RNA–Protein interactions for RNA: ENST00000505591.1

COL25A1-206, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 3

Gene COL25A1, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-206ENST00000505591 ABCC12Q96J65 1359 aa16.55■□□□□ 0.24
COL25A1-206ENST00000505591 LMOD1P29536 600 aaPredicted RBP16.55■□□□□ 0.24
COL25A1-206ENST00000505591 HOXA10P31260 410 aaPredicted RBP16.55■□□□□ 0.24
COL25A1-206ENST00000505591 DEFB115Q30KQ5 88 aa16.55■□□□□ 0.24
COL25A1-206ENST00000505591 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
COL25A1-206ENST00000505591 NGEFQ8N5V2 710 aa16.55■□□□□ 0.24
COL25A1-206ENST00000505591 WBP1LQ9NX94 342 aa16.55■□□□□ 0.24
COL25A1-206ENST00000505591 MAP1SQ66K74 1059 aaPredicted RBP16.54■□□□□ 0.24
COL25A1-206ENST00000505591 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
COL25A1-206ENST00000505591 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
COL25A1-206ENST00000505591 EIF4A1P60842 406 aaKnown RBP16.53■□□□□ 0.24
COL25A1-206ENST00000505591 MAP2K1Q02750 393 aaPredicted RBP16.53■□□□□ 0.24
COL25A1-206ENST00000505591 LARGE2Q8N3Y3 721 aa16.53■□□□□ 0.24
COL25A1-206ENST00000505591 CRAMP1Q96RY5 1269 aa16.53■□□□□ 0.24
COL25A1-206ENST00000505591 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
COL25A1-206ENST00000505591 GJA3Q9Y6H8 435 aa16.53■□□□□ 0.24
COL25A1-206ENST00000505591 ERBB4Q15303 1308 aa16.52■□□□□ 0.24
COL25A1-206ENST00000505591 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.24
COL25A1-206ENST00000505591 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
COL25A1-206ENST00000505591 ABT1Q9ULW3 272 aaKnown RBP16.52■□□□□ 0.24
COL25A1-206ENST00000505591 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
COL25A1-206ENST00000505591 PPEF1O14829 653 aaPredicted RBP16.51■□□□□ 0.23
COL25A1-206ENST00000505591 MYL6BP14649 208 aa16.51■□□□□ 0.23
COL25A1-206ENST00000505591 GPTP24298 496 aa16.51■□□□□ 0.23
COL25A1-206ENST00000505591 USP50Q70EL3 339 aaPredicted RBP16.51■□□□□ 0.23
COL25A1-206ENST00000505591 PPP1R42Q7Z4L9 355 aa16.51■□□□□ 0.23
COL25A1-206ENST00000505591 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
COL25A1-206ENST00000505591 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
COL25A1-206ENST00000505591 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL25A1-206ENST00000505591 NUP98P52948 1817 aa16.51■□□□□ 0.23
COL25A1-206ENST00000505591 UBN2Q6ZU65 1347 aa16.5■□□□□ 0.23
COL25A1-206ENST00000505591 WDR33Q9C0J8 1336 aaKnown RBP16.5■□□□□ 0.23
COL25A1-206ENST00000505591 LBX1P52954 281 aa16.5■□□□□ 0.23
COL25A1-206ENST00000505591 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
COL25A1-206ENST00000505591 PARP10Q53GL7 1025 aa16.5■□□□□ 0.23
COL25A1-206ENST00000505591 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
COL25A1-206ENST00000505591 GIGYF2Q6Y7W6 1299 aaKnown RBP16.5■□□□□ 0.23
COL25A1-206ENST00000505591 ZNF34Q8IZ26 560 aa16.5■□□□□ 0.23
COL25A1-206ENST00000505591 NTSR2O95665 410 aa16.49■□□□□ 0.23
COL25A1-206ENST00000505591 SCNN1DP51172 638 aa16.49■□□□□ 0.23
COL25A1-206ENST00000505591 NIM1KQ8IY84 436 aa16.49■□□□□ 0.23
COL25A1-206ENST00000505591 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
COL25A1-206ENST00000505591 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
COL25A1-206ENST00000505591 ECE1P42892 770 aa16.48■□□□□ 0.23
COL25A1-206ENST00000505591 PLEKHF1Q96S99 279 aa16.48■□□□□ 0.23
COL25A1-206ENST00000505591 COL4A5P29400 1685 aa16.47■□□□□ 0.23
COL25A1-206ENST00000505591 PPIP5K2O43314 1243 aa16.47■□□□□ 0.23
COL25A1-206ENST00000505591 HSPA8P11142 646 aaKnown RBP16.47■□□□□ 0.23
COL25A1-206ENST00000505591 EPS15P42566 896 aa16.47■□□□□ 0.23
COL25A1-206ENST00000505591 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
COL25A1-206ENST00000505591 BEGAINQ9BUH8 593 aa16.47■□□□□ 0.23
COL25A1-206ENST00000505591 DLG5Q8TDM6 1919 aa16.47■□□□□ 0.23
COL25A1-206ENST00000505591 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
COL25A1-206ENST00000505591 UTP14AQ9BVJ6 771 aaKnown RBP16.46■□□□□ 0.23
COL25A1-206ENST00000505591 ADARB2Q9NS39 739 aaKnown RBP16.46■□□□□ 0.23
COL25A1-206ENST00000505591 ATP6V0A2Q9Y487 856 aa16.46■□□□□ 0.23
COL25A1-206ENST00000505591 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
COL25A1-206ENST00000505591 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
COL25A1-206ENST00000505591 CAPNS2Q96L46 248 aa16.45■□□□□ 0.22
COL25A1-206ENST00000505591 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
COL25A1-206ENST00000505591 BABAM1Q9NWV8 329 aa16.45■□□□□ 0.22
COL25A1-206ENST00000505591 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
COL25A1-206ENST00000505591 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
COL25A1-206ENST00000505591 BBOX1O75936 387 aa16.44■□□□□ 0.22
COL25A1-206ENST00000505591 HSP90AB3PQ58FF7 597 aa16.44■□□□□ 0.22
COL25A1-206ENST00000505591 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
COL25A1-206ENST00000505591 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
COL25A1-206ENST00000505591 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
COL25A1-206ENST00000505591 GPRC5DQ9NZD1 345 aa16.44■□□□□ 0.22
COL25A1-206ENST00000505591 ZNRF3Q9ULT6 936 aa16.44■□□□□ 0.22
COL25A1-206ENST00000505591 AOC3Q16853 763 aa16.43■□□□□ 0.22
COL25A1-206ENST00000505591 TLL2Q9Y6L7 1015 aa16.43■□□□□ 0.22
COL25A1-206ENST00000505591 ABCC4O15439 1325 aa16.43■□□□□ 0.22
COL25A1-206ENST00000505591 CDHR2Q9BYE9 1310 aa16.43■□□□□ 0.22
COL25A1-206ENST00000505591 THSD7BQ9C0I4 1608 aa16.42■□□□□ 0.22
COL25A1-206ENST00000505591 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
COL25A1-206ENST00000505591 MAP2K2P36507 400 aa16.42■□□□□ 0.22
COL25A1-206ENST00000505591 CST9Q5W186 159 aa16.42■□□□□ 0.22
COL25A1-206ENST00000505591 DPP8Q6V1X1 898 aaPredicted RBP16.42■□□□□ 0.22
COL25A1-206ENST00000505591 LRP10Q7Z4F1 713 aa16.42■□□□□ 0.22
COL25A1-206ENST00000505591 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
COL25A1-206ENST00000505591 ABHD8Q96I13 439 aa16.42■□□□□ 0.22
COL25A1-206ENST00000505591 CXCL9Q07325 125 aa16.41■□□□□ 0.22
COL25A1-206ENST00000505591 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
COL25A1-206ENST00000505591 PDIA6Q15084 440 aa16.41■□□□□ 0.22
COL25A1-206ENST00000505591 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
COL25A1-206ENST00000505591 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
COL25A1-206ENST00000505591 TRPM7Q96QT4 1865 aa16.4■□□□□ 0.22
COL25A1-206ENST00000505591 TRAF5O00463 557 aa16.4■□□□□ 0.22
COL25A1-206ENST00000505591 FMR1Q06787 632 aaKnown RBP eCLIP16.4■□□□□ 0.22
COL25A1-206ENST00000505591 KIAA2012Q0VF49 1180 aa16.4■□□□□ 0.22
COL25A1-206ENST00000505591 GRM1Q13255 1194 aa16.4■□□□□ 0.22
COL25A1-206ENST00000505591 TNIP1Q15025 636 aa16.4■□□□□ 0.22
COL25A1-206ENST00000505591 CIAPIN1Q6FI81 312 aa16.4■□□□□ 0.22
COL25A1-206ENST00000505591 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
COL25A1-206ENST00000505591 TMC4Q7Z404 712 aa16.4■□□□□ 0.22
COL25A1-206ENST00000505591 MPNDQ8N594 471 aa16.4■□□□□ 0.22
COL25A1-206ENST00000505591 HHIPL1Q96JK4 782 aa16.4■□□□□ 0.22
COL25A1-206ENST00000505591 CA12O43570 354 aa16.39■□□□□ 0.21
COL25A1-206ENST00000505591 GMPSP49915 693 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms