RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ABHD8Q96I13 439 aa9.91□□□□□ -0.82
VCAN-206ENST00000505615 PUS7Q96PZ0 661 aaKnown RBP9.91□□□□□ -0.82
VCAN-206ENST00000505615 TMOD3Q9NYL9 352 aa9.91□□□□□ -0.82
VCAN-206ENST00000505615 RPS6KA4O75676 772 aa9.9□□□□□ -0.82
VCAN-206ENST00000505615 LMNB1P20700 586 aa9.9□□□□□ -0.82
VCAN-206ENST00000505615 COL9A1P20849 921 aa9.9□□□□□ -0.82
VCAN-206ENST00000505615 PROX2Q3B8N5 592 aa9.9□□□□□ -0.82
VCAN-206ENST00000505615 KIF24Q5T7B8 1368 aa9.89□□□□□ -0.83
VCAN-206ENST00000505615 NFKBIEO00221 500 aa9.89□□□□□ -0.83
VCAN-206ENST00000505615 RFC4P35249 363 aa9.89□□□□□ -0.83
VCAN-206ENST00000505615 SRP68Q9UHB9 627 aaKnown RBP9.89□□□□□ -0.83
VCAN-206ENST00000505615 TONSLQ96HA7 1378 aa9.88□□□□□ -0.83
VCAN-206ENST00000505615 USP42Q9H9J4 1324 aaKnown RBP9.88□□□□□ -0.83
VCAN-206ENST00000505615 ANKRD31Q8N7Z5 1873 aa9.88□□□□□ -0.83
VCAN-206ENST00000505615 POLRMTO00411 1230 aaKnown RBP9.88□□□□□ -0.83
VCAN-206ENST00000505615 FYB1O15117 783 aa9.88□□□□□ -0.83
VCAN-206ENST00000505615 HSPA8P11142 646 aaKnown RBP9.88□□□□□ -0.83
VCAN-206ENST00000505615 PHKG2P15735 406 aa9.88□□□□□ -0.83
VCAN-206ENST00000505615 RGS19P49795 217 aa9.88□□□□□ -0.83
VCAN-206ENST00000505615 LBX1P52954 281 aa9.88□□□□□ -0.83
VCAN-206ENST00000505615 FBXW7Q969H0 707 aa9.88□□□□□ -0.83
VCAN-206ENST00000505615 IRX2Q9BZI1 471 aaPredicted RBP9.88□□□□□ -0.83
VCAN-206ENST00000505615 WBP1LQ9NX94 342 aa9.88□□□□□ -0.83
VCAN-206ENST00000505615 DAXXQ9UER7 740 aaPredicted RBP9.88□□□□□ -0.83
VCAN-206ENST00000505615 THSD7BQ9C0I4 1608 aa9.88□□□□□ -0.83
VCAN-206ENST00000505615 PASKQ96RG2 1323 aa9.87□□□□□ -0.83
VCAN-206ENST00000505615 VEGFBP49765 207 aa9.87□□□□□ -0.83
VCAN-206ENST00000505615 TYW1BQ6NUM6 668 aa9.87□□□□□ -0.83
VCAN-206ENST00000505615 ANKK1Q8NFD2 765 aa9.87□□□□□ -0.83
VCAN-206ENST00000505615 GGNBP2Q9H3C7 697 aa9.87□□□□□ -0.83
VCAN-206ENST00000505615 SPG7Q9UQ90 795 aa9.87□□□□□ -0.83
VCAN-206ENST00000505615 COL11A2P13942 1736 aaPredicted RBP9.87□□□□□ -0.83
VCAN-206ENST00000505615 SCN4AP35499 1836 aa9.86□□□□□ -0.83
VCAN-206ENST00000505615 ADAMTSL1Q8N6G6 1762 aa9.86□□□□□ -0.83
VCAN-206ENST00000505615 TM4SF1P30408 202 aa9.86□□□□□ -0.83
VCAN-206ENST00000505615 MLLT1Q03111 559 aaPredicted RBP9.86□□□□□ -0.83
VCAN-206ENST00000505615 LAPTM4BQ86VI4 370 aa9.86□□□□□ -0.83
VCAN-206ENST00000505615 AIDAQ96BJ3 306 aa9.86□□□□□ -0.83
VCAN-206ENST00000505615 CACNA1SQ13698 1873 aa9.85□□□□□ -0.83
VCAN-206ENST00000505615 PRKCSHP14314 528 aaPredicted RBP9.85□□□□□ -0.83
VCAN-206ENST00000505615 CRKLP46109 303 aaKnown RBP9.85□□□□□ -0.83
VCAN-206ENST00000505615 IFNL2Q8IZJ0 200 aa9.85□□□□□ -0.83
VCAN-206ENST00000505615 TESK2Q96S53 571 aa9.85□□□□□ -0.83
VCAN-206ENST00000505615 CARD11Q9BXL7 1154 aa9.85□□□□□ -0.83
VCAN-206ENST00000505615 EMILIN1Q9Y6C2 1016 aa9.85□□□□□ -0.83
VCAN-206ENST00000505615 SOWAHBA6NEL2 793 aa9.84□□□□□ -0.83
VCAN-206ENST00000505615 BCAMP50895 628 aa9.84□□□□□ -0.83
VCAN-206ENST00000505615 CAMK2BQ13554 666 aa9.84□□□□□ -0.83
VCAN-206ENST00000505615 SIN3AQ96ST3 1273 aa9.84□□□□□ -0.83
VCAN-206ENST00000505615 EYA1Q99502 592 aa9.84□□□□□ -0.83
VCAN-206ENST00000505615 CARMIL3Q8ND23 1372 aa9.84□□□□□ -0.83
VCAN-206ENST00000505615 ARFGEF2Q9Y6D5 1785 aa9.83□□□□□ -0.84
VCAN-206ENST00000505615 CASP8AP2Q9UKL3 1982 aa9.83□□□□□ -0.84
VCAN-206ENST00000505615 TTLL6Q8N841 843 aa9.83□□□□□ -0.84
VCAN-206ENST00000505615 SLX4Q8IY92 1834 aa9.82□□□□□ -0.84
VCAN-206ENST00000505615 ERVV-2B6SEH9 535 aa9.82□□□□□ -0.84
VCAN-206ENST00000505615 NYAP1Q6ZVC0 841 aa9.82□□□□□ -0.84
VCAN-206ENST00000505615 LTBP1Q14766 1721 aa9.82□□□□□ -0.84
VCAN-206ENST00000505615 SCN11AQ9UI33 1791 aa9.81□□□□□ -0.84
VCAN-206ENST00000505615 CCDC85CA6NKD9 419 aa9.81□□□□□ -0.84
VCAN-206ENST00000505615 TMEM88BA6NKF7 163 aa9.81□□□□□ -0.84
VCAN-206ENST00000505615 DDNO94850 711 aaPredicted RBP9.81□□□□□ -0.84
VCAN-206ENST00000505615 NFIXQ14938 502 aa9.81□□□□□ -0.84
VCAN-206ENST00000505615 INTS5Q6P9B9 1019 aaKnown RBP9.81□□□□□ -0.84
VCAN-206ENST00000505615 ZFRQ96KR1 1074 aaKnown RBP9.81□□□□□ -0.84
VCAN-206ENST00000505615 RASSF10A6NK89 507 aa9.8□□□□□ -0.84
VCAN-206ENST00000505615 ERFEQ4G0M1 354 aa9.8□□□□□ -0.84
VCAN-206ENST00000505615 USPL1Q5W0Q7 1092 aa9.8□□□□□ -0.84
VCAN-206ENST00000505615 LDHDQ86WU2 507 aa9.8□□□□□ -0.84
VCAN-206ENST00000505615 KIAA1468Q9P260 1216 aa9.8□□□□□ -0.84
VCAN-206ENST00000505615 TRPM7Q96QT4 1865 aa9.8□□□□□ -0.84
VCAN-206ENST00000505615 SOS1Q07889 1333 aaPredicted RBP9.8□□□□□ -0.84
VCAN-206ENST00000505615 WASHC2AQ641Q2 1341 aa9.8□□□□□ -0.84
VCAN-206ENST00000505615 LTBP3Q9NS15 1303 aa9.8□□□□□ -0.84
VCAN-206ENST00000505615 PTCD1O75127 700 aaKnown RBP9.79□□□□□ -0.84
VCAN-206ENST00000505615 PLCB2Q00722 1185 aa9.79□□□□□ -0.84
VCAN-206ENST00000505615 C6orf132Q5T0Z8 1188 aa9.79□□□□□ -0.84
VCAN-206ENST00000505615 C2CD5Q86YS7 1000 aa9.79□□□□□ -0.84
VCAN-206ENST00000505615 EPAS1Q99814 870 aa9.79□□□□□ -0.84
VCAN-206ENST00000505615 TAF1DQ9H5J8 278 aaPredicted RBP9.79□□□□□ -0.84
VCAN-206ENST00000505615 WDR33Q9C0J8 1336 aaKnown RBP9.78□□□□□ -0.84
VCAN-206ENST00000505615 SCN7AQ01118 1682 aa9.77□□□□□ -0.84
VCAN-206ENST00000505615 ST20-MTHFSA0A0A6YYL1 179 aa9.77□□□□□ -0.85
VCAN-206ENST00000505615 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
VCAN-206ENST00000505615 C21orf2O43822 256 aa9.77□□□□□ -0.85
VCAN-206ENST00000505615 SERPINB2P05120 415 aa9.77□□□□□ -0.85
VCAN-206ENST00000505615 MAP2K1Q02750 393 aaPredicted RBP9.77□□□□□ -0.85
VCAN-206ENST00000505615 NEUROD1Q13562 356 aa9.77□□□□□ -0.85
VCAN-206ENST00000505615 COL15A1P39059 1388 aa9.76□□□□□ -0.85
VCAN-206ENST00000505615 IQCA1LA6NCM1 817 aa9.76□□□□□ -0.85
VCAN-206ENST00000505615 H0YIN7 160 aa9.76□□□□□ -0.85
VCAN-206ENST00000505615 ZPR1O75312 459 aa9.76□□□□□ -0.85
VCAN-206ENST00000505615 HSP90AB1P08238 724 aaKnown RBP9.76□□□□□ -0.85
VCAN-206ENST00000505615 CABP4P57796 275 aa9.76□□□□□ -0.85
VCAN-206ENST00000505615 DEFB115Q30KQ5 88 aa9.76□□□□□ -0.85
VCAN-206ENST00000505615 SEPT9Q9UHD8 586 aaPredicted RBP9.76□□□□□ -0.85
VCAN-206ENST00000505615 NARFQ9UHQ1 456 aa9.76□□□□□ -0.85
VCAN-206ENST00000505615 DPYSL4O14531 572 aa9.75□□□□□ -0.85
VCAN-206ENST00000505615 PPM1GO15355 546 aaPredicted RBP9.75□□□□□ -0.85
VCAN-206ENST00000505615 EIF4A2Q14240 407 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms