RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 PARP10Q53GL7 1025 aa20.74■□□□□ 0.91
SSBP2-207ENST00000507472 COPS6Q7L5N1 327 aa20.74■□□□□ 0.91
SSBP2-207ENST00000507472 PPP1R42Q7Z4L9 355 aa20.74■□□□□ 0.91
SSBP2-207ENST00000507472 PCNTO95613 3336 aa20.73■□□□□ 0.91
SSBP2-207ENST00000507472 AIMP1Q12904 312 aaKnown RBP20.73■□□□□ 0.91
SSBP2-207ENST00000507472 IFFO2Q5TF58 517 aa20.73■□□□□ 0.91
SSBP2-207ENST00000507472 C3orf67Q6ZVT6 689 aa20.73■□□□□ 0.91
SSBP2-207ENST00000507472 XAGE3Q8WTP9 111 aa20.73■□□□□ 0.91
SSBP2-207ENST00000507472 PRKRIP1Q9H875 184 aaPredicted RBP20.73■□□□□ 0.91
SSBP2-207ENST00000507472 POTEIP0CG38 1075 aa20.72■□□□□ 0.91
SSBP2-207ENST00000507472 POTEJP0CG39 1038 aa20.72■□□□□ 0.91
SSBP2-207ENST00000507472 IARSP41252 1262 aaKnown RBP20.72■□□□□ 0.91
SSBP2-207ENST00000507472 RBM17Q96I25 401 aaKnown RBP20.72■□□□□ 0.91
SSBP2-207ENST00000507472 CRAMP1Q96RY5 1269 aa20.72■□□□□ 0.91
SSBP2-207ENST00000507472 UTP14AQ9BVJ6 771 aaKnown RBP20.72■□□□□ 0.91
SSBP2-207ENST00000507472 SLC10A5Q5PT55 438 aa20.71■□□□□ 0.91
SSBP2-207ENST00000507472 CC2D2BQ6DHV5 1058 aa20.71■□□□□ 0.91
SSBP2-207ENST00000507472 CHADLQ6NUI6 762 aa20.71■□□□□ 0.91
SSBP2-207ENST00000507472 JMYQ8N9B5 988 aa20.71■□□□□ 0.91
SSBP2-207ENST00000507472 L3MBTL3Q96JM7 780 aaPredicted RBP20.71■□□□□ 0.91
SSBP2-207ENST00000507472 NLRP3Q96P20 1036 aa20.71■□□□□ 0.91
SSBP2-207ENST00000507472 PSMD1Q99460 953 aa20.71■□□□□ 0.91
SSBP2-207ENST00000507472 DDX21Q9NR30 783 aaKnown RBP eCLIP20.71■□□□□ 0.91
SSBP2-207ENST00000507472 ZNF541Q9H0D2 1346 aa20.71■□□□□ 0.91
SSBP2-207ENST00000507472 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
SSBP2-207ENST00000507472 IQCA1LA6NCM1 817 aa20.7■□□□□ 0.9
SSBP2-207ENST00000507472 TCERG1O14776 1098 aaKnown RBP20.7■□□□□ 0.9
SSBP2-207ENST00000507472 FZD9O00144 591 aa20.69■□□□□ 0.9
SSBP2-207ENST00000507472 SLC51AQ86UW1 340 aa20.69■□□□□ 0.9
SSBP2-207ENST00000507472 TAF1DQ9H5J8 278 aaPredicted RBP20.69■□□□□ 0.9
SSBP2-207ENST00000507472 SNED1Q8TER0 1413 aa20.69■□□□□ 0.9
SSBP2-207ENST00000507472 TCIRG1Q13488 830 aa20.68■□□□□ 0.9
SSBP2-207ENST00000507472 HSP90AB3PQ58FF7 597 aa20.68■□□□□ 0.9
SSBP2-207ENST00000507472 NLRP10Q86W26 655 aa20.68■□□□□ 0.9
SSBP2-207ENST00000507472 CHPF2Q9P2E5 772 aa20.68■□□□□ 0.9
SSBP2-207ENST00000507472 PPEF1O14829 653 aaPredicted RBP20.67■□□□□ 0.9
SSBP2-207ENST00000507472 GRIPAP1Q4V328 841 aa20.67■□□□□ 0.9
SSBP2-207ENST00000507472 JDP2Q8WYK2 163 aa20.67■□□□□ 0.9
SSBP2-207ENST00000507472 CFAP44Q96MT7 982 aa20.67■□□□□ 0.9
SSBP2-207ENST00000507472 HCLS1P14317 486 aaPredicted RBP20.66■□□□□ 0.9
SSBP2-207ENST00000507472 HDGFL1Q5TGJ6 251 aa20.66■□□□□ 0.9
SSBP2-207ENST00000507472 HACL1Q9UJ83 578 aa20.66■□□□□ 0.9
SSBP2-207ENST00000507472 APAF1O14727 1248 aa20.65■□□□□ 0.9
SSBP2-207ENST00000507472 HOXB7P09629 217 aa20.65■□□□□ 0.9
SSBP2-207ENST00000507472 LDHDQ86WU2 507 aa20.65■□□□□ 0.9
SSBP2-207ENST00000507472 ZNF428Q96B54 188 aa20.65■□□□□ 0.9
SSBP2-207ENST00000507472 TRMT112Q9UI30 125 aaKnown RBP20.65■□□□□ 0.9
SSBP2-207ENST00000507472 RNF123Q5XPI4 1314 aa20.64■□□□□ 0.89
SSBP2-207ENST00000507472 EAPPQ56P03 285 aaPredicted RBP20.64■□□□□ 0.89
SSBP2-207ENST00000507472 DUSP27Q5VZP5 1158 aa20.64■□□□□ 0.89
SSBP2-207ENST00000507472 GPC2Q8N158 579 aa20.64■□□□□ 0.89
SSBP2-207ENST00000507472 MBIPQ9NS73 344 aa20.64■□□□□ 0.89
SSBP2-207ENST00000507472 DBF4Q9UBU7 674 aaPredicted RBP20.64■□□□□ 0.89
SSBP2-207ENST00000507472 EPHX2P34913 555 aa20.63■□□□□ 0.89
SSBP2-207ENST00000507472 ANKRD13DQ6ZTN6 518 aa20.63■□□□□ 0.89
SSBP2-207ENST00000507472 LARGE2Q8N3Y3 721 aa20.63■□□□□ 0.89
SSBP2-207ENST00000507472 PLBD2Q8NHP8 589 aa20.63■□□□□ 0.89
SSBP2-207ENST00000507472 TMX4Q9H1E5 349 aaPredicted RBP20.63■□□□□ 0.89
SSBP2-207ENST00000507472 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
SSBP2-207ENST00000507472 ABCC4O15439 1325 aa20.62■□□□□ 0.89
SSBP2-207ENST00000507472 SH3TC1Q8TE82 1336 aa20.62■□□□□ 0.89
SSBP2-207ENST00000507472 BBOX1O75936 387 aa20.62■□□□□ 0.89
SSBP2-207ENST00000507472 ZNF853P0CG23 659 aa20.62■□□□□ 0.89
SSBP2-207ENST00000507472 EIF6P56537 245 aaKnown RBP20.62■□□□□ 0.89
SSBP2-207ENST00000507472 GJA3Q9Y6H8 435 aa20.62■□□□□ 0.89
SSBP2-207ENST00000507472 CREBZFQ9NS37 354 aa20.61■□□□□ 0.89
SSBP2-207ENST00000507472 HYPKQ9NX55 129 aa20.61■□□□□ 0.89
SSBP2-207ENST00000507472 CLEC11AQ9Y240 323 aa20.61■□□□□ 0.89
SSBP2-207ENST00000507472 COL4A5P29400 1685 aa20.61■□□□□ 0.89
SSBP2-207ENST00000507472 PASKQ96RG2 1323 aa20.6■□□□□ 0.89
SSBP2-207ENST00000507472 ITGBL1O95965 494 aaPredicted RBP20.6■□□□□ 0.89
SSBP2-207ENST00000507472 PNMA8AQ86V59 439 aaPredicted RBP20.6■□□□□ 0.89
SSBP2-207ENST00000507472 SCN4AP35499 1836 aa20.6■□□□□ 0.89
SSBP2-207ENST00000507472 ATP5J2-PTCD1G3V325 749 aa20.59■□□□□ 0.89
SSBP2-207ENST00000507472 PPIP5K2O43314 1243 aa20.59■□□□□ 0.89
SSBP2-207ENST00000507472 AOC3Q16853 763 aa20.59■□□□□ 0.89
SSBP2-207ENST00000507472 DDX46Q7L014 1031 aaKnown RBP20.59■□□□□ 0.89
SSBP2-207ENST00000507472 SP8Q8IXZ3 490 aa20.59■□□□□ 0.89
SSBP2-207ENST00000507472 ISCA1Q9BUE6 129 aa20.59■□□□□ 0.89
SSBP2-207ENST00000507472 ELL2O00472 640 aaPredicted RBP20.58■□□□□ 0.89
SSBP2-207ENST00000507472 NIM1KQ8IY84 436 aa20.58■□□□□ 0.89
SSBP2-207ENST00000507472 IFT57Q9NWB7 429 aa20.58■□□□□ 0.89
SSBP2-207ENST00000507472 GNAI1P63096 354 aa20.57■□□□□ 0.88
SSBP2-207ENST00000507472 CALD1Q05682 793 aaKnown RBP20.57■□□□□ 0.88
SSBP2-207ENST00000507472 MAP1SQ66K74 1059 aaPredicted RBP20.57■□□□□ 0.88
SSBP2-207ENST00000507472 FAM89AQ96GI7 184 aa20.57■□□□□ 0.88
SSBP2-207ENST00000507472 RTFDC1Q9BY42 306 aaPredicted RBP20.57■□□□□ 0.88
SSBP2-207ENST00000507472 VPS33BQ9H267 617 aa20.57■□□□□ 0.88
SSBP2-207ENST00000507472 MKRN1Q9UHC7 482 aaKnown RBP20.57■□□□□ 0.88
SSBP2-207ENST00000507472 EPS15P42566 896 aa20.56■□□□□ 0.88
SSBP2-207ENST00000507472 SCNN1DP51172 638 aa20.56■□□□□ 0.88
SSBP2-207ENST00000507472 GRAPQ13588 217 aa20.56■□□□□ 0.88
SSBP2-207ENST00000507472 COL13A1Q5TAT6 717 aaPredicted RBP20.56■□□□□ 0.88
SSBP2-207ENST00000507472 DPP8Q6V1X1 898 aaPredicted RBP20.56■□□□□ 0.88
SSBP2-207ENST00000507472 CNTROBQ8N137 903 aa20.56■□□□□ 0.88
SSBP2-207ENST00000507472 MPNDQ8N594 471 aa20.56■□□□□ 0.88
SSBP2-207ENST00000507472 SUPT20HQ8NEM7 779 aa20.56■□□□□ 0.88
SSBP2-207ENST00000507472 GRAPLQ8TC17 118 aaPredicted RBP20.56■□□□□ 0.88
SSBP2-207ENST00000507472 LMOD1P29536 600 aaPredicted RBP20.55■□□□□ 0.88
SSBP2-207ENST00000507472 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 365.6 ms