088-203ENST00000507476 GATA4P43694 442 aa10.15□□□□□ -0.78
LINC01088-203ENST00000507476 IGFLR1Q9H665 355 aa10.15□□□□□ -0.78
LINC01088-203ENST00000507476 QTRT2Q9H974 415 aaKnown RBP10.15□□□□□ -0.78
LINC01088-203ENST00000507476 XP32Q5T750 250 aa10.14□□□□□ -0.79
LINC01088-203ENST00000507476 EFCC1Q9HA90 598 aa10.14□□□□□ -0.79
LINC01088-203ENST00000507476 ZNF777Q9ULD5 760 aaPredicted RBP10.14□□□□□ -0.79
LINC01088-203ENST00000507476 LILRB5O75023 590 aa10.13□□□□□ -0.79
LINC01088-203ENST00000507476 NFKB1P19838 968 aa10.13□□□□□ -0.79
LINC01088-203ENST00000507476 INPP5BP32019 993 aa10.13□□□□□ -0.79
LINC01088-203ENST00000507476 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
LINC01088-203ENST00000507476 CCINQ13939 588 aa10.13□□□□□ -0.79
LINC01088-203ENST00000507476 DNAJB12Q9NXW2 375 aaKnown RBP10.13□□□□□ -0.79
LINC01088-203ENST00000507476 NAGPAQ9UK23 515 aa10.13□□□□□ -0.79
LINC01088-203ENST00000507476 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.13□□□□□ -0.79
LINC01088-203ENST00000507476 FOXO3O43524 673 aa10.12□□□□□ -0.79
LINC01088-203ENST00000507476 IDH3AP50213 366 aa10.12□□□□□ -0.79
LINC01088-203ENST00000507476 DGKZQ13574 1117 aa10.12□□□□□ -0.79
LINC01088-203ENST00000507476 GRIK4Q16099 956 aa10.12□□□□□ -0.79
LINC01088-203ENST00000507476 APBA3O96018 575 aa10.11□□□□□ -0.79
LINC01088-203ENST00000507476 CDCA8Q53HL2 280 aa10.11□□□□□ -0.79
LINC01088-203ENST00000507476 NUDT8Q8WV74 236 aa10.11□□□□□ -0.79
LINC01088-203ENST00000507476 PNMA5Q96PV4 448 aa10.11□□□□□ -0.79
LINC01088-203ENST00000507476 SEMA6BQ9H3T3 888 aa10.11□□□□□ -0.79
LINC01088-203ENST00000507476 JPH1Q9HDC5 661 aaPredicted RBP10.1□□□□□ -0.79
LINC01088-203ENST00000507476 TRAPPC3LQ5T215 181 aa10.09□□□□□ -0.79
LINC01088-203ENST00000507476 PSAPL1Q6NUJ1 521 aa10.09□□□□□ -0.79
LINC01088-203ENST00000507476 FAM200AQ8TCP9 573 aa10.09□□□□□ -0.79
LINC01088-203ENST00000507476 MYO19Q96H55 970 aa10.09□□□□□ -0.79
LINC01088-203ENST00000507476 TPSG1Q9NRR2 321 aa10.09□□□□□ -0.79
LINC01088-203ENST00000507476 ZFATQ9P243 1243 aa10.09□□□□□ -0.79
LINC01088-203ENST00000507476 EPB42P16452 691 aa10.08□□□□□ -0.8
LINC01088-203ENST00000507476 AFF1P51825 1210 aaKnown RBP10.08□□□□□ -0.8
LINC01088-203ENST00000507476 RSPO4Q2I0M5 234 aaPredicted RBP10.08□□□□□ -0.8
LINC01088-203ENST00000507476 ILDR2Q71H61 639 aa10.08□□□□□ -0.8
LINC01088-203ENST00000507476 A0A0A0MRY4 1105 aa10.07□□□□□ -0.8
LINC01088-203ENST00000507476 MICAL2O94851 1124 aa10.07□□□□□ -0.8
LINC01088-203ENST00000507476 ARSDP51689 593 aa10.07□□□□□ -0.8
LINC01088-203ENST00000507476 C11orf91Q3C1V1 193 aa10.07□□□□□ -0.8
LINC01088-203ENST00000507476 NKAPLQ5M9Q1 402 aa10.07□□□□□ -0.8
LINC01088-203ENST00000507476 NACC1Q96RE7 527 aa10.07□□□□□ -0.8
LINC01088-203ENST00000507476 LRFN2Q9ULH4 789 aa10.07□□□□□ -0.8
LINC01088-203ENST00000507476 MAP3K6O95382 1288 aa10.06□□□□□ -0.8
LINC01088-203ENST00000507476 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
LINC01088-203ENST00000507476 Q8N3U1 123 aa10.06□□□□□ -0.8
LINC01088-203ENST00000507476 VTI1AQ96AJ9 217 aa10.06□□□□□ -0.8
LINC01088-203ENST00000507476 IFT43Q96FT9 208 aa10.06□□□□□ -0.8
LINC01088-203ENST00000507476 NOVA2Q9UNW9 492 aaKnown RBP10.06□□□□□ -0.8
LINC01088-203ENST00000507476 ZBTB42B2RXF5 422 aa10.05□□□□□ -0.8
LINC01088-203ENST00000507476 SELPP16109 830 aa10.05□□□□□ -0.8
LINC01088-203ENST00000507476 RFX1P22670 979 aa10.05□□□□□ -0.8
LINC01088-203ENST00000507476 TARSP26639 723 aaKnown RBP10.05□□□□□ -0.8
LINC01088-203ENST00000507476 OPLAHO14841 1288 aa10.04□□□□□ -0.8
LINC01088-203ENST00000507476 RGS9O75916 674 aaPredicted RBP10.04□□□□□ -0.8
LINC01088-203ENST00000507476 ELNP15502 786 aa10.04□□□□□ -0.8
LINC01088-203ENST00000507476 FKBP5Q13451 457 aaPredicted RBP10.04□□□□□ -0.8
LINC01088-203ENST00000507476 FAM35AQ86V20 835 aa10.04□□□□□ -0.8
LINC01088-203ENST00000507476 ZMIZ1Q9ULJ6 1067 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms