RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 RNF123Q5XPI4 1314 aa16.31■□□□□ 0.2
TCOF1-210ENST00000506767 TRIM27P14373 513 aa16.31■□□□□ 0.2
TCOF1-210ENST00000506767 CWF19L2Q2TBE0 894 aaKnown RBP16.31■□□□□ 0.2
TCOF1-210ENST00000506767 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
TCOF1-210ENST00000506767 UTP14AQ9BVJ6 771 aaKnown RBP16.31■□□□□ 0.2
TCOF1-210ENST00000506767 ABCC4O15439 1325 aa16.3■□□□□ 0.2
TCOF1-210ENST00000506767 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
TCOF1-210ENST00000506767 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
TCOF1-210ENST00000506767 SLC4A10Q6U841 1118 aa16.3■□□□□ 0.2
TCOF1-210ENST00000506767 CNBD1Q8NA66 436 aa16.3■□□□□ 0.2
TCOF1-210ENST00000506767 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
TCOF1-210ENST00000506767 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
TCOF1-210ENST00000506767 GCKRQ14397 625 aa16.29■□□□□ 0.2
TCOF1-210ENST00000506767 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
TCOF1-210ENST00000506767 NUTM1Q86Y26 1132 aa16.29■□□□□ 0.2
TCOF1-210ENST00000506767 ZBTB38Q8NAP3 1195 aaPredicted RBP16.29■□□□□ 0.2
TCOF1-210ENST00000506767 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
TCOF1-210ENST00000506767 TRMT112Q9UI30 125 aaKnown RBP16.29■□□□□ 0.2
TCOF1-210ENST00000506767 TNNQ9UQP3 1299 aa16.29■□□□□ 0.2
TCOF1-210ENST00000506767 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
TCOF1-210ENST00000506767 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
TCOF1-210ENST00000506767 PCCAP05165 728 aaPredicted RBP16.28■□□□□ 0.2
TCOF1-210ENST00000506767 ERFEQ4G0M1 354 aa16.28■□□□□ 0.2
TCOF1-210ENST00000506767 BRIP1Q9BX63 1249 aa16.28■□□□□ 0.2
TCOF1-210ENST00000506767 KIAA1551Q9HCM1 1747 aa16.28■□□□□ 0.2
TCOF1-210ENST00000506767 ABCC12Q96J65 1359 aa16.27■□□□□ 0.2
TCOF1-210ENST00000506767 SH3TC1Q8TE82 1336 aa16.27■□□□□ 0.2
TCOF1-210ENST00000506767 H7C1W4 665 aa16.27■□□□□ 0.2
TCOF1-210ENST00000506767 YY1P25490 414 aa16.27■□□□□ 0.2
TCOF1-210ENST00000506767 CCT4P50991 539 aaKnown RBP16.27■□□□□ 0.2
TCOF1-210ENST00000506767 ST5P78524 1137 aa16.27■□□□□ 0.2
TCOF1-210ENST00000506767 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
TCOF1-210ENST00000506767 SYNE4Q8N205 404 aa16.27■□□□□ 0.2
TCOF1-210ENST00000506767 CCDC24Q8N4L8 307 aa16.27■□□□□ 0.2
TCOF1-210ENST00000506767 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
TCOF1-210ENST00000506767 DDX60Q8IY21 1712 aaKnown RBP16.26■□□□□ 0.19
TCOF1-210ENST00000506767 KLRG2A4D1S0 409 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-210ENST00000506767 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-210ENST00000506767 CASP7P55210 303 aa16.26■□□□□ 0.19
TCOF1-210ENST00000506767 FHDC1Q9C0D6 1143 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-210ENST00000506767 LAMB2P55268 1798 aa16.26■□□□□ 0.19
TCOF1-210ENST00000506767 UTYO14607 1347 aa16.25■□□□□ 0.19
TCOF1-210ENST00000506767 CDHR2Q9BYE9 1310 aa16.25■□□□□ 0.19
TCOF1-210ENST00000506767 TNRC6CQ9HCJ0 1690 aaKnown RBP16.25■□□□□ 0.19
TCOF1-210ENST00000506767 NPHP1O15259 732 aa16.25■□□□□ 0.19
TCOF1-210ENST00000506767 PLIN1O60240 522 aa16.25■□□□□ 0.19
TCOF1-210ENST00000506767 TGFB2P61812 414 aa16.25■□□□□ 0.19
TCOF1-210ENST00000506767 DZIP1LQ8IYY4 767 aaKnown RBP16.25■□□□□ 0.19
TCOF1-210ENST00000506767 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
TCOF1-210ENST00000506767 RLBP1P12271 317 aa16.24■□□□□ 0.19
TCOF1-210ENST00000506767 PDE6BP35913 854 aa16.24■□□□□ 0.19
TCOF1-210ENST00000506767 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-210ENST00000506767 SYT17Q9BSW7 474 aa16.24■□□□□ 0.19
TCOF1-210ENST00000506767 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
TCOF1-210ENST00000506767 GRM8O00222 908 aa16.23■□□□□ 0.19
TCOF1-210ENST00000506767 IRS4O14654 1257 aaPredicted RBP16.23■□□□□ 0.19
TCOF1-210ENST00000506767 MS4A1P11836 297 aa16.23■□□□□ 0.19
TCOF1-210ENST00000506767 HCLS1P14317 486 aaPredicted RBP16.23■□□□□ 0.19
TCOF1-210ENST00000506767 RTL5Q5HYW3 569 aaPredicted RBP16.23■□□□□ 0.19
TCOF1-210ENST00000506767 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
TCOF1-210ENST00000506767 TMEM57Q8N5G2 664 aa16.23■□□□□ 0.19
TCOF1-210ENST00000506767 JARID2Q92833 1246 aaPredicted RBP16.23■□□□□ 0.19
TCOF1-210ENST00000506767 PDZRN3Q9UPQ7 1066 aa16.23■□□□□ 0.19
TCOF1-210ENST00000506767 NBPF7P0C2Y1 421 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-210ENST00000506767 KCNA3P22001 575 aa16.22■□□□□ 0.19
TCOF1-210ENST00000506767 CRY2Q49AN0 593 aa16.22■□□□□ 0.19
TCOF1-210ENST00000506767 C3orf67Q6ZVT6 689 aa16.22■□□□□ 0.19
TCOF1-210ENST00000506767 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
TCOF1-210ENST00000506767 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
TCOF1-210ENST00000506767 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
TCOF1-210ENST00000506767 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
TCOF1-210ENST00000506767 C9orf78Q9NZ63 289 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-210ENST00000506767 DLEC1Q9Y238 1755 aa16.22■□□□□ 0.19
TCOF1-210ENST00000506767 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-210ENST00000506767 PDE8AO60658 829 aa16.21■□□□□ 0.19
TCOF1-210ENST00000506767 SRGNP10124 158 aa16.21■□□□□ 0.19
TCOF1-210ENST00000506767 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.19
TCOF1-210ENST00000506767 RRP1P56182 461 aaKnown RBP16.21■□□□□ 0.19
TCOF1-210ENST00000506767 PDE3AQ14432 1141 aa16.21■□□□□ 0.19
TCOF1-210ENST00000506767 FTSJ3Q8IY81 847 aaKnown RBP16.21■□□□□ 0.19
TCOF1-210ENST00000506767 PANK1Q8TE04 598 aa16.21■□□□□ 0.19
TCOF1-210ENST00000506767 A0A0G2JLW4 131 aa16.2■□□□□ 0.18
TCOF1-210ENST00000506767 DPEP1P16444 411 aa16.2■□□□□ 0.18
TCOF1-210ENST00000506767 CHRNA5P30532 468 aa16.2■□□□□ 0.18
TCOF1-210ENST00000506767 SF3B3Q15393 1217 aaKnown RBP16.2■□□□□ 0.18
TCOF1-210ENST00000506767 C2CD5Q86YS7 1000 aa16.2■□□□□ 0.18
TCOF1-210ENST00000506767 BRCA1P38398 1863 aaKnown RBP16.2■□□□□ 0.18
TCOF1-210ENST00000506767 H0YIN7 160 aa16.19■□□□□ 0.18
TCOF1-210ENST00000506767 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
TCOF1-210ENST00000506767 KAZALD1Q96I82 304 aa16.19■□□□□ 0.18
TCOF1-210ENST00000506767 MYH3P11055 1940 aa16.19■□□□□ 0.18
TCOF1-210ENST00000506767 CSF1RP07333 972 aa16.18■□□□□ 0.18
TCOF1-210ENST00000506767 NPR1P16066 1061 aa16.18■□□□□ 0.18
TCOF1-210ENST00000506767 HOXA10P31260 410 aaPredicted RBP16.18■□□□□ 0.18
TCOF1-210ENST00000506767 FOXO4P98177 505 aa16.18■□□□□ 0.18
TCOF1-210ENST00000506767 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
TCOF1-210ENST00000506767 MASTLQ96GX5 879 aa16.18■□□□□ 0.18
TCOF1-210ENST00000506767 SUCLG2Q96I99 432 aa16.18■□□□□ 0.18
TCOF1-210ENST00000506767 MEIS3Q99687 375 aa16.18■□□□□ 0.18
TCOF1-210ENST00000506767 ZBTB7BO15156 539 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms