RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 SOGA3Q5TF21 947 aa23.37■■□□□ 1.33
SH3TC1-208ENST00000504223 TSPYL6Q8N831 410 aa23.37■■□□□ 1.33
SH3TC1-208ENST00000504223 FAM9BQ8IZU0 186 aa23.36■■□□□ 1.33
SH3TC1-208ENST00000504223 TAOK3Q9H2K8 898 aa23.36■■□□□ 1.33
SH3TC1-208ENST00000504223 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
SH3TC1-208ENST00000504223 PPP1R42Q7Z4L9 355 aa23.35■■□□□ 1.33
SH3TC1-208ENST00000504223 DBF4Q9UBU7 674 aaPredicted RBP23.35■■□□□ 1.33
SH3TC1-208ENST00000504223 SALL2Q9Y467 1007 aaPredicted RBP23.35■■□□□ 1.33
SH3TC1-208ENST00000504223 TOMM70O94826 608 aa23.34■■□□□ 1.33
SH3TC1-208ENST00000504223 ALDH1B1P30837 517 aa23.34■■□□□ 1.33
SH3TC1-208ENST00000504223 HSP90AB3PQ58FF7 597 aa23.34■■□□□ 1.33
SH3TC1-208ENST00000504223 C3orf67Q6ZVT6 689 aa23.34■■□□□ 1.33
SH3TC1-208ENST00000504223 HOXA10P31260 410 aaPredicted RBP23.33■■□□□ 1.33
SH3TC1-208ENST00000504223 CCDC93Q567U6 631 aa23.33■■□□□ 1.33
SH3TC1-208ENST00000504223 OLFM4Q6UX06 510 aa23.33■■□□□ 1.33
SH3TC1-208ENST00000504223 NLRP10Q86W26 655 aa23.33■■□□□ 1.33
SH3TC1-208ENST00000504223 SNED1Q8TER0 1413 aa23.33■■□□□ 1.32
SH3TC1-208ENST00000504223 RNF123Q5XPI4 1314 aa23.33■■□□□ 1.32
SH3TC1-208ENST00000504223 LAMB2P55268 1798 aa23.32■■□□□ 1.32
SH3TC1-208ENST00000504223 GLTPD2A6NH11 291 aa23.32■■□□□ 1.32
SH3TC1-208ENST00000504223 TCIRG1Q13488 830 aa23.32■■□□□ 1.32
SH3TC1-208ENST00000504223 SLC10A5Q5PT55 438 aa23.32■■□□□ 1.32
SH3TC1-208ENST00000504223 UTP14AQ9BVJ6 771 aaKnown RBP23.32■■□□□ 1.32
SH3TC1-208ENST00000504223 PHAXQ9H814 394 aaKnown RBP23.32■■□□□ 1.32
SH3TC1-208ENST00000504223 RRAGCQ9HB90 399 aa23.32■■□□□ 1.32
SH3TC1-208ENST00000504223 IL16Q14005 1332 aa23.32■■□□□ 1.32
SH3TC1-208ENST00000504223 SYNE4Q8N205 404 aa23.31■■□□□ 1.32
SH3TC1-208ENST00000504223 PLBD2Q8NHP8 589 aa23.31■■□□□ 1.32
SH3TC1-208ENST00000504223 ZNF428Q96B54 188 aa23.31■■□□□ 1.32
SH3TC1-208ENST00000504223 HYPKQ9NX55 129 aa23.31■■□□□ 1.32
SH3TC1-208ENST00000504223 DICER1Q9UPY3 1922 aaKnown RBP23.31■■□□□ 1.32
SH3TC1-208ENST00000504223 HSPA6P17066 643 aa23.3■■□□□ 1.32
SH3TC1-208ENST00000504223 SLC51AQ86UW1 340 aa23.3■■□□□ 1.32
SH3TC1-208ENST00000504223 SPINK5Q9NQ38 1064 aaPredicted RBP23.3■■□□□ 1.32
SH3TC1-208ENST00000504223 FKBP4Q02790 459 aaKnown RBP eCLIP23.29■■□□□ 1.32
SH3TC1-208ENST00000504223 ANKRD13DQ6ZTN6 518 aa23.29■■□□□ 1.32
SH3TC1-208ENST00000504223 RPGRQ92834 1020 aaKnown RBP23.29■■□□□ 1.32
SH3TC1-208ENST00000504223 FANCIQ9NVI1 1328 aa23.29■■□□□ 1.32
SH3TC1-208ENST00000504223 RBM46Q8TBY0 533 aaKnown RBP23.28■■□□□ 1.32
SH3TC1-208ENST00000504223 CRAMP1Q96RY5 1269 aa23.28■■□□□ 1.32
SH3TC1-208ENST00000504223 ISCA1Q9BUE6 129 aa23.28■■□□□ 1.32
SH3TC1-208ENST00000504223 DDX60Q8IY21 1712 aaKnown RBP23.28■■□□□ 1.32
SH3TC1-208ENST00000504223 RTKN2Q8IZC4 609 aa23.27■■□□□ 1.32
SH3TC1-208ENST00000504223 NLRP3Q96P20 1036 aa23.27■■□□□ 1.32
SH3TC1-208ENST00000504223 ATP5J2-PTCD1G3V325 749 aa23.26■■□□□ 1.31
SH3TC1-208ENST00000504223 TCERG1O14776 1098 aaKnown RBP23.26■■□□□ 1.31
SH3TC1-208ENST00000504223 WDR63Q8IWG1 891 aa23.26■■□□□ 1.31
SH3TC1-208ENST00000504223 RBM17Q96I25 401 aaKnown RBP23.26■■□□□ 1.31
SH3TC1-208ENST00000504223 C16orf71Q8IYS4 520 aaPredicted RBP23.25■■□□□ 1.31
SH3TC1-208ENST00000504223 ZNF277Q9NRM2 450 aaPredicted RBP23.25■■□□□ 1.31
SH3TC1-208ENST00000504223 TRMT112Q9UI30 125 aaKnown RBP23.25■■□□□ 1.31
SH3TC1-208ENST00000504223 WDR90Q96KV7 1748 aa23.25■■□□□ 1.31
SH3TC1-208ENST00000504223 TAF1P21675 1872 aa23.24■■□□□ 1.31
SH3TC1-208ENST00000504223 POTECB2RU33 542 aa23.24■■□□□ 1.31
SH3TC1-208ENST00000504223 TWISTNBQ3B726 338 aaPredicted RBP23.24■■□□□ 1.31
SH3TC1-208ENST00000504223 DPY19L2Q6NUT2 758 aa23.24■■□□□ 1.31
SH3TC1-208ENST00000504223 PSMD1Q99460 953 aa23.24■■□□□ 1.31
SH3TC1-208ENST00000504223 SH3TC1Q8TE82 1336 aa23.24■■□□□ 1.31
SH3TC1-208ENST00000504223 HCLS1P14317 486 aaPredicted RBP23.23■■□□□ 1.31
SH3TC1-208ENST00000504223 VEGFAP15692 232 aaPredicted RBP23.23■■□□□ 1.31
SH3TC1-208ENST00000504223 CCDC30Q5VVM6 783 aa23.23■■□□□ 1.31
SH3TC1-208ENST00000504223 CC2D2BQ6DHV5 1058 aa23.23■■□□□ 1.31
SH3TC1-208ENST00000504223 PPEF1O14829 653 aaPredicted RBP23.22■■□□□ 1.31
SH3TC1-208ENST00000504223 TRIM28Q13263 835 aaKnown RBP23.22■■□□□ 1.31
SH3TC1-208ENST00000504223 ZNF521Q96K83 1311 aa23.22■■□□□ 1.31
SH3TC1-208ENST00000504223 GOLGA2Q08379 1002 aa23.21■■□□□ 1.31
SH3TC1-208ENST00000504223 FSTL1Q12841 308 aa23.21■■□□□ 1.31
SH3TC1-208ENST00000504223 G2E3Q7L622 706 aa23.21■■□□□ 1.31
SH3TC1-208ENST00000504223 ABCC4O15439 1325 aa23.21■■□□□ 1.31
SH3TC1-208ENST00000504223 COL4A1P02462 1669 aa23.2■■□□□ 1.3
SH3TC1-208ENST00000504223 IARSP41252 1262 aaKnown RBP23.2■■□□□ 1.3
SH3TC1-208ENST00000504223 EXOSC9Q06265 439 aaKnown RBP23.2■■□□□ 1.3
SH3TC1-208ENST00000504223 RIC3Q7Z5B4 369 aa23.2■■□□□ 1.3
SH3TC1-208ENST00000504223 CACNA1FO60840 1977 aa23.2■■□□□ 1.3
SH3TC1-208ENST00000504223 DDNO94850 711 aaPredicted RBP23.19■■□□□ 1.3
SH3TC1-208ENST00000504223 GRIPAP1Q4V328 841 aa23.19■■□□□ 1.3
SH3TC1-208ENST00000504223 FAM89AQ96GI7 184 aa23.19■■□□□ 1.3
SH3TC1-208ENST00000504223 CHMP4AQ9BY43 222 aa23.19■■□□□ 1.3
SH3TC1-208ENST00000504223 VAMP4O75379 141 aa23.18■■□□□ 1.3
SH3TC1-208ENST00000504223 MYD88Q99836 296 aa23.18■■□□□ 1.3
SH3TC1-208ENST00000504223 ATP6V0A2Q9Y487 856 aa23.18■■□□□ 1.3
SH3TC1-208ENST00000504223 COL4A5P29400 1685 aa23.18■■□□□ 1.3
SH3TC1-208ENST00000504223 ZNF541Q9H0D2 1346 aa23.17■■□□□ 1.3
SH3TC1-208ENST00000504223 APLP1P51693 650 aa23.17■■□□□ 1.3
SH3TC1-208ENST00000504223 RTL5Q5HYW3 569 aaPredicted RBP23.17■■□□□ 1.3
SH3TC1-208ENST00000504223 SMC1BQ8NDV3 1235 aa23.17■■□□□ 1.3
SH3TC1-208ENST00000504223 FZD9O00144 591 aa23.16■■□□□ 1.3
SH3TC1-208ENST00000504223 L3MBTL3Q96JM7 780 aaPredicted RBP23.16■■□□□ 1.3
SH3TC1-208ENST00000504223 METTL22Q9BUU2 404 aaPredicted RBP23.16■■□□□ 1.3
SH3TC1-208ENST00000504223 MAP3K2Q9Y2U5 619 aa23.16■■□□□ 1.3
SH3TC1-208ENST00000504223 BBOX1O75936 387 aa23.15■■□□□ 1.3
SH3TC1-208ENST00000504223 STK31Q9BXU1 1019 aa23.15■■□□□ 1.3
SH3TC1-208ENST00000504223 PI4KAP2A4QPH2 592 aa23.14■■□□□ 1.29
SH3TC1-208ENST00000504223 SLC4A2P04920 1241 aa23.14■■□□□ 1.29
SH3TC1-208ENST00000504223 GRAPQ13588 217 aa23.14■■□□□ 1.29
SH3TC1-208ENST00000504223 SF3B3Q15393 1217 aaKnown RBP23.14■■□□□ 1.29
SH3TC1-208ENST00000504223 KSR2Q6VAB6 950 aa23.14■■□□□ 1.29
SH3TC1-208ENST00000504223 DDX46Q7L014 1031 aaKnown RBP23.14■■□□□ 1.29
SH3TC1-208ENST00000504223 PI4KAP1Q8N8J0 262 aa23.14■■□□□ 1.29
SH3TC1-208ENST00000504223 GRAPLQ8TC17 118 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms