RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 ZBTB3Q9H5J0 574 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 BIN2Q9UBW5 565 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-207ENST00000506687 ZMIZ1Q9ULJ6 1067 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 NFAT5O94916 1531 aa6.61□□□□□ -1.35
CPNE4-207ENST00000506687 NPC1L1Q9UHC9 1359 aa6.61□□□□□ -1.35
CPNE4-207ENST00000506687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.61□□□□□ -1.35
CPNE4-207ENST00000506687 CCDC85CA6NKD9 419 aa6.61□□□□□ -1.35
CPNE4-207ENST00000506687 ELOAQ14241 798 aaKnown RBP6.61□□□□□ -1.35
CPNE4-207ENST00000506687 SULF1Q8IWU6 871 aa6.61□□□□□ -1.35
CPNE4-207ENST00000506687 KCNH5Q8NCM2 988 aa6.61□□□□□ -1.35
CPNE4-207ENST00000506687 LRRN4Q8WUT4 740 aa6.61□□□□□ -1.35
CPNE4-207ENST00000506687 GGNBP2Q9H3C7 697 aa6.61□□□□□ -1.35
CPNE4-207ENST00000506687 NOVA2Q9UNW9 492 aaKnown RBP6.61□□□□□ -1.35
CPNE4-207ENST00000506687 COL18A1P39060 1754 aa6.61□□□□□ -1.35
CPNE4-207ENST00000506687 PHRF1Q9P1Y6 1649 aaKnown RBP6.61□□□□□ -1.35
CPNE4-207ENST00000506687 CGNL1Q0VF96 1302 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 ANKRD33BA6NCL7 494 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 RCCD1A6NED2 376 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 FBLN1P23142 703 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 SSFA2P28290 1259 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 SERPINB4P48594 390 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 TTC13Q8NBP0 860 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 TSC1Q92574 1164 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 AIDAQ96BJ3 306 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 CDCA7Q9BWT1 371 aaPredicted RBP6.6□□□□□ -1.35
CPNE4-207ENST00000506687 TFCP2L1Q9NZI6 479 aa6.6□□□□□ -1.35
CPNE4-207ENST00000506687 CRB1P82279 1406 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 C10orf71Q711Q0 1435 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 PAPPAQ13219 1627 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 C6orf132Q5T0Z8 1188 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 EPS8L1Q8TE68 723 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 COG3Q96JB2 828 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 LRRC4BQ9NT99 713 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 AXIN2Q9Y2T1 843 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 KNSTRNQ9Y448 316 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 KIF20BQ96Q89 1820 aa6.59□□□□□ -1.35
CPNE4-207ENST00000506687 PARP4Q9UKK3 1724 aaKnown RBP6.59□□□□□ -1.36
CPNE4-207ENST00000506687 LMO7Q8WWI1 1683 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 NSD2O96028 1365 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 MAP3K19Q56UN5 1328 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 IGSF1Q8N6C5 1336 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 KDM2BQ8NHM5 1336 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 DDX10Q13206 875 aaKnown RBP6.58□□□□□ -1.36
CPNE4-207ENST00000506687 NAALADL2Q58DX5 795 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 SLC27A3Q5K4L6 730 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 NPAS4Q8IUM7 802 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 UBXN4Q92575 508 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 OCEL1Q9H607 264 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 CWC22Q9HCG8 908 aaKnown RBP6.58□□□□□ -1.36
CPNE4-207ENST00000506687 POLKQ9UBT6 870 aa6.58□□□□□ -1.36
CPNE4-207ENST00000506687 ANKRD26Q9UPS8 1709 aa6.57□□□□□ -1.36
CPNE4-207ENST00000506687 LBX1P52954 281 aa6.57□□□□□ -1.36
CPNE4-207ENST00000506687 HELBQ8NG08 1087 aaPredicted RBP6.57□□□□□ -1.36
CPNE4-207ENST00000506687 IP6K1Q92551 441 aa6.57□□□□□ -1.36
CPNE4-207ENST00000506687 RBM27Q9P2N5 1060 aaKnown RBP6.57□□□□□ -1.36
CPNE4-207ENST00000506687 MAP2P11137 1827 aaKnown RBP6.57□□□□□ -1.36
CPNE4-207ENST00000506687 ABCC6O95255 1503 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 PXDNLA1KZ92 1463 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 COL5A2P05997 1499 aaPredicted RBP6.56□□□□□ -1.36
CPNE4-207ENST00000506687 FDX1P10109 184 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 NCLP19338 710 aaKnown RBP6.56□□□□□ -1.36
CPNE4-207ENST00000506687 VAMP1P23763 118 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 HOXC9P31274 260 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 PRSS12P56730 875 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 IRX5P78411 483 aaPredicted RBP6.56□□□□□ -1.36
CPNE4-207ENST00000506687 RRS1Q15050 365 aaKnown RBP6.56□□□□□ -1.36
CPNE4-207ENST00000506687 RRAGCQ9HB90 399 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 RGPD5Q99666 1765 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 COL24A1Q17RW2 1714 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 KIF24Q5T7B8 1368 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 PLEKHG2Q9H7P9 1386 aa6.56□□□□□ -1.36
CPNE4-207ENST00000506687 LTN1O94822 1766 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 PIK3CDO00329 1044 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 EXOC5O00471 708 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 KDM4AO75164 1064 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 TAGLNQ01995 201 aaKnown RBP6.55□□□□□ -1.36
CPNE4-207ENST00000506687 SF3A1Q15459 793 aaKnown RBP6.55□□□□□ -1.36
CPNE4-207ENST00000506687 HSP90AB2PQ58FF8 381 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 CC2D1BQ5T0F9 858 aaKnown RBP6.55□□□□□ -1.36
CPNE4-207ENST00000506687 TOM1L2Q6ZVM7 507 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 MORC1Q86VD1 984 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 ANKRD13AQ8IZ07 590 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 PNMA1Q8ND90 353 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 CDCA7LQ96GN5 454 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 EMILIN1Q9Y6C2 1016 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 SMG6Q86US8 1419 aaKnown RBP6.55□□□□□ -1.36
CPNE4-207ENST00000506687 RTL1A6NKG5 1358 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 INSRP06213 1382 aa6.55□□□□□ -1.36
CPNE4-207ENST00000506687 LRRC37A3O60309 1634 aa6.54□□□□□ -1.36
CPNE4-207ENST00000506687 CICQ96RK0 1608 aaPredicted RBP6.54□□□□□ -1.36
CPNE4-207ENST00000506687 SCNN1AP37088 669 aa6.54□□□□□ -1.36
CPNE4-207ENST00000506687 MSL1Q68DK7 614 aa6.54□□□□□ -1.36
CPNE4-207ENST00000506687 DHX37Q8IY37 1157 aaKnown RBP6.54□□□□□ -1.36
CPNE4-207ENST00000506687 RDH13Q8NBN7 331 aa6.54□□□□□ -1.36
CPNE4-207ENST00000506687 ACSBG1Q96GR2 724 aa6.54□□□□□ -1.36
CPNE4-207ENST00000506687 WBP1LQ9NX94 342 aa6.54□□□□□ -1.36
CPNE4-207ENST00000506687 MKRN1Q9UHC7 482 aaKnown RBP6.54□□□□□ -1.36
CPNE4-207ENST00000506687 ERBB3P21860 1342 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 WDR17Q8IZU2 1322 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 ANKRD62A6NC57 917 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms