RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 TMX4Q9H1E5 349 aaPredicted RBP10.93□□□□□ -0.66
SNF8-204ENST00000506104 NPC1L1Q9UHC9 1359 aa10.92□□□□□ -0.66
SNF8-204ENST00000506104 CTCFP49711 727 aaPredicted RBP10.92□□□□□ -0.66
SNF8-204ENST00000506104 DEFB115Q30KQ5 88 aa10.92□□□□□ -0.66
SNF8-204ENST00000506104 PNMA8AQ86V59 439 aaPredicted RBP10.92□□□□□ -0.66
SNF8-204ENST00000506104 C7orf43Q8WVR3 580 aa10.92□□□□□ -0.66
SNF8-204ENST00000506104 L3MBTL3Q96JM7 780 aaPredicted RBP10.92□□□□□ -0.66
SNF8-204ENST00000506104 THUMPD2Q9BTF0 503 aaKnown RBP10.92□□□□□ -0.66
SNF8-204ENST00000506104 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
SNF8-204ENST00000506104 PASKQ96RG2 1323 aa10.91□□□□□ -0.66
SNF8-204ENST00000506104 EIF2S2P20042 333 aaKnown RBP10.91□□□□□ -0.66
SNF8-204ENST00000506104 TTLL7Q6ZT98 887 aa10.91□□□□□ -0.66
SNF8-204ENST00000506104 RBM17Q96I25 401 aaKnown RBP10.91□□□□□ -0.66
SNF8-204ENST00000506104 BEGAINQ9BUH8 593 aa10.91□□□□□ -0.66
SNF8-204ENST00000506104 ABCC12Q96J65 1359 aa10.9□□□□□ -0.66
SNF8-204ENST00000506104 MAPK8IP3Q9UPT6 1336 aa10.9□□□□□ -0.66
SNF8-204ENST00000506104 TRPM7Q96QT4 1865 aa10.9□□□□□ -0.66
SNF8-204ENST00000506104 PPEF1O14829 653 aaPredicted RBP10.9□□□□□ -0.66
SNF8-204ENST00000506104 ITGBL1O95965 494 aaPredicted RBP10.9□□□□□ -0.66
SNF8-204ENST00000506104 NIM1KQ8IY84 436 aa10.9□□□□□ -0.66
SNF8-204ENST00000506104 GPC2Q8N158 579 aa10.9□□□□□ -0.66
SNF8-204ENST00000506104 PNISRQ8TF01 805 aaKnown RBP10.9□□□□□ -0.66
SNF8-204ENST00000506104 NECTIN2Q92692 538 aa10.9□□□□□ -0.66
SNF8-204ENST00000506104 ZNF428Q96B54 188 aa10.9□□□□□ -0.66
SNF8-204ENST00000506104 CFAP44Q96MT7 982 aa10.9□□□□□ -0.66
SNF8-204ENST00000506104 MAP3K15Q6ZN16 1313 aa10.89□□□□□ -0.67
SNF8-204ENST00000506104 PPIP5K2O43314 1243 aa10.89□□□□□ -0.67
SNF8-204ENST00000506104 HTATSF1O43719 755 aaKnown RBP10.89□□□□□ -0.67
SNF8-204ENST00000506104 FMR1Q06787 632 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNF8-204ENST00000506104 SUSD4Q5VX71 490 aa10.89□□□□□ -0.67
SNF8-204ENST00000506104 ZNF408Q9H9D4 720 aa10.89□□□□□ -0.67
SNF8-204ENST00000506104 KDM3BQ7LBC6 1761 aa10.89□□□□□ -0.67
SNF8-204ENST00000506104 WDR33Q9C0J8 1336 aaKnown RBP10.88□□□□□ -0.67
SNF8-204ENST00000506104 FZD9O00144 591 aa10.88□□□□□ -0.67
SNF8-204ENST00000506104 EPS15P42566 896 aa10.88□□□□□ -0.67
SNF8-204ENST00000506104 AIMP1Q12904 312 aaKnown RBP10.88□□□□□ -0.67
SNF8-204ENST00000506104 SLC51AQ86UW1 340 aa10.88□□□□□ -0.67
SNF8-204ENST00000506104 PRDM10Q9NQV6 1147 aa10.88□□□□□ -0.67
SNF8-204ENST00000506104 KLRG2A4D1S0 409 aaPredicted RBP10.87□□□□□ -0.67
SNF8-204ENST00000506104 ERVV-1B6SEH8 477 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 TRAF5O00463 557 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 ANXA1P04083 346 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 EIF4A1P60842 406 aaKnown RBP10.87□□□□□ -0.67
SNF8-204ENST00000506104 AOC3Q16853 763 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 CC2D2BQ6DHV5 1058 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 CYP4F22Q6NT55 531 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 PPP1R42Q7Z4L9 355 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 NLRP3Q96P20 1036 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 PSMD1Q99460 953 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 BCL2L13Q9BXK5 485 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 DDX21Q9NR30 783 aaKnown RBP eCLIP10.87□□□□□ -0.67
SNF8-204ENST00000506104 TSPYL4Q9UJ04 414 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 TSKSQ9UJT2 592 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 TAF1P21675 1872 aa10.87□□□□□ -0.67
SNF8-204ENST00000506104 UBN2Q6ZU65 1347 aa10.86□□□□□ -0.67
SNF8-204ENST00000506104 ADAMTSL1Q8N6G6 1762 aa10.86□□□□□ -0.67
SNF8-204ENST00000506104 CCDC85CA6NKD9 419 aa10.86□□□□□ -0.67
SNF8-204ENST00000506104 HSPA8P11142 646 aaKnown RBP10.86□□□□□ -0.67
SNF8-204ENST00000506104 MAP2K1Q02750 393 aaPredicted RBP10.86□□□□□ -0.67
SNF8-204ENST00000506104 NFE2L2Q16236 605 aa10.86□□□□□ -0.67
SNF8-204ENST00000506104 CAPNS2Q96L46 248 aa10.86□□□□□ -0.67
SNF8-204ENST00000506104 WBP1LQ9NX94 342 aa10.86□□□□□ -0.67
SNF8-204ENST00000506104 LAS1LQ9Y4W2 734 aaKnown RBP10.86□□□□□ -0.67
SNF8-204ENST00000506104 COL4A5P29400 1685 aa10.85□□□□□ -0.67
SNF8-204ENST00000506104 LTBP1Q14766 1721 aa10.85□□□□□ -0.67
SNF8-204ENST00000506104 ECE1P42892 770 aa10.85□□□□□ -0.67
SNF8-204ENST00000506104 NEUROD2Q15784 382 aa10.85□□□□□ -0.67
SNF8-204ENST00000506104 C3orf67Q6ZVT6 689 aa10.85□□□□□ -0.67
SNF8-204ENST00000506104 UTP14AQ9BVJ6 771 aaKnown RBP10.85□□□□□ -0.67
SNF8-204ENST00000506104 PNNQ9H307 717 aaKnown RBP10.85□□□□□ -0.67
SNF8-204ENST00000506104 LAMB2P55268 1798 aa10.85□□□□□ -0.67
SNF8-204ENST00000506104 RASSF10A6NK89 507 aa10.84□□□□□ -0.67
SNF8-204ENST00000506104 AOC2O75106 756 aa10.84□□□□□ -0.67
SNF8-204ENST00000506104 RAD17O75943 681 aa10.84□□□□□ -0.67
SNF8-204ENST00000506104 NTSR2O95665 410 aa10.84□□□□□ -0.67
SNF8-204ENST00000506104 SCNN1DP51172 638 aa10.84□□□□□ -0.67
SNF8-204ENST00000506104 CRY2Q49AN0 593 aa10.84□□□□□ -0.67
SNF8-204ENST00000506104 DPP8Q6V1X1 898 aaPredicted RBP10.84□□□□□ -0.67
SNF8-204ENST00000506104 ABHD8Q96I13 439 aa10.84□□□□□ -0.67
SNF8-204ENST00000506104 GPR101Q96P66 508 aaPredicted RBP10.84□□□□□ -0.67
SNF8-204ENST00000506104 CRAMP1Q96RY5 1269 aa10.84□□□□□ -0.67
SNF8-204ENST00000506104 CASP8AP2Q9UKL3 1982 aa10.83□□□□□ -0.68
SNF8-204ENST00000506104 ANKRD36CQ5JPF3 1778 aa10.83□□□□□ -0.68
SNF8-204ENST00000506104 RGL2O15211 777 aa10.83□□□□□ -0.68
SNF8-204ENST00000506104 CELF2O95319 508 aaKnown RBP10.83□□□□□ -0.68
SNF8-204ENST00000506104 HCLS1P14317 486 aaPredicted RBP10.83□□□□□ -0.68
SNF8-204ENST00000506104 HOXA10P31260 410 aaPredicted RBP10.83□□□□□ -0.68
SNF8-204ENST00000506104 GMPSP49915 693 aaPredicted RBP10.83□□□□□ -0.68
SNF8-204ENST00000506104 RIPK4P57078 832 aa10.83□□□□□ -0.68
SNF8-204ENST00000506104 GRIPAP1Q4V328 841 aa10.83□□□□□ -0.68
SNF8-204ENST00000506104 GIGYF2Q6Y7W6 1299 aaKnown RBP10.83□□□□□ -0.68
SNF8-204ENST00000506104 USP50Q70EL3 339 aaPredicted RBP10.83□□□□□ -0.68
SNF8-204ENST00000506104 ZNF34Q8IZ26 560 aa10.83□□□□□ -0.68
SNF8-204ENST00000506104 MPNDQ8N594 471 aa10.83□□□□□ -0.68
SNF8-204ENST00000506104 SUPT20HQ8NEM7 779 aa10.83□□□□□ -0.68
SNF8-204ENST00000506104 ABCC4O15439 1325 aa10.83□□□□□ -0.68
SNF8-204ENST00000506104 PROSER3Q2NL68 480 aa10.82□□□□□ -0.68
SNF8-204ENST00000506104 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
SNF8-204ENST00000506104 PARP10Q53GL7 1025 aa10.82□□□□□ -0.68
SNF8-204ENST00000506104 CIAPIN1Q6FI81 312 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms