RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RTKN2Q8IZC4 609 aa18.78■□□□□ 0.6
CDC42SE2-209ENST00000506419 SYNE4Q8N205 404 aa18.78■□□□□ 0.6
CDC42SE2-209ENST00000506419 UTP14AQ9BVJ6 771 aaKnown RBP18.78■□□□□ 0.6
CDC42SE2-209ENST00000506419 CHPF2Q9P2E5 772 aa18.78■□□□□ 0.6
CDC42SE2-209ENST00000506419 TCIRG1Q13488 830 aa18.77■□□□□ 0.6
CDC42SE2-209ENST00000506419 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
CDC42SE2-209ENST00000506419 NLRP10Q86W26 655 aa18.77■□□□□ 0.6
CDC42SE2-209ENST00000506419 FER1L6Q2WGJ9 1857 aa18.77■□□□□ 0.6
CDC42SE2-209ENST00000506419 IBTKQ9P2D0 1353 aaPredicted RBP18.77■□□□□ 0.6
CDC42SE2-209ENST00000506419 NUP98P52948 1817 aa18.77■□□□□ 0.59
CDC42SE2-209ENST00000506419 ZEB1P37275 1124 aaPredicted RBP18.76■□□□□ 0.59
CDC42SE2-209ENST00000506419 HDGFL1Q5TGJ6 251 aa18.76■□□□□ 0.59
CDC42SE2-209ENST00000506419 CRAMP1Q96RY5 1269 aa18.76■□□□□ 0.59
CDC42SE2-209ENST00000506419 HOXB7P09629 217 aa18.75■□□□□ 0.59
CDC42SE2-209ENST00000506419 SMC1BQ8NDV3 1235 aa18.75■□□□□ 0.59
CDC42SE2-209ENST00000506419 RPGRQ92834 1020 aaKnown RBP18.75■□□□□ 0.59
CDC42SE2-209ENST00000506419 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
CDC42SE2-209ENST00000506419 RBM17Q96I25 401 aaKnown RBP18.75■□□□□ 0.59
CDC42SE2-209ENST00000506419 NLRP3Q96P20 1036 aa18.75■□□□□ 0.59
CDC42SE2-209ENST00000506419 CCDC88AQ3V6T2 1871 aa18.74■□□□□ 0.59
CDC42SE2-209ENST00000506419 TCERG1O14776 1098 aaKnown RBP18.74■□□□□ 0.59
CDC42SE2-209ENST00000506419 HCLS1P14317 486 aaPredicted RBP18.74■□□□□ 0.59
CDC42SE2-209ENST00000506419 HSP90AB3PQ58FF7 597 aa18.74■□□□□ 0.59
CDC42SE2-209ENST00000506419 IFT57Q9NWB7 429 aa18.74■□□□□ 0.59
CDC42SE2-209ENST00000506419 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
CDC42SE2-209ENST00000506419 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
CDC42SE2-209ENST00000506419 TNRC6CQ9HCJ0 1690 aaKnown RBP18.73■□□□□ 0.59
CDC42SE2-209ENST00000506419 ELL2O00472 640 aaPredicted RBP18.73■□□□□ 0.59
CDC42SE2-209ENST00000506419 ANKRD13DQ6ZTN6 518 aa18.73■□□□□ 0.59
CDC42SE2-209ENST00000506419 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
CDC42SE2-209ENST00000506419 IARSP41252 1262 aaKnown RBP18.72■□□□□ 0.59
CDC42SE2-209ENST00000506419 C8orf58Q8NAV2 365 aa18.72■□□□□ 0.59
CDC42SE2-209ENST00000506419 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
CDC42SE2-209ENST00000506419 PSMD1Q99460 953 aa18.72■□□□□ 0.59
CDC42SE2-209ENST00000506419 ZNF541Q9H0D2 1346 aa18.72■□□□□ 0.59
CDC42SE2-209ENST00000506419 ZNF316A6NFI3 1004 aaPredicted RBP18.71■□□□□ 0.59
CDC42SE2-209ENST00000506419 FZD9O00144 591 aa18.71■□□□□ 0.59
CDC42SE2-209ENST00000506419 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
CDC42SE2-209ENST00000506419 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
CDC42SE2-209ENST00000506419 GNAI1P63096 354 aa18.71■□□□□ 0.59
CDC42SE2-209ENST00000506419 CC2D2BQ6DHV5 1058 aa18.71■□□□□ 0.59
CDC42SE2-209ENST00000506419 ISCA1Q9BUE6 129 aa18.71■□□□□ 0.59
CDC42SE2-209ENST00000506419 TRMT112Q9UI30 125 aaKnown RBP18.71■□□□□ 0.59
CDC42SE2-209ENST00000506419 ATP5J2-PTCD1G3V325 749 aa18.7■□□□□ 0.58
CDC42SE2-209ENST00000506419 PHAXQ9H814 394 aaKnown RBP18.7■□□□□ 0.58
CDC42SE2-209ENST00000506419 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
CDC42SE2-209ENST00000506419 ARFGEF2Q9Y6D5 1785 aa18.69■□□□□ 0.58
CDC42SE2-209ENST00000506419 PPEF1O14829 653 aaPredicted RBP18.69■□□□□ 0.58
CDC42SE2-209ENST00000506419 L3MBTL3Q96JM7 780 aaPredicted RBP18.69■□□□□ 0.58
CDC42SE2-209ENST00000506419 CALD1Q05682 793 aaKnown RBP18.68■□□□□ 0.58
CDC42SE2-209ENST00000506419 TSPYL6Q8N831 410 aa18.68■□□□□ 0.58
CDC42SE2-209ENST00000506419 ATP6V0A2Q9Y487 856 aa18.68■□□□□ 0.58
CDC42SE2-209ENST00000506419 CACNA1SQ13698 1873 aa18.68■□□□□ 0.58
CDC42SE2-209ENST00000506419 WDR90Q96KV7 1748 aa18.68■□□□□ 0.58
CDC42SE2-209ENST00000506419 ABCC4O15439 1325 aa18.68■□□□□ 0.58
CDC42SE2-209ENST00000506419 RNF123Q5XPI4 1314 aa18.68■□□□□ 0.58
CDC42SE2-209ENST00000506419 SH3TC1Q8TE82 1336 aa18.68■□□□□ 0.58
CDC42SE2-209ENST00000506419 DICER1Q9UPY3 1922 aaKnown RBP18.67■□□□□ 0.58
CDC42SE2-209ENST00000506419 TIAM2Q8IVF5 1701 aa18.67■□□□□ 0.58
CDC42SE2-209ENST00000506419 BBOX1O75936 387 aa18.67■□□□□ 0.58
CDC42SE2-209ENST00000506419 TRIM28Q13263 835 aaKnown RBP18.67■□□□□ 0.58
CDC42SE2-209ENST00000506419 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
CDC42SE2-209ENST00000506419 TAF1DQ9H5J8 278 aaPredicted RBP18.67■□□□□ 0.58
CDC42SE2-209ENST00000506419 GRIPAP1Q4V328 841 aa18.66■□□□□ 0.58
CDC42SE2-209ENST00000506419 KLRG1Q96E93 195 aa18.66■□□□□ 0.58
CDC42SE2-209ENST00000506419 CHADLQ6NUI6 762 aa18.65■□□□□ 0.58
CDC42SE2-209ENST00000506419 WWC1Q8IX03 1113 aa18.65■□□□□ 0.58
CDC42SE2-209ENST00000506419 SP8Q8IXZ3 490 aa18.65■□□□□ 0.58
CDC42SE2-209ENST00000506419 JDP2Q8WYK2 163 aa18.65■□□□□ 0.58
CDC42SE2-209ENST00000506419 COL4A5P29400 1685 aa18.64■□□□□ 0.57
CDC42SE2-209ENST00000506419 CCDC27Q2M243 656 aa18.64■□□□□ 0.57
CDC42SE2-209ENST00000506419 RTL5Q5HYW3 569 aaPredicted RBP18.64■□□□□ 0.57
CDC42SE2-209ENST00000506419 DDX46Q7L014 1031 aaKnown RBP18.64■□□□□ 0.57
CDC42SE2-209ENST00000506419 RIC3Q7Z5B4 369 aa18.64■□□□□ 0.57
CDC42SE2-209ENST00000506419 LARGE2Q8N3Y3 721 aa18.64■□□□□ 0.57
CDC42SE2-209ENST00000506419 TSR2Q969E8 191 aaKnown RBP18.64■□□□□ 0.57
CDC42SE2-209ENST00000506419 IQCA1LA6NCM1 817 aa18.63■□□□□ 0.57
CDC42SE2-209ENST00000506419 GRAPQ13588 217 aa18.63■□□□□ 0.57
CDC42SE2-209ENST00000506419 SF3B3Q15393 1217 aaKnown RBP18.63■□□□□ 0.57
CDC42SE2-209ENST00000506419 GRAPLQ8TC17 118 aaPredicted RBP18.63■□□□□ 0.57
CDC42SE2-209ENST00000506419 RTFDC1Q9BY42 306 aaPredicted RBP18.63■□□□□ 0.57
CDC42SE2-209ENST00000506419 MRS2Q9HD23 443 aa18.63■□□□□ 0.57
CDC42SE2-209ENST00000506419 GPC2Q8N158 579 aa18.62■□□□□ 0.57
CDC42SE2-209ENST00000506419 HACL1Q9UJ83 578 aa18.62■□□□□ 0.57
CDC42SE2-209ENST00000506419 PCNTO95613 3336 aa18.62■□□□□ 0.57
CDC42SE2-209ENST00000506419 ANP32CO43423 234 aa18.61■□□□□ 0.57
CDC42SE2-209ENST00000506419 EPHX2P34913 555 aa18.61■□□□□ 0.57
CDC42SE2-209ENST00000506419 EIF6P56537 245 aaKnown RBP18.61■□□□□ 0.57
CDC42SE2-209ENST00000506419 AOC3Q16853 763 aa18.61■□□□□ 0.57
CDC42SE2-209ENST00000506419 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
CDC42SE2-209ENST00000506419 JMYQ8N9B5 988 aa18.61■□□□□ 0.57
CDC42SE2-209ENST00000506419 MYD88Q99836 296 aa18.61■□□□□ 0.57
CDC42SE2-209ENST00000506419 GJA3Q9Y6H8 435 aa18.61■□□□□ 0.57
CDC42SE2-209ENST00000506419 IRS4O14654 1257 aaPredicted RBP18.6■□□□□ 0.57
CDC42SE2-209ENST00000506419 PPIP5K2O43314 1243 aa18.6■□□□□ 0.57
CDC42SE2-209ENST00000506419 ITGBL1O95965 494 aaPredicted RBP18.6■□□□□ 0.57
CDC42SE2-209ENST00000506419 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
CDC42SE2-209ENST00000506419 LDHDQ86WU2 507 aa18.6■□□□□ 0.57
CDC42SE2-209ENST00000506419 MPNDQ8N594 471 aa18.6■□□□□ 0.57
CDC42SE2-209ENST00000506419 JARID2Q92833 1246 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms