RNA–Protein interactions for RNA: ENST00000506832.6

GPATCH4-211, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-211ENST00000506832 SMC1BQ8NDV3 1235 aa16.71■□□□□ 0.27
GPATCH4-211ENST00000506832 C7orf43Q8WVR3 580 aa16.71■□□□□ 0.27
GPATCH4-211ENST00000506832 MBIPQ9NS73 344 aa16.71■□□□□ 0.27
GPATCH4-211ENST00000506832 ANKRD36CQ5JPF3 1778 aa16.7■□□□□ 0.26
GPATCH4-211ENST00000506832 KLRG2A4D1S0 409 aaPredicted RBP16.7■□□□□ 0.26
GPATCH4-211ENST00000506832 ALDH1B1P30837 517 aa16.7■□□□□ 0.26
GPATCH4-211ENST00000506832 UTP14AQ9BVJ6 771 aaKnown RBP16.7■□□□□ 0.26
GPATCH4-211ENST00000506832 BABAM1Q9NWV8 329 aa16.7■□□□□ 0.26
GPATCH4-211ENST00000506832 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
GPATCH4-211ENST00000506832 PPEF1O14829 653 aaPredicted RBP16.69■□□□□ 0.26
GPATCH4-211ENST00000506832 HCLS1P14317 486 aaPredicted RBP16.69■□□□□ 0.26
GPATCH4-211ENST00000506832 FSTL1Q12841 308 aa16.69■□□□□ 0.26
GPATCH4-211ENST00000506832 PARP10Q53GL7 1025 aa16.69■□□□□ 0.26
GPATCH4-211ENST00000506832 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
GPATCH4-211ENST00000506832 DUSP27Q5VZP5 1158 aa16.69■□□□□ 0.26
GPATCH4-211ENST00000506832 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
GPATCH4-211ENST00000506832 DDX21Q9NR30 783 aaKnown RBP eCLIP16.69■□□□□ 0.26
GPATCH4-211ENST00000506832 POTECB2RU33 542 aa16.68■□□□□ 0.26
GPATCH4-211ENST00000506832 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
GPATCH4-211ENST00000506832 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
GPATCH4-211ENST00000506832 CRY2Q49AN0 593 aa16.68■□□□□ 0.26
GPATCH4-211ENST00000506832 RBM17Q96I25 401 aaKnown RBP16.68■□□□□ 0.26
GPATCH4-211ENST00000506832 ATP5J2-PTCD1G3V325 749 aa16.67■□□□□ 0.26
GPATCH4-211ENST00000506832 IARSP41252 1262 aaKnown RBP16.67■□□□□ 0.26
GPATCH4-211ENST00000506832 EAPPQ56P03 285 aaPredicted RBP16.67■□□□□ 0.26
GPATCH4-211ENST00000506832 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
GPATCH4-211ENST00000506832 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
GPATCH4-211ENST00000506832 NLRP3Q96P20 1036 aa16.67■□□□□ 0.26
GPATCH4-211ENST00000506832 TRMT112Q9UI30 125 aaKnown RBP16.67■□□□□ 0.26
GPATCH4-211ENST00000506832 NLRP10Q86W26 655 aa16.66■□□□□ 0.26
GPATCH4-211ENST00000506832 LAMB2P55268 1798 aa16.66■□□□□ 0.26
GPATCH4-211ENST00000506832 RIC1Q4ADV7 1423 aa16.65■□□□□ 0.26
GPATCH4-211ENST00000506832 HSP90AB3PQ58FF7 597 aa16.65■□□□□ 0.26
GPATCH4-211ENST00000506832 GJA3Q9Y6H8 435 aa16.65■□□□□ 0.26
GPATCH4-211ENST00000506832 ABCC4O15439 1325 aa16.65■□□□□ 0.26
GPATCH4-211ENST00000506832 RNF123Q5XPI4 1314 aa16.65■□□□□ 0.26
GPATCH4-211ENST00000506832 TCIRG1Q13488 830 aa16.64■□□□□ 0.25
GPATCH4-211ENST00000506832 LARGE2Q8N3Y3 721 aa16.64■□□□□ 0.25
GPATCH4-211ENST00000506832 DBF4Q9UBU7 674 aaPredicted RBP16.64■□□□□ 0.25
GPATCH4-211ENST00000506832 SALL2Q9Y467 1007 aaPredicted RBP16.64■□□□□ 0.25
GPATCH4-211ENST00000506832 COL4A5P29400 1685 aa16.64■□□□□ 0.25
GPATCH4-211ENST00000506832 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
GPATCH4-211ENST00000506832 GNAI1P63096 354 aa16.63■□□□□ 0.25
GPATCH4-211ENST00000506832 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
GPATCH4-211ENST00000506832 TSR2Q969E8 191 aaKnown RBP16.63■□□□□ 0.25
GPATCH4-211ENST00000506832 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
GPATCH4-211ENST00000506832 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
GPATCH4-211ENST00000506832 IFT57Q9NWB7 429 aa16.63■□□□□ 0.25
GPATCH4-211ENST00000506832 SH3TC1Q8TE82 1336 aa16.63■□□□□ 0.25
GPATCH4-211ENST00000506832 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
GPATCH4-211ENST00000506832 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
GPATCH4-211ENST00000506832 PLBD2Q8NHP8 589 aa16.62■□□□□ 0.25
GPATCH4-211ENST00000506832 FAM89AQ96GI7 184 aa16.62■□□□□ 0.25
GPATCH4-211ENST00000506832 CRAMP1Q96RY5 1269 aa16.62■□□□□ 0.25
GPATCH4-211ENST00000506832 TMX4Q9H1E5 349 aaPredicted RBP16.62■□□□□ 0.25
GPATCH4-211ENST00000506832 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
GPATCH4-211ENST00000506832 SNED1Q8TER0 1413 aa16.62■□□□□ 0.25
GPATCH4-211ENST00000506832 PPIP5K2O43314 1243 aa16.61■□□□□ 0.25
GPATCH4-211ENST00000506832 HOXB7P09629 217 aa16.61■□□□□ 0.25
GPATCH4-211ENST00000506832 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
GPATCH4-211ENST00000506832 GOLGA2Q08379 1002 aa16.61■□□□□ 0.25
GPATCH4-211ENST00000506832 AOC3Q16853 763 aa16.61■□□□□ 0.25
GPATCH4-211ENST00000506832 CHADLQ6NUI6 762 aa16.61■□□□□ 0.25
GPATCH4-211ENST00000506832 RIC3Q7Z5B4 369 aa16.61■□□□□ 0.25
GPATCH4-211ENST00000506832 C8orf58Q8NAV2 365 aa16.61■□□□□ 0.25
GPATCH4-211ENST00000506832 TAF1P21675 1872 aa16.61■□□□□ 0.25
GPATCH4-211ENST00000506832 DDX60Q8IY21 1712 aaKnown RBP16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 IQCA1LA6NCM1 817 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 ANP32CO43423 234 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 ZNF853P0CG23 659 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 EIF6P56537 245 aaKnown RBP16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 DDX46Q7L014 1031 aaKnown RBP16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 NIM1KQ8IY84 436 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 DNAJC5GQ8N7S2 189 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 KLRG1Q96E93 195 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 PSMD1Q99460 953 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 MYD88Q99836 296 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 TAF1DQ9H5J8 278 aaPredicted RBP16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 HYPKQ9NX55 129 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 HACL1Q9UJ83 578 aa16.6■□□□□ 0.25
GPATCH4-211ENST00000506832 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
GPATCH4-211ENST00000506832 TSPYL6Q8N831 410 aa16.59■□□□□ 0.25
GPATCH4-211ENST00000506832 EPHX2P34913 555 aa16.58■□□□□ 0.24
GPATCH4-211ENST00000506832 DPP8Q6V1X1 898 aaPredicted RBP16.58■□□□□ 0.24
GPATCH4-211ENST00000506832 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
GPATCH4-211ENST00000506832 ATP6V0A2Q9Y487 856 aa16.58■□□□□ 0.24
GPATCH4-211ENST00000506832 COL4A1P02462 1669 aa16.57■□□□□ 0.24
GPATCH4-211ENST00000506832 FZD9O00144 591 aa16.57■□□□□ 0.24
GPATCH4-211ENST00000506832 GRAPQ13588 217 aa16.57■□□□□ 0.24
GPATCH4-211ENST00000506832 SLC10A5Q5PT55 438 aa16.57■□□□□ 0.24
GPATCH4-211ENST00000506832 GRAPLQ8TC17 118 aaPredicted RBP16.57■□□□□ 0.24
GPATCH4-211ENST00000506832 L3MBTL3Q96JM7 780 aaPredicted RBP16.57■□□□□ 0.24
GPATCH4-211ENST00000506832 ISCA1Q9BUE6 129 aa16.57■□□□□ 0.24
GPATCH4-211ENST00000506832 SCN4AP35499 1836 aa16.56■□□□□ 0.24
GPATCH4-211ENST00000506832 LMOD1P29536 600 aaPredicted RBP16.56■□□□□ 0.24
GPATCH4-211ENST00000506832 MAP1SQ66K74 1059 aaPredicted RBP16.56■□□□□ 0.24
GPATCH4-211ENST00000506832 LDHDQ86WU2 507 aa16.56■□□□□ 0.24
GPATCH4-211ENST00000506832 MKRN1Q9UHC7 482 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms