RNA–Protein interactions for RNA: ENST00000504805.6

RUFY3-207, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 5

Gene RUFY3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-207ENST00000504805 NBPF26B4DH59 902 aa9.35□□□□□ -0.91
RUFY3-207ENST00000504805 PYGBP11216 843 aa9.35□□□□□ -0.91
RUFY3-207ENST00000504805 MYL6BP14649 208 aa9.35□□□□□ -0.91
RUFY3-207ENST00000504805 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
RUFY3-207ENST00000504805 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
RUFY3-207ENST00000504805 USPL1Q5W0Q7 1092 aa9.35□□□□□ -0.91
RUFY3-207ENST00000504805 NBPF10Q6P3W6 841 aaKnown RBP9.35□□□□□ -0.91
RUFY3-207ENST00000504805 DZIP3Q86Y13 1208 aaKnown RBP9.35□□□□□ -0.91
RUFY3-207ENST00000504805 NBPF15Q8N660 670 aa9.35□□□□□ -0.91
RUFY3-207ENST00000504805 KLRG1Q96E93 195 aa9.35□□□□□ -0.91
RUFY3-207ENST00000504805 SLC24A3Q9HC58 644 aa9.35□□□□□ -0.91
RUFY3-207ENST00000504805 SRP68Q9UHB9 627 aaKnown RBP9.35□□□□□ -0.91
RUFY3-207ENST00000504805 ELL2O00472 640 aaPredicted RBP9.34□□□□□ -0.91
RUFY3-207ENST00000504805 C9orf131Q5VYM1 1079 aa9.34□□□□□ -0.91
RUFY3-207ENST00000504805 KIF6Q6ZMV9 814 aa9.34□□□□□ -0.91
RUFY3-207ENST00000504805 NECTIN2Q92692 538 aa9.34□□□□□ -0.91
RUFY3-207ENST00000504805 TBC1D2BQ9UPU7 963 aa9.34□□□□□ -0.91
RUFY3-207ENST00000504805 ZNF652Q9Y2D9 606 aa9.34□□□□□ -0.91
RUFY3-207ENST00000504805 COL11A2P13942 1736 aaPredicted RBP9.34□□□□□ -0.92
RUFY3-207ENST00000504805 DICER1Q9UPY3 1922 aaKnown RBP9.33□□□□□ -0.92
RUFY3-207ENST00000504805 E9PSI1 815 aa9.33□□□□□ -0.92
RUFY3-207ENST00000504805 HNRNPUQ00839 825 aaKnown RBP eCLIP9.33□□□□□ -0.92
RUFY3-207ENST00000504805 DDR1Q08345 913 aa9.33□□□□□ -0.92
RUFY3-207ENST00000504805 TWISTNBQ3B726 338 aaPredicted RBP9.33□□□□□ -0.92
RUFY3-207ENST00000504805 ARHGAP27Q6ZUM4 889 aa9.33□□□□□ -0.92
RUFY3-207ENST00000504805 C8orf58Q8NAV2 365 aa9.33□□□□□ -0.92
RUFY3-207ENST00000504805 CHPF2Q9P2E5 772 aa9.33□□□□□ -0.92
RUFY3-207ENST00000504805 DBF4Q9UBU7 674 aaPredicted RBP9.33□□□□□ -0.92
RUFY3-207ENST00000504805 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
RUFY3-207ENST00000504805 ANKRD31Q8N7Z5 1873 aa9.32□□□□□ -0.92
RUFY3-207ENST00000504805 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
RUFY3-207ENST00000504805 CAMTA2O94983 1202 aa9.32□□□□□ -0.92
RUFY3-207ENST00000504805 FSTL1Q12841 308 aa9.32□□□□□ -0.92
RUFY3-207ENST00000504805 PDIA6Q15084 440 aa9.32□□□□□ -0.92
RUFY3-207ENST00000504805 CCDC30Q5VVM6 783 aa9.32□□□□□ -0.92
RUFY3-207ENST00000504805 TSPYL6Q8N831 410 aa9.32□□□□□ -0.92
RUFY3-207ENST00000504805 SPDYE1Q8NFV5 336 aaPredicted RBP9.32□□□□□ -0.92
RUFY3-207ENST00000504805 STK31Q9BXU1 1019 aa9.32□□□□□ -0.92
RUFY3-207ENST00000504805 DDX21Q9NR30 783 aaKnown RBP eCLIP9.32□□□□□ -0.92
RUFY3-207ENST00000504805 MAP3K15Q6ZN16 1313 aa9.31□□□□□ -0.92
RUFY3-207ENST00000504805 ANXA1P04083 346 aa9.31□□□□□ -0.92
RUFY3-207ENST00000504805 EXOSC9Q06265 439 aaKnown RBP9.31□□□□□ -0.92
RUFY3-207ENST00000504805 PROSER3Q2NL68 480 aa9.31□□□□□ -0.92
RUFY3-207ENST00000504805 CLEC4GQ6UXB4 293 aa9.31□□□□□ -0.92
RUFY3-207ENST00000504805 BCL2L12Q9HB09 334 aa9.31□□□□□ -0.92
RUFY3-207ENST00000504805 HYPKQ9NX55 129 aa9.31□□□□□ -0.92
RUFY3-207ENST00000504805 RNF181Q9P0P0 153 aa9.31□□□□□ -0.92
RUFY3-207ENST00000504805 CARMIL3Q8ND23 1372 aa9.31□□□□□ -0.92
RUFY3-207ENST00000504805 FER1L6Q2WGJ9 1857 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 ERVV-1B6SEH8 477 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 PRELPP51888 382 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 SLFN5Q08AF3 891 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 AIMP1Q12904 312 aaKnown RBP9.3□□□□□ -0.92
RUFY3-207ENST00000504805 NFIXQ14938 502 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 TBC1D9BQ66K14 1250 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 BICDL1Q6ZP65 573 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 TTLL7Q6ZT98 887 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 LRP10Q7Z4F1 713 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 XAGE3Q8WTP9 111 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 ZBTB3Q9H5J0 574 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 PIM2Q9P1W9 311 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 CACNA1SQ13698 1873 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 KDM2BQ8NHM5 1336 aa9.3□□□□□ -0.92
RUFY3-207ENST00000504805 ARFGEF2Q9Y6D5 1785 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 NUP98P52948 1817 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 POLRMTO00411 1230 aaKnown RBP9.29□□□□□ -0.92
RUFY3-207ENST00000504805 NPHP1O15259 732 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 TM4SF1P30408 202 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 CHRNA5P30532 468 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 RASSF7Q02833 373 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 COPS6Q7L5N1 327 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 C16orf71Q8IYS4 520 aaPredicted RBP9.29□□□□□ -0.92
RUFY3-207ENST00000504805 SETDB2Q96T68 719 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 ANKRD36CQ5JPF3 1778 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 ZBED9Q6R2W3 1325 aa9.29□□□□□ -0.92
RUFY3-207ENST00000504805 ZC3H4Q9UPT8 1303 aaKnown RBP9.29□□□□□ -0.92
RUFY3-207ENST00000504805 SEMA3EO15041 775 aa9.28□□□□□ -0.92
RUFY3-207ENST00000504805 VAMP4O75379 141 aa9.28□□□□□ -0.92
RUFY3-207ENST00000504805 ZMYND10O75800 440 aa9.28□□□□□ -0.92
RUFY3-207ENST00000504805 DDX58O95786 925 aaKnown RBP9.28□□□□□ -0.92
RUFY3-207ENST00000504805 SERPINB2P05120 415 aa9.28□□□□□ -0.92
RUFY3-207ENST00000504805 HLFQ16534 295 aa9.28□□□□□ -0.92
RUFY3-207ENST00000504805 HSP90AB3PQ58FF7 597 aa9.28□□□□□ -0.92
RUFY3-207ENST00000504805 DALRD3Q5D0E6 543 aaKnown RBP9.28□□□□□ -0.92
RUFY3-207ENST00000504805 GIGYF2Q6Y7W6 1299 aaKnown RBP9.28□□□□□ -0.92
RUFY3-207ENST00000504805 CDCA7LQ96GN5 454 aa9.28□□□□□ -0.92
RUFY3-207ENST00000504805 RRAGCQ9HB90 399 aa9.28□□□□□ -0.92
RUFY3-207ENST00000504805 NIP7Q9Y221 180 aaKnown RBP eCLIP9.28□□□□□ -0.92
RUFY3-207ENST00000504805 TCERG1O14776 1098 aaKnown RBP9.27□□□□□ -0.93
RUFY3-207ENST00000504805 E2F4Q16254 413 aa9.27□□□□□ -0.93
RUFY3-207ENST00000504805 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
RUFY3-207ENST00000504805 NBPF5PQ86XG9 351 aaPredicted RBP9.27□□□□□ -0.93
RUFY3-207ENST00000504805 TNS4Q8IZW8 715 aa9.27□□□□□ -0.93
RUFY3-207ENST00000504805 CNBD1Q8NA66 436 aa9.27□□□□□ -0.93
RUFY3-207ENST00000504805 SMC1BQ8NDV3 1235 aa9.27□□□□□ -0.93
RUFY3-207ENST00000504805 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.93
RUFY3-207ENST00000504805 PHAXQ9H814 394 aaKnown RBP9.27□□□□□ -0.93
RUFY3-207ENST00000504805 PODXL2Q9NZ53 605 aa9.27□□□□□ -0.93
RUFY3-207ENST00000504805 IBTKQ9P2D0 1353 aaPredicted RBP9.26□□□□□ -0.93
RUFY3-207ENST00000504805 CT47B1P0C2W7 299 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms