RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 ATCAYQ86WG3 371 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 NFATC2IPQ8NCF5 419 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 TRIM35Q9UPQ4 493 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 MSH6P52701 1360 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 ITGB4P16144 1822 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 KLHL33A6NCF5 533 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 XRCC6P12956 609 aaKnown RBP eCLIP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 DDIT3P35638 169 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 IRX3P78415 501 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 CRTC2Q53ET0 693 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 PRR7Q8TB68 274 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 PLCD4Q9BRC7 762 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 BACH2Q9BYV9 841 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 GPCPD1Q9NPB8 672 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 COL4A1P02462 1669 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 ATAD2Q6PL18 1390 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 RBAK-RBAKDNI3L0D1 243 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 PTMAP06454 111 aaKnown RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 ANP32AP39687 249 aaKnown RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 CT47A1Q5JQC4 288 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 MTERF4Q7Z6M4 381 aaKnown RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 PIK3R5Q8WYR1 880 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 PPP1R9BQ96SB3 815 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 ISY1Q9ULR0 285 aaKnown RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 MRVI1Q9Y6F6 885 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 CRB1P82279 1406 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 ESPNB1AK53 854 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 MARCH6O60337 910 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 PLEKHF1Q96S99 279 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 CCDC94Q9BW85 323 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 SEPT9Q9UHD8 586 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 WWC3Q9ULE0 1092 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 BRCA1P38398 1863 aaKnown RBP2.86□□□□□ -1.95
NEDD4-205ENST00000506154 SEMA3FQ13275 785 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 GABBR1Q9UBS5 961 aa2.86□□□□□ -1.95
NEDD4-205ENST00000506154 ANKRD62A6NC57 917 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 PTGDRQ13258 359 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 NUDT18Q6ZVK8 323 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 ZNF710Q8N1W2 664 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 ZNF454Q8N9F8 522 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 YTHDC1Q96MU7 727 aaKnown RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 PRDM10Q9NQV6 1147 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 KIAA1522Q9P206 1035 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 BRWD3Q6RI45 1802 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 ZNF500O60304 480 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 ONECUT3O60422 494 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 FCHSD2O94868 740 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 SKIP12755 728 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 SATB1Q01826 763 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 EFCC1Q9HA90 598 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 CAPN10Q9HC96 672 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 TBC1D12O60347 775 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 ERCC5P28715 1186 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 ZKSCAN8Q15776 578 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 ENOX2Q16206 610 aaKnown RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 FNBP4Q8N3X1 1017 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 PDLIM2Q96JY6 352 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 UCN2Q96RP3 112 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 NOVA2Q9UNW9 492 aaKnown RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 WWC1Q8IX03 1113 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 CACTIN-AS1Q8N1I8 211 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 KLHL42Q9P2K6 505 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 RPS6KL1Q9Y6S9 549 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 TNS3Q68CZ2 1445 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 PROX2Q3B8N5 592 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 WDR75Q8IWA0 830 aaKnown RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 CCDC24Q8N4L8 307 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 LSM14AQ8ND56 463 aaKnown RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 TSPAN18Q96SJ8 248 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 CRISPLD2Q9H0B8 497 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 EIF3AQ14152 1382 aaKnown RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 SFI1A8K8P3 1242 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 RASA1P20936 1047 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 BMS1Q14692 1282 aaKnown RBP2.85□□□□□ -1.95
NEDD4-205ENST00000506154 ZNF394Q53GI3 561 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 CFAP70Q5T0N1 1121 aa2.85□□□□□ -1.95
NEDD4-205ENST00000506154 DDX60LQ5H9U9 1706 aaKnown RBP2.84□□□□□ -1.95
NEDD4-205ENST00000506154 A6NHS1 94 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 CD151P48509 253 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 MAMSTRQ6ZN01 415 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 ANP32BQ92688 251 aaKnown RBP2.84□□□□□ -1.95
NEDD4-205ENST00000506154 ITFG2Q969R8 447 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 SGSM3Q96HU1 749 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 GALR2O43603 387 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-205ENST00000506154 MICALL2Q8IY33 904 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 NME8Q8N427 588 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 ATRNO75882 1429 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 CFAP99D6REC4 459 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 LINC01559Q495D7 138 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 HS1BP3Q53T59 392 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 GIMAP6Q6P9H5 292 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 DOT1LQ8TEK3 1739 aa2.84□□□□□ -1.95
NEDD4-205ENST00000506154 HSP90AB1P08238 724 aaKnown RBP2.84□□□□□ -1.96
NEDD4-205ENST00000506154 CTHP32929 405 aa2.84□□□□□ -1.96
NEDD4-205ENST00000506154 SNRNP27Q8WVK2 155 aaKnown RBP2.84□□□□□ -1.96
NEDD4-205ENST00000506154 TSPY4P0CV99 314 aa2.84□□□□□ -1.96
NEDD4-205ENST00000506154 TSPY10P0CW01 314 aa2.84□□□□□ -1.96
NEDD4-205ENST00000506154 FOXD4L6Q3SYB3 417 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-205ENST00000506154 FOXD4L3Q6VB84 417 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-205ENST00000506154 MYBPC2Q14324 1141 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms