RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SCN4AP35499 1836 aa32.29■■■□□ 2.76
HERC4-212ENST00000505760 HOXA10P31260 410 aaPredicted RBP32.29■■■□□ 2.76
HERC4-212ENST00000505760 IARSP41252 1262 aaKnown RBP32.29■■■□□ 2.76
HERC4-212ENST00000505760 LAS1LQ9Y4W2 734 aaKnown RBP32.29■■■□□ 2.76
HERC4-212ENST00000505760 CC2D2BQ6DHV5 1058 aa32.28■■■□□ 2.76
HERC4-212ENST00000505760 CHADLQ6NUI6 762 aa32.28■■■□□ 2.76
HERC4-212ENST00000505760 JMYQ8N9B5 988 aa32.28■■■□□ 2.76
HERC4-212ENST00000505760 RBM17Q96I25 401 aaKnown RBP32.28■■■□□ 2.76
HERC4-212ENST00000505760 L3MBTL3Q96JM7 780 aaPredicted RBP32.27■■■□□ 2.76
HERC4-212ENST00000505760 PSMD1Q99460 953 aa32.27■■■□□ 2.76
HERC4-212ENST00000505760 CHL1O00533 1208 aa32.26■■■□□ 2.75
HERC4-212ENST00000505760 ADAMTS8Q9UP79 889 aa32.26■■■□□ 2.75
HERC4-212ENST00000505760 TRIM35Q9UPQ4 493 aa32.26■■■□□ 2.75
HERC4-212ENST00000505760 ZNF541Q9H0D2 1346 aa32.26■■■□□ 2.75
HERC4-212ENST00000505760 POTEIP0CG38 1075 aa32.25■■■□□ 2.75
HERC4-212ENST00000505760 POTEJP0CG39 1038 aa32.25■■■□□ 2.75
HERC4-212ENST00000505760 AIMP1Q12904 312 aaKnown RBP32.25■■■□□ 2.75
HERC4-212ENST00000505760 COPS6Q7L5N1 327 aa32.25■■■□□ 2.75
HERC4-212ENST00000505760 UTP14AQ9BVJ6 771 aaKnown RBP32.25■■■□□ 2.75
HERC4-212ENST00000505760 NLRP3Q96P20 1036 aa32.24■■■□□ 2.75
HERC4-212ENST00000505760 CRAMP1Q96RY5 1269 aa32.24■■■□□ 2.75
HERC4-212ENST00000505760 ANKRD36CQ5JPF3 1778 aa32.24■■■□□ 2.75
HERC4-212ENST00000505760 HSP90AB3PQ58FF7 597 aa32.23■■■□□ 2.75
HERC4-212ENST00000505760 XAGE3Q8WTP9 111 aa32.23■■■□□ 2.75
HERC4-212ENST00000505760 JDP2Q8WYK2 163 aa32.23■■■□□ 2.75
HERC4-212ENST00000505760 SNED1Q8TER0 1413 aa32.23■■■□□ 2.75
HERC4-212ENST00000505760 PPEF1O14829 653 aaPredicted RBP32.22■■■□□ 2.75
HERC4-212ENST00000505760 KRT24Q2M2I5 525 aa32.22■■■□□ 2.75
HERC4-212ENST00000505760 GRIPAP1Q4V328 841 aa32.22■■■□□ 2.75
HERC4-212ENST00000505760 C3orf67Q6ZVT6 689 aa32.22■■■□□ 2.75
HERC4-212ENST00000505760 TAF1DQ9H5J8 278 aaPredicted RBP32.22■■■□□ 2.75
HERC4-212ENST00000505760 FZD9O00144 591 aa32.21■■■□□ 2.75
HERC4-212ENST00000505760 TCERG1O14776 1098 aaKnown RBP32.21■■■□□ 2.75
HERC4-212ENST00000505760 DDX21Q9NR30 783 aaKnown RBP eCLIP32.21■■■□□ 2.75
HERC4-212ENST00000505760 LDHDQ86WU2 507 aa32.2■■■□□ 2.75
HERC4-212ENST00000505760 PRKRIP1Q9H875 184 aaPredicted RBP32.2■■■□□ 2.75
HERC4-212ENST00000505760 HACL1Q9UJ83 578 aa32.2■■■□□ 2.75
HERC4-212ENST00000505760 SLC10A5Q5PT55 438 aa32.19■■■□□ 2.74
HERC4-212ENST00000505760 TMX4Q9H1E5 349 aaPredicted RBP32.19■■■□□ 2.74
HERC4-212ENST00000505760 RNF123Q5XPI4 1314 aa32.19■■■□□ 2.74
HERC4-212ENST00000505760 EAPPQ56P03 285 aaPredicted RBP32.18■■■□□ 2.74
HERC4-212ENST00000505760 HDGFL1Q5TGJ6 251 aa32.17■■■□□ 2.74
HERC4-212ENST00000505760 GPC2Q8N158 579 aa32.17■■■□□ 2.74
HERC4-212ENST00000505760 CHPF2Q9P2E5 772 aa32.17■■■□□ 2.74
HERC4-212ENST00000505760 TCIRG1Q13488 830 aa32.16■■■□□ 2.74
HERC4-212ENST00000505760 NLRP10Q86W26 655 aa32.16■■■□□ 2.74
HERC4-212ENST00000505760 HOXB7P09629 217 aa32.15■■■□□ 2.74
HERC4-212ENST00000505760 EIF6P56537 245 aaKnown RBP32.15■■■□□ 2.74
HERC4-212ENST00000505760 LARGE2Q8N3Y3 721 aa32.15■■■□□ 2.74
HERC4-212ENST00000505760 CREBZFQ9NS37 354 aa32.15■■■□□ 2.74
HERC4-212ENST00000505760 TRMT112Q9UI30 125 aaKnown RBP32.15■■■□□ 2.74
HERC4-212ENST00000505760 EPHX2P34913 555 aa32.14■■■□□ 2.74
HERC4-212ENST00000505760 CFAP44Q96MT7 982 aa32.14■■■□□ 2.74
HERC4-212ENST00000505760 CLEC11AQ9Y240 323 aa32.14■■■□□ 2.74
HERC4-212ENST00000505760 LAMB2P55268 1798 aa32.14■■■□□ 2.74
HERC4-212ENST00000505760 SLC51AQ86UW1 340 aa32.13■■■□□ 2.73
HERC4-212ENST00000505760 COL4A5P29400 1685 aa32.12■■■□□ 2.73
HERC4-212ENST00000505760 ABCC4O15439 1325 aa32.12■■■□□ 2.73
HERC4-212ENST00000505760 HCLS1P14317 486 aaPredicted RBP32.12■■■□□ 2.73
HERC4-212ENST00000505760 PNMA8AQ86V59 439 aaPredicted RBP32.12■■■□□ 2.73
HERC4-212ENST00000505760 ATP6V0A2Q9Y487 856 aa32.12■■■□□ 2.73
HERC4-212ENST00000505760 GJA3Q9Y6H8 435 aa32.12■■■□□ 2.73
HERC4-212ENST00000505760 SH3TC1Q8TE82 1336 aa32.11■■■□□ 2.73
HERC4-212ENST00000505760 DBF4Q9UBU7 674 aaPredicted RBP32.11■■■□□ 2.73
HERC4-212ENST00000505760 DUSP27Q5VZP5 1158 aa32.09■■■□□ 2.73
HERC4-212ENST00000505760 ANKRD13DQ6ZTN6 518 aa32.09■■■□□ 2.73
HERC4-212ENST00000505760 NIM1KQ8IY84 436 aa32.09■■■□□ 2.73
HERC4-212ENST00000505760 PLBD2Q8NHP8 589 aa32.09■■■□□ 2.73
HERC4-212ENST00000505760 MBIPQ9NS73 344 aa32.09■■■□□ 2.73
HERC4-212ENST00000505760 PASKQ96RG2 1323 aa32.08■■■□□ 2.73
HERC4-212ENST00000505760 PPIP5K2O43314 1243 aa32.08■■■□□ 2.73
HERC4-212ENST00000505760 BBOX1O75936 387 aa32.08■■■□□ 2.73
HERC4-212ENST00000505760 DDX46Q7L014 1031 aaKnown RBP32.08■■■□□ 2.73
HERC4-212ENST00000505760 ADAMTSL1Q8N6G6 1762 aa32.07■■■□□ 2.72
HERC4-212ENST00000505760 LMOD1P29536 600 aaPredicted RBP32.07■■■□□ 2.72
HERC4-212ENST00000505760 HYPKQ9NX55 129 aa32.07■■■□□ 2.72
HERC4-212ENST00000505760 MKRN1Q9UHC7 482 aaKnown RBP32.07■■■□□ 2.72
HERC4-212ENST00000505760 APAF1O14727 1248 aa32.06■■■□□ 2.72
HERC4-212ENST00000505760 ZNF428Q96B54 188 aa32.06■■■□□ 2.72
HERC4-212ENST00000505760 ITGBL1O95965 494 aaPredicted RBP32.05■■■□□ 2.72
HERC4-212ENST00000505760 CALD1Q05682 793 aaKnown RBP32.05■■■□□ 2.72
HERC4-212ENST00000505760 SUPT20HQ8NEM7 779 aa32.05■■■□□ 2.72
HERC4-212ENST00000505760 VPS33BQ9H267 617 aa32.05■■■□□ 2.72
HERC4-212ENST00000505760 AOC3Q16853 763 aa32.04■■■□□ 2.72
HERC4-212ENST00000505760 DPP8Q6V1X1 898 aaPredicted RBP32.04■■■□□ 2.72
HERC4-212ENST00000505760 SP8Q8IXZ3 490 aa32.04■■■□□ 2.72
HERC4-212ENST00000505760 HSPA1AP0DMV8 641 aaKnown RBP32.03■■■□□ 2.72
HERC4-212ENST00000505760 HSPA1BP0DMV9 641 aaKnown RBP32.03■■■□□ 2.72
HERC4-212ENST00000505760 MAP1SQ66K74 1059 aaPredicted RBP32.03■■■□□ 2.72
HERC4-212ENST00000505760 TAF1P21675 1872 aa32.03■■■□□ 2.72
HERC4-212ENST00000505760 ZNF853P0CG23 659 aa32.02■■■□□ 2.72
HERC4-212ENST00000505760 GNAI1P63096 354 aa32.02■■■□□ 2.72
HERC4-212ENST00000505760 GRAPQ13588 217 aa32.02■■■□□ 2.72
HERC4-212ENST00000505760 COL13A1Q5TAT6 717 aaPredicted RBP32.02■■■□□ 2.72
HERC4-212ENST00000505760 CNTROBQ8N137 903 aa32.02■■■□□ 2.72
HERC4-212ENST00000505760 GRAPLQ8TC17 118 aaPredicted RBP32.02■■■□□ 2.72
HERC4-212ENST00000505760 IFT57Q9NWB7 429 aa32.02■■■□□ 2.72
HERC4-212ENST00000505760 TMEM88BA6NKF7 163 aa32.01■■■□□ 2.71
HERC4-212ENST00000505760 ATP5J2-PTCD1G3V325 749 aa32.01■■■□□ 2.71
HERC4-212ENST00000505760 MPNDQ8N594 471 aa32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms