RNA–Protein interactions for RNA: ENST00000504758.5

TCP11-219, Transcript of t-complex 11, human

TSL 1 (best)

Gene TCP11, Length 1,978 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCP11-219	ENST00000504758	CCDC93	Q567U6	631 aa		13.58	□□□□□ -0.24
TCP11-219	ENST00000504758	HDGFL1	Q5TGJ6	251 aa		13.58	□□□□□ -0.24
TCP11-219	ENST00000504758	POTEC	B2RU33	542 aa		13.58	□□□□□ -0.24
TCP11-219	ENST00000504758	DUSP27	Q5VZP5	1158 aa		13.58	□□□□□ -0.24
TCP11-219	ENST00000504758	SYNE4	Q8N205	404 aa		13.58	□□□□□ -0.24
TCP11-219	ENST00000504758	RBM46	Q8TBY0	533 aa	Known RBP	13.58	□□□□□ -0.24
TCP11-219	ENST00000504758	COL4A5	P29400	1685 aa		13.57	□□□□□ -0.24
TCP11-219	ENST00000504758	DDX60	Q8IY21	1712 aa	Known RBP	13.57	□□□□□ -0.24
TCP11-219	ENST00000504758	SOGA3	Q5TF21	947 aa		13.57	□□□□□ -0.24
TCP11-219	ENST00000504758	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.57	□□□□□ -0.24
TCP11-219	ENST00000504758	NLRP10	Q86W26	655 aa		13.56	□□□□□ -0.24
TCP11-219	ENST00000504758	HOXB7	P09629	217 aa		13.56	□□□□□ -0.24
TCP11-219	ENST00000504758	ALDH1B1	P30837	517 aa		13.56	□□□□□ -0.24
TCP11-219	ENST00000504758	HOXA10	P31260	410 aa	Predicted RBP	13.56	□□□□□ -0.24
TCP11-219	ENST00000504758	PARP10	Q53GL7	1025 aa		13.56	□□□□□ -0.24
TCP11-219	ENST00000504758	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.56	□□□□□ -0.24
TCP11-219	ENST00000504758	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.55	□□□□□ -0.24
TCP11-219	ENST00000504758	ELL2	O00472	640 aa	Predicted RBP	13.55	□□□□□ -0.24
TCP11-219	ENST00000504758	HTRA3	P83110	453 aa		13.55	□□□□□ -0.24
TCP11-219	ENST00000504758	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
TCP11-219	ENST00000504758	PPP1R42	Q7Z4L9	355 aa		13.55	□□□□□ -0.24
TCP11-219	ENST00000504758	RPGR	Q92834	1020 aa	Known RBP	13.55	□□□□□ -0.24
TCP11-219	ENST00000504758	UTP14A	Q9BVJ6	771 aa	Known RBP	13.55	□□□□□ -0.24
TCP11-219	ENST00000504758	IFT57	Q9NWB7	429 aa		13.55	□□□□□ -0.24
TCP11-219	ENST00000504758	DDN	O94850	711 aa	Predicted RBP	13.54	□□□□□ -0.24
TCP11-219	ENST00000504758	VEGFA	P15692	232 aa	Predicted RBP	13.54	□□□□□ -0.24
TCP11-219	ENST00000504758	TCIRG1	Q13488	830 aa		13.54	□□□□□ -0.24
TCP11-219	ENST00000504758	COL4A1	P02462	1669 aa		13.54	□□□□□ -0.24
TCP11-219	ENST00000504758	HCLS1	P14317	486 aa	Predicted RBP	13.54	□□□□□ -0.24
TCP11-219	ENST00000504758	C8orf58	Q8NAV2	365 aa		13.54	□□□□□ -0.24
TCP11-219	ENST00000504758	DBF4	Q9UBU7	674 aa	Predicted RBP	13.54	□□□□□ -0.24
TCP11-219	ENST00000504758	ZNF541	Q9H0D2	1346 aa		13.54	□□□□□ -0.24
TCP11-219	ENST00000504758	TCERG1	O14776	1098 aa	Known RBP	13.53	□□□□□ -0.24
TCP11-219	ENST00000504758	GNAI1	P63096	354 aa		13.53	□□□□□ -0.24
TCP11-219	ENST00000504758	SLC10A5	Q5PT55	438 aa		13.53	□□□□□ -0.24
TCP11-219	ENST00000504758	APLP1	P51693	650 aa		13.52	□□□□□ -0.24
TCP11-219	ENST00000504758	FSTL1	Q12841	308 aa		13.52	□□□□□ -0.24
TCP11-219	ENST00000504758	HSP90AB3P	Q58FF7	597 aa		13.52	□□□□□ -0.24
TCP11-219	ENST00000504758	DPY19L2	Q6NUT2	758 aa		13.52	□□□□□ -0.24
TCP11-219	ENST00000504758	RTKN2	Q8IZC4	609 aa		13.52	□□□□□ -0.24
TCP11-219	ENST00000504758	PLBD2	Q8NHP8	589 aa		13.52	□□□□□ -0.24
TCP11-219	ENST00000504758	CRAMP1	Q96RY5	1269 aa		13.52	□□□□□ -0.24
TCP11-219	ENST00000504758	SCN4A	P35499	1836 aa		13.52	□□□□□ -0.24
TCP11-219	ENST00000504758	ATP5J2-PTCD1	G3V325	749 aa		13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	POTEI	P0CG38	1075 aa		13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	POTEJ	P0CG39	1038 aa		13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	ANKRD13D	Q6ZTN6	518 aa		13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	DNAJC5G	Q8N7S2	189 aa		13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	TSPYL6	Q8N831	410 aa		13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	TSR2	Q969E8	191 aa	Known RBP	13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	NLRP3	Q96P20	1036 aa		13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	PHAX	Q9H814	394 aa	Known RBP	13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	MRS2	Q9HD23	443 aa		13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	TRMT112	Q9UI30	125 aa	Known RBP	13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	ABCC4	O15439	1325 aa		13.52	□□□□□ -0.25
TCP11-219	ENST00000504758	PPEF1	O14829	653 aa	Predicted RBP	13.51	□□□□□ -0.25
TCP11-219	ENST00000504758	IARS	P41252	1262 aa	Known RBP	13.51	□□□□□ -0.25
TCP11-219	ENST00000504758	RBM17	Q96I25	401 aa	Known RBP	13.51	□□□□□ -0.25
TCP11-219	ENST00000504758	ISCA1	Q9BUE6	129 aa		13.51	□□□□□ -0.25
TCP11-219	ENST00000504758	HYPK	Q9NX55	129 aa		13.51	□□□□□ -0.25
TCP11-219	ENST00000504758	RNF123	Q5XPI4	1314 aa		13.51	□□□□□ -0.25
TCP11-219	ENST00000504758	CALD1	Q05682	793 aa	Known RBP	13.51	□□□□□ -0.25
TCP11-219	ENST00000504758	SMC1B	Q8NDV3	1235 aa		13.51	□□□□□ -0.25
TCP11-219	ENST00000504758	PSMD1	Q99460	953 aa		13.51	□□□□□ -0.25
TCP11-219	ENST00000504758	LRRC37A	A6NMS7	1700 aa		13.5	□□□□□ -0.25
TCP11-219	ENST00000504758	WWC1	Q8IX03	1113 aa		13.5	□□□□□ -0.25
TCP11-219	ENST00000504758	SH3TC1	Q8TE82	1336 aa		13.5	□□□□□ -0.25
TCP11-219	ENST00000504758	LTBP1	Q14766	1721 aa		13.49	□□□□□ -0.25
TCP11-219	ENST00000504758	RTL5	Q5HYW3	569 aa	Predicted RBP	13.49	□□□□□ -0.25
TCP11-219	ENST00000504758	FAM89A	Q96GI7	184 aa		13.49	□□□□□ -0.25
TCP11-219	ENST00000504758	DUOX1	Q9NRD9	1551 aa		13.49	□□□□□ -0.25
TCP11-219	ENST00000504758	FZD9	O00144	591 aa		13.49	□□□□□ -0.25
TCP11-219	ENST00000504758	ANP32C	O43423	234 aa		13.49	□□□□□ -0.25
TCP11-219	ENST00000504758	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.49	□□□□□ -0.25
TCP11-219	ENST00000504758	ADAMTSL1	Q8N6G6	1762 aa		13.48	□□□□□ -0.25
TCP11-219	ENST00000504758	CCDC27	Q2M243	656 aa		13.48	□□□□□ -0.25
TCP11-219	ENST00000504758	CC2D2B	Q6DHV5	1058 aa		13.48	□□□□□ -0.25
TCP11-219	ENST00000504758	ATP6V0A2	Q9Y487	856 aa		13.48	□□□□□ -0.25
TCP11-219	ENST00000504758	RIC3	Q7Z5B4	369 aa		13.46	□□□□□ -0.25
TCP11-219	ENST00000504758	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.46	□□□□□ -0.25
TCP11-219	ENST00000504758	SALL2	Q9Y467	1007 aa	Predicted RBP	13.46	□□□□□ -0.25
TCP11-219	ENST00000504758	GOLGA2	Q08379	1002 aa		13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	TRIM28	Q13263	835 aa	Known RBP	13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	AOC3	Q16853	763 aa		13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	LARGE2	Q8N3Y3	721 aa		13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	MYD88	Q99836	296 aa		13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	GRAP	Q13588	217 aa		13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	DDX46	Q7L014	1031 aa	Known RBP	13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	GRAPL	Q8TC17	118 aa	Predicted RBP	13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	JDP2	Q8WYK2	163 aa		13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	JARID2	Q92833	1246 aa	Predicted RBP	13.45	□□□□□ -0.26
TCP11-219	ENST00000504758	BBOX1	O75936	387 aa		13.44	□□□□□ -0.26
TCP11-219	ENST00000504758	CCDC30	Q5VVM6	783 aa		13.44	□□□□□ -0.26
TCP11-219	ENST00000504758	CHADL	Q6NUI6	762 aa		13.44	□□□□□ -0.26
TCP11-219	ENST00000504758	GPC2	Q8N158	579 aa		13.44	□□□□□ -0.26
TCP11-219	ENST00000504758	CELF1	Q92879	486 aa	Known RBP	13.44	□□□□□ -0.26
TCP11-219	ENST00000504758	FANCI	Q9NVI1	1328 aa		13.44	□□□□□ -0.26
TCP11-219	ENST00000504758	MYH3	P11055	1940 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	IQCA1L	A6NCM1	817 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	IRS4	O14654	1257 aa	Predicted RBP	13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms