RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 RGL4Q8IZJ4 473 aa7.49□□□□□ -1.21
SNX25-203ENST00000504959 PANK3Q9H999 370 aa7.49□□□□□ -1.21
SNX25-203ENST00000504959 UGGT1Q9NYU2 1555 aa7.49□□□□□ -1.21
SNX25-203ENST00000504959 WASHC2CQ9Y4E1 1318 aa7.49□□□□□ -1.21
SNX25-203ENST00000504959 ABCA6Q8N139 1617 aa7.49□□□□□ -1.21
SNX25-203ENST00000504959 COPS2P61201 443 aa7.48□□□□□ -1.21
SNX25-203ENST00000504959 SF3B2Q13435 895 aaKnown RBP7.48□□□□□ -1.21
SNX25-203ENST00000504959 C4orf48Q5BLP8 95 aa7.48□□□□□ -1.21
SNX25-203ENST00000504959 CC2D1BQ5T0F9 858 aaKnown RBP7.48□□□□□ -1.21
SNX25-203ENST00000504959 ERICH6BQ5W0A0 696 aa7.48□□□□□ -1.21
SNX25-203ENST00000504959 CCDC24Q8N4L8 307 aa7.48□□□□□ -1.21
SNX25-203ENST00000504959 BACH2Q9BYV9 841 aa7.48□□□□□ -1.21
SNX25-203ENST00000504959 PCDHB11Q9Y5F2 797 aa7.48□□□□□ -1.21
SNX25-203ENST00000504959 KDM5AP29375 1690 aaKnown RBP7.48□□□□□ -1.21
SNX25-203ENST00000504959 TLL1O43897 1013 aa7.47□□□□□ -1.21
SNX25-203ENST00000504959 HMGB1P09429 215 aaKnown RBP7.47□□□□□ -1.21
SNX25-203ENST00000504959 EAPPQ56P03 285 aaPredicted RBP7.47□□□□□ -1.21
SNX25-203ENST00000504959 NAALADL2Q58DX5 795 aa7.47□□□□□ -1.21
SNX25-203ENST00000504959 TJAP1Q5JTD0 557 aa7.47□□□□□ -1.21
SNX25-203ENST00000504959 FOXJ1Q92949 421 aa7.47□□□□□ -1.21
SNX25-203ENST00000504959 PARD3Q8TEW0 1356 aa7.47□□□□□ -1.21
SNX25-203ENST00000504959 MYOM2P54296 1465 aa7.47□□□□□ -1.21
SNX25-203ENST00000504959 P4HBP07237 508 aaKnown RBP7.47□□□□□ -1.21
SNX25-203ENST00000504959 KNSTRNQ9Y448 316 aa7.47□□□□□ -1.21
SNX25-203ENST00000504959 SMG6Q86US8 1419 aaKnown RBP7.47□□□□□ -1.21
SNX25-203ENST00000504959 FRMPD1Q5SYB0 1578 aa7.46□□□□□ -1.21
SNX25-203ENST00000504959 CAMSAP1Q5T5Y3 1602 aa7.46□□□□□ -1.21
SNX25-203ENST00000504959 RICTORQ6R327 1708 aa7.46□□□□□ -1.21
SNX25-203ENST00000504959 PPLO60437 1756 aa7.46□□□□□ -1.21
SNX25-203ENST00000504959 RAPGEF3O95398 923 aa7.46□□□□□ -1.22
SNX25-203ENST00000504959 USP4Q13107 963 aa7.46□□□□□ -1.22
SNX25-203ENST00000504959 CCDC125Q86Z20 511 aa7.46□□□□□ -1.22
SNX25-203ENST00000504959 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
SNX25-203ENST00000504959 NUDCQ9Y266 331 aa7.46□□□□□ -1.22
SNX25-203ENST00000504959 SYNMO15061 1565 aa7.46□□□□□ -1.22
SNX25-203ENST00000504959 LRPPRCP42704 1394 aaKnown RBP7.45□□□□□ -1.22
SNX25-203ENST00000504959 MRPL58Q14197 206 aaKnown RBP7.45□□□□□ -1.22
SNX25-203ENST00000504959 COL19A1Q14993 1142 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 LINC01559Q495D7 138 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 C9orf131Q5VYM1 1079 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 TMC7Q7Z402 723 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 BAP1Q92560 729 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 PPP4R2Q9NY27 417 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 PPP1R1BQ9UD71 204 aaPredicted RBP7.45□□□□□ -1.22
SNX25-203ENST00000504959 TSPOAP1O95153 1857 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 ZC3H13Q5T200 1668 aaKnown RBP7.45□□□□□ -1.22
SNX25-203ENST00000504959 ADGRB3O60242 1522 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 ADGRF5Q8IZF2 1346 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 SENP3-EIF4A1A0A087X0R7 540 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 PTCD1O75127 700 aaKnown RBP7.45□□□□□ -1.22
SNX25-203ENST00000504959 AGERQ15109 404 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 LDLRAD1Q5T700 205 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 RNF20Q5VTR2 975 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 HELQQ8TDG4 1101 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 SLC10A4Q96EP9 437 aa7.45□□□□□ -1.22
SNX25-203ENST00000504959 MYOM1P52179 1685 aa7.44□□□□□ -1.22
SNX25-203ENST00000504959 DIP2CQ9Y2E4 1556 aa7.44□□□□□ -1.22
SNX25-203ENST00000504959 ABCC3O15438 1527 aa7.44□□□□□ -1.22
SNX25-203ENST00000504959 NPATQ14207 1427 aa7.44□□□□□ -1.22
SNX25-203ENST00000504959 ESPNB1AK53 854 aa7.44□□□□□ -1.22
SNX25-203ENST00000504959 NBPF20Q3BBV1 942 aa7.44□□□□□ -1.22
SNX25-203ENST00000504959 BPHLQ86WA6 291 aaPredicted RBP7.44□□□□□ -1.22
SNX25-203ENST00000504959 MTRQ99707 1265 aa7.44□□□□□ -1.22
SNX25-203ENST00000504959 NOS1P29475 1434 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 CDK11BP21127 795 aaKnown RBP7.43□□□□□ -1.22
SNX25-203ENST00000504959 ERCC5P28715 1186 aaPredicted RBP7.43□□□□□ -1.22
SNX25-203ENST00000504959 SCTRP47872 440 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 HDLBPQ00341 1268 aaKnown RBP7.43□□□□□ -1.22
SNX25-203ENST00000504959 IL21Q9HBE4 155 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 ZNF358Q9NW07 568 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 SETBP1Q9Y6X0 1596 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 M0R2N6 131 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 STAU1O95793 577 aaKnown RBP7.43□□□□□ -1.22
SNX25-203ENST00000504959 MPSTP25325 297 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 RAB15P59190 212 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 ZNF511Q8NB15 262 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 FAM161BQ96MY7 647 aa7.43□□□□□ -1.22
SNX25-203ENST00000504959 SIGLEC1Q9BZZ2 1709 aa7.42□□□□□ -1.22
SNX25-203ENST00000504959 MYO3AQ8NEV4 1616 aa7.42□□□□□ -1.22
SNX25-203ENST00000504959 RPGRIP1LQ68CZ1 1315 aa7.42□□□□□ -1.22
SNX25-203ENST00000504959 ASXL1Q8IXJ9 1541 aa7.42□□□□□ -1.22
SNX25-203ENST00000504959 SMARCA5O60264 1052 aaPredicted RBP7.42□□□□□ -1.22
SNX25-203ENST00000504959 NPR3P17342 541 aa7.42□□□□□ -1.22
SNX25-203ENST00000504959 RBCK1Q9BYM8 510 aa7.42□□□□□ -1.22
SNX25-203ENST00000504959 NRXN1Q9ULB1 1477 aa7.42□□□□□ -1.22
SNX25-203ENST00000504959 QRICH2Q9H0J4 1663 aa7.42□□□□□ -1.22
SNX25-203ENST00000504959 TMEM229AB2RXF0 380 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 UBXN4Q92575 508 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 COL26A1Q96A83 441 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 RNF19AQ9NV58 838 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 CENPJQ9HC77 1338 aaPredicted RBP7.41□□□□□ -1.22
SNX25-203ENST00000504959 MYO5BQ9ULV0 1848 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 PIK3C2BO00750 1634 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 ADH1BP00325 375 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 PDE3BQ13370 1112 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 WDR43Q15061 677 aaKnown RBP eCLIP7.41□□□□□ -1.22
SNX25-203ENST00000504959 C1QTNF2Q9BXJ5 285 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 SAP130Q9H0E3 1048 aa7.41□□□□□ -1.22
SNX25-203ENST00000504959 FANCIQ9NVI1 1328 aa7.4□□□□□ -1.22
SNX25-203ENST00000504959 ERVK-7P63135 1459 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms